Ictalurus punctatus (channel catfish): 108269128
Help
Entry
108269128 CDS
T04658
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108269128
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108269128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
108269128
NCBI-ProteinID:
XP_017330208
Ensembl:
ENSIPUG00000014592
UniProt:
A0A2D0RI52
LinkDB
All DBs
Position
8:24267725..24530955
Genome browser
AA seq
1261 aa
AA seq
DB search
MDLFELDFFREWELEQQCHYEQDRSALKKKEWERRTQEVQQDEDLFSTGFNLFGEPYKTN
KGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPVEKTDQPSFFTEAQRG
RATSSQPANHTTSMPPPPTTNMAGPSILHGHQGTKKSRSSDWSRGAHGSGSSQAAQAASR
GKQSSSGHEQEQGDSSPGTSSTSTHPSRRHGQPAKVPTVASSPCEQDSGSPVASTSLVPG
GLSTPTFPQGLHCKPSSVGQQKPTAYVRPMDGQDQAPNDSPELKPTLEITDGYGGTPFTS
LMDGKGGTVGSKGKLPKLTLPQSGEVSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKAE
QTKFPIPNKDPQHVTPAYNGQKRCNVPGNKPSTKPVPQKSMLEDDLKISSDEEDNEQAAE
KPKTRSTPPNLPGPTPRSSDPGGHSSGASGSSSESESSSESDSDSESSSSDSECNRASRA
TTPEPEPPSTNKWQLDKWLNKVNPHNKPLANTQTESHGIRSSQPEDGQATENQSCSKSKP
SAALAQADPKDRALLSPIREKAKPKTGQKGPDGKGTKVKAPVSVDLPLSRRSTGKKQPKK
VEQSSSSEEHNWPRPVNSSTTPKEKEPPPLEPPKPRGKAPGGKTAPRKEPRSTTVTTPAA
PTTSAISTAPDKKKHRGPSKIIPKSKEFIETESSSSECHSDPEELSKVHLPCPGPSSLNF
KSKDCNSNILSVSSLASTSSTSIPDPAATDLLEEPLFSPISMVQNELLSPLRDFEDIKSL
WVKIELSLLSRIPGQDPPEPLPTKAECRETSFKHRRQQSPASIPSEKPTSKSKRKHKSDH
CEVLSGTKKLKLEKEALLLPPCISPIHNHKVSNTKDSSKKQPRKLLPPLLSPLSDEPMGR
QRRSSESSSLSMEGSTAVPTTLPPTHSLPPSSSSSSSSSSSSHKHRKGESKSHSKTSSQE
EDSHAKTSGGFHANGQSESNTWPNPSALSMENMEHRRPKLMFNNTVHNADYYMQEAKKLK
HKADALIEKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNF
TSHSATLPEKKLAVLCNRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNSAKSSQAPSPWG
SNGKTTGTPSPMSLSPSPISSVNSNTGAMLSSSSSSSSSSGSVAIPQRIHHMAASHVNIT
NNILRSYEHWDTADKLAHESQEFFQELDSVMEPLTQHSSMTDLVRYIRQGLHWLRIEAHL
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagctggacttcttcagggagtgggagctggagcagcaatgccattat
gagcaggaccgttcagcgctgaagaagaaggaatgggagcgtcgcacacaggaagtgcag
caggatgaagatttgttctccaccggcttcaatctgttcggtgagccgtacaagaccaac
aaaggtgatgccctggccaaccgagtccagaacacattgggtaactatgacgagatgaag
gaactcttgaccagccattccaaccaaagccacttggtgggcatccctaagaactcagtt
ccccagaccccagtggagaaaacggaccagcccagcttcttcaccgaagctcagcgtggc
agagccacttcatcccagccagcgaaccacacaacttccatgcctcctccacctaccacc
aacatggcagggcccagcatcctccacgggcatcagggcaccaaaaagtcccgttcctct
gactggtcccgaggagcacatggttcgggcagcagccaggcagctcaggctgccagccgg
ggaaagcagagctccagtgggcatgaacaggaacagggtgactcgagccctggcacttcg
tccacttccacacaccccagcaggaggcatgggcagccagccaaggtgccaactgtcgcc
agctcaccctgcgagcaagactcagggtcacctgtggcctctacttctctggtgcccggt
ggtctgtccacaccaacattcccccagggcctgcactgcaagcccagcagcgtaggacag
cagaaacccacagcctatgtccggcccatggacggccaggaccaggcacccaatgactct
cctgagctcaagcctactctggaaatcacggatggatatggtggaacgccatttacaagc
ctgatggatggcaaaggcggcacagtggggagcaagggcaaacttcccaagctgactctc
cctcaatcaggggaggtcagtctgcccaatgactccagctgtgtggaggagattttgcgg
gaaatgacccattcctggcctcctcccctcactgccatacacacaccaggcaaagcagaa
cagaccaagtttcccattcccaacaaggacccccaacacgtaacaccagcgtacaatgga
caaaagcgctgcaacgttcctggtaacaagccctcgaccaagccagttccacagaagtca
atgctggaagatgacttgaagatcagcagtgatgaagaagacaatgaacaggctgcagag
aaacccaaaaccaggagcacacctccaaaccttccagggcccacaccacggagcagtgat
ccaggtggccactccagcggggcttctgggagttccagcgaatcagaaagcagctctgag
tctgactctgacagcgagagcagttccagtgacagcgaatgcaaccgagcatcccgcgcc
actacaccagagcctgaaccaccatcaacaaacaagtggcagctggataaatggttgaac
aaagtcaaccctcacaataagcccctggccaacacacagacagaaagccatggaattaga
agctctcagcctgaggacggccaagctacagagaaccaaagctgtagtaagagcaagccc
agtgcagctctggcacaagcagaccccaaagaccgggccttgctcagtcccatccgagaa
aaggccaagcctaaaacaggccagaaaggtcctgatggtaagggtaccaaagtgaaggcc
ccagtttcagttgatctgcctctttccaggagaagcacaggcaagaaacaaccgaagaaa
gtcgaacagtcctcaagcagtgaggagcacaactggcccagacctgtcaactccagcact
acaccaaaggagaaagaacctccacctttagaaccacccaaacctagaggcaaggcccca
gggggcaagactgcccccagaaaggaaccccgatccactacagtaaccacacctgctgcc
cccaccacctctgctatcagcacagctccagacaagaagaagcacagagggcctagtaag
atcatccccaagtcgaaggagtttattgaaacagagtcgtcctcatcagagtgccactcg
gaccctgaggagctttcaaaagtgcatcttccctgccctggtcctagcagcctgaacttt
aaatccaaggactgtaacagcaatatcctgagtgtcagcagtcttgccagcaccagcagt
acctccataccagacccagctgccactgacctgctggaggagcccctgttctcccccatc
tccatggtacagaatgagctgctgtcaccactgcgagactttgaggacattaagtccctg
tgggttaagattgagctcagtctcctgtcacggattcctgggcaggatccacctgagccg
ctccctaccaaggctgagtgtcgagagaccagcttcaagcacaggagacagcagtcaccc
gcctccattccatcagagaaacccaccagcaagtcaaagaggaaacacaagtcagatcat
tgtgaggtgttgagtgggacgaagaagttaaaactggagaaagaggccctgctcctccct
ccttgtatctctcccatccacaaccacaaagtctccaacacaaaagactcttcaaagaag
cagccgaggaagctccttccgccgctgctctccccgttgtcggacgagcccatgggtcgc
caacgaagaagcagcgagagcagttctctcagtatggaaggaagcacagctgttcccaca
accttacccccaacacactcccttccaccttcatcctcttcgtcttcgtcatcctcttcg
tcgtctcacaagcaccgcaaaggagagagcaagtctcactccaaaaccagcagccaggag
gaagacagccatgcaaagacctccgggggtttccatgccaatggtcagtccgaatcgaac
acgtggccgaacccttcagctctgtctatggagaatatggagcacaggagacctaaactc
atgttcaacaacactgttcataatgcggactactacatgcaggaagccaagaaactaaag
cacaaagctgatgcgctgatagagaagtttggcaaagcggtcaattacgcagacggtgca
ctctccttcatcgaatgcggcaatgctatggaacgagacccgttagaggccaagtcgccg
tacaccatgtactcggaaactgttgagctcattaggtatgcaatgagattaaagaacttc
accagtcactcagccacgctgccggagaagaaattagcggtgctgtgcaatcggtgttta
tccctgctgtacttgcggatgttcaaactgaaaaaggatcatgcgatgaagtattcacgc
tccttgatggagtacttcaagaattcggcgaaaagttctcaagcaccttcaccgtggggc
tccaatggaaagactactggaacaccatctcccatgtccctgagtccctcccccatcagc
tcggtcaacagcaacaccggagccatgctttcttcctcctcgtcctcttcctcatcctcg
ggcagtgtggccatcccgcagcgcatccaccacatggccgccagccacgtcaatatcacc
aacaacatcctgcgcagctatgagcactgggacacggccgacaagctggcccacgagagc
caagagttctttcaggagttggactcggtgatggagccactgacgcagcacagcagcatg
actgacctggtacgctacatccgccaaggactgcactggctccgcatcgaggcccatttg
ttatag
DBGET
integrated database retrieval system
