Ictalurus punctatus (channel catfish): 108269267
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Entry
108269267 CDS
T04658
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108269267 (rnf20)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108269267 (rnf20)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108269267 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
BRE1
zf-RING_5
zf-RING_2
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108269267
NCBI-ProteinID:
XP_017330514
Ensembl:
ENSIPUG00000014855
UniProt:
A0A2D0RJ06
LinkDB
All DBs
Position
8:complement(24657017..24668289)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSAQKRPCDPSSSAGAPPEKRRDRDGGDGGEGLSTGASNAVETVIKLGGVSNSEEQDIKA
LQVKNRKLGDALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDENMRLIARH
YDQSGSQPVDSQPGEGRSLKPGTPEPDGDSNQERAKDRGPQGEGVSSFLAMLASSSTEEM
EAELQERVESSRKQASCVVEICESLKSTVDQLKKDQDSDADGSLLEIAARLNTLLANENE
RLRQLTDDLKQKHSHMTSESRSLARAASRADNRISELQVSIEELQWDTEKIRRRENRLNT
HLGEVLERLNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELADNRLSELQKLQQ
DLHTVVQENNNMKMELMCRAEGLVRETAEYRCLQSQFSVLYNESLGLKAQLDETRARLNT
TRAARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGP
INREMRHLISTLQTHNQQMKGEVVKFKLRLREAQQELNQLRAAKGNPAVQSQSSTEMDVK
EEPASILTSAASDVTVKAGPDNDPSTPTTTGVSVKTEPGTEPEGAIKEEEKEKDKEEKKE
KEKDQKERERLSRVAVKEEKEKPGTSSSQSDDTPAERCAVIGGPKRKEVEQLKIVRVELK
KAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKAEAEELRQRLRDLEERERREGKK
MADEEALRKIRLVEDQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLMQQLR
EKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKERLLQG
TISAAERELALRTQALDMNKRKAQESATLSEDLRAQLEGVQQRLKEVREEVIENSISREK
ESFNARRAQEDISKLRRKIEKAKKPAESMRNGDEILNEEINEYKARLTCPCCNSRVKDAV
LTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagaagcggccgtgtgatcccagcagctccgctggtgctccgcctgagaaa
aggagagaccgagacggaggagacggaggcgagggtctcagcaccggagcaagcaatgcc
gtagagacggtcatcaaactgggtggcgtgtccaactcggaggaacaggatattaaagca
ctgcaggtgaaaaacagaaagttgggagatgccttggaccaaagacaggttatagaagat
gaattgagggaacgagtggaaaggcttgagactcgccaggctactgatgacgctagctta
ctcatccttaacagatactggaaccagtttgacgagaatatgaggttgatcgctcgccac
tatgaccaatcaggaagccagccagtggacagtcagccaggcgaggggcggagcctaaag
ccagggacaccggagccggatggggattctaatcaggagagagcaaaggacagaggtccg
caaggagaaggagtgagctcgtttctcgccatgctggctagtagtagcactgaggaaatg
gaggcggagctacaggagagggtggagtccagccgtaaacaggccagttgtgtggtagag
atttgcgagagcttaaagagcaccgtagatcaacttaagaaggaccaggattccgacgca
gacggtagcctcttggaaattgctgctcgattaaacaccttactggccaatgagaacgaa
cgccttcgtcagctgacagatgacctcaaacaaaaacatagtcacatgaccagtgagtct
cgttccctggcgcgtgctgctagtcgtgctgataacagaataagtgaacttcaggtgtca
atagaggaactgcagtgggacacggagaagatccgccgcagggaaaaccgtctcaacaca
catctgggggaggtgctggagaggctaaacagtaaaggctataaagtatgcggcgaggcc
agcagtgtgtgtgggaccatcactatcaacaagaggaagttcgaggagatgaacagcgag
ttggaggagaacagggagctggcagacaaccgtcttagcgagctgcagaaactacagcag
gacctgcacaccgtcgtccaggagaacaacaacatgaagatggagctcatgtgcagggcc
gagggattggtgagagagacggcagagtatcggtgtctgcagtcccagttctctgtgctt
tataacgaatctctggggctgaaggcccagctggatgagaccagagctcgcctgaacaca
accagagccgcccgccttcgccaactcgaccacatggagaacgatgaggtgtctctgcag
cgtaaagttcgtaccgaagtgattcagctggaggacacgctggctcaagtgcgcaaggag
tacgagatgctgaggattgagtttgagcaaacgctcgccgccaacgagcaagcaggccca
ataaatcgcgagatgcgtcaccttatcagcacgttgcagacgcataaccagcagatgaag
ggagaggttgtcaaattcaaactccgactcagagaggcccagcaagagctcaaccagctg
cgtgctgcaaagggtaaccctgccgtccaatcacaatcaagcacagagatggatgtaaaa
gaagagcccgcctccattttaacgtctgctgcctctgatgtcacagtgaaagcggggcca
gataacgacccgtccacacccactaccactggagtttcagttaagactgagcctggaact
gaacctgaaggtgcaataaaagaagaagagaaggagaaagacaaagaggagaagaaggaa
aaagagaaagatcagaaagagagagagaggttaagtcgcgtggcagtgaaagaggagaag
gagaaaccaggcactagcagcagccaatcagacgacacaccggctgaacgctgcgctgtg
atcggagggccaaagagaaaggaagtggagcagctgaaaatcgtcagggtggagcttaag
aaagcccaagagtctcagagagagatgaagctcttgctagacatgtatcgctctgcccca
aaggaacagagggacaaagtgcaactgatggctgcagagaaaaagaccaaagctgaggca
gaggagctacgtcagcgcctgcgggatctggaggagagggagaggagggaaggaaagaag
atggctgatgaggaagctctgagaaagatccgcttagtagaggatcagattgacatcctc
aacaagaagctctcccttgccaagcaggaggaggacgccttgctgagcgagatggacgtc
accggacaggccttcgaggacatgcaggaacagaacatccgcttgatgcagcagctccgc
gagaaggacgacgccaacttcaagctcatgagtgagcgcattaaatccaaccagatccac
aagctcctgaaagaagaaaaagaagagctggccgaccaactgctcacactgaaaacacag
gtggatgctcagctgcaggttgtgaggaagctggaggagaaagagcgcctcctgcagggc
accattagtgctgcagagagagagctggctctacgcacacaagccctggacatgaacaag
cgcaaggcccaagagtctgcaacgctgtcggaggatttacgggctcagctggaaggagtg
cagcagagactgaaagaagtccgtgaggaggtgatcgagaacagcatctccagggagaaa
gagtctttcaatgcccgccgtgcacaggaggacatatccaaactgcgcaggaagattgag
aaagccaagaaacccgccgagagcatgcgcaacggcgacgagatacttaacgaggaaatt
aacgaatacaaggcccgattgacgtgtccgtgctgcaactctcgcgtaaaggacgccgtg
ctgacaaagtgcttccacgtcttctgcttcgagtgcgtgaagacgcgttacgatacgcgc
cagaggaagtgcccgaagtgcaacgccgccttcggcgccaacgatttccaccgcatctac
atcggatag
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integrated database retrieval system
