Ictalurus punctatus (channel catfish): 108269441
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Entry
108269441 CDS
T04658
Name
(RefSeq) steroid hormone receptor ERR2 isoform X1
KO
K08553
estrogen-related receptor beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269441
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108269441
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108269441
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108269441
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108269441
Nuclear receptors [BR:
ipu03310
]
3. Estrogen like
3B. Estrogen-related receptor
108269441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108269441
NCBI-ProteinID:
XP_017330809
Ensembl:
ENSIPUG00000007762
UniProt:
A0A2D0RJV3
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Position
9:21664826..21725979
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AA seq
475 aa
AA seq
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MDVSELCIPDPLSYHNQASLSHSLATQKEPSRFWLLNRMAAEERHLPSSCGSYIKTEPSS
PSSLVDTASHPSPGAHSDASGGYGSAIHSHSNGLDSPPMFTPAGPLGAAGSGCRKRYDDC
SSTLLDDSGPIKCEYMLNSIPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS
CPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDTENSAYLG
LTLPPPAKKPLTKIVSHLLVAEPEKIYAMPDPTMPESDIKALTTLCDLADRELVVIIGWA
KHIPGFSSLSLGDQMSLLQSAWMEILILSIVFRSLPYEDELVYAEDYVMDEEHSRLTGLL
DLFVSILQLVRKYKKLKVEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDALHEALQDYE
NSQHTEDPRRAGKLLMTLPLLRQTATKAVQHFYSIKVQGKVPMHKLFLEMLEAKV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcagaactttgcatccccgatcctctcagctatcataaccaggcctccttg
tcccattctctggccactcagaaggagccctctcgcttctggctgttgaacaggatggcc
gctgaggagcggcacctgccctccagctgtggctcatacataaagacagagccgtctagt
ccgtcttcactggtggacacggccagccacccgagtcccggggcgcactccgacgccagc
ggtggctacggcagtgccatccacagccactccaacggcctcgactctccgcccatgttc
acgccggcaggtcccctcggcgcagcgggcagcggctgccgcaagcgctatgacgactgc
tccagcacgttgctcgacgactcgggcccaatcaaatgcgagtacatgctcaactccatc
cccaaacggctgtgtctggtatgcggagacatcgcttctggctatcactatggtgtggcc
tcctgcgaggcctgcaaagccttcttcaaaaggaccatacaaggtaacatcgagtacagc
tgcccagccaccaacgagtgcgagatcacgaagcgaagacgcaagtcctgtcaagcctgc
cgcttcatgaagtgtctgaaagtcggcatgctgaaggaaggtgttcgtcttgatcgtgtc
cgaggaggcaggcaaaagtataagaggaggattgacacagagaacagcgcctacctgggc
ctcaccctaccacctccagcaaagaaaccattgacaaagatcgtgtcccacctgctggta
gcagagccagagaagatctatgccatgccagatcccaccatgcccgagagtgacatcaag
gcactcaccacgctgtgtgatctcgccgaccgcgagctggtcgtcatcatcggctgggcc
aagcatatcccaggtttttccagcttgtctctgggagatcagatgagtctactgcagagt
gcttggatggagattctgatcctgagcatcgtcttccgctcgctgccctacgaggacgag
ctggtttacgccgaggactatgtgatggacgaagagcactcccggctcacgggcctgctg
gacctctttgtctccatcctccagctcgtccgcaagtacaagaagctgaaggtggagaag
gaggagtttgtcacactcaaggccatcgctctcgccaactcagactccatgcacatagag
gacgtggaggcggttcagaagctgcaggacgctctccatgaagcgctgcaggactatgag
aacagccaacacacagaggacccgcggagggccggaaagctgctcatgaccctgcccctg
ctgcggcagaccgccactaaggccgttcaacacttctacagcatcaaggtgcagggcaaa
gtgcccatgcacaaactcttcctggaaatgctggaggccaaggtgtga
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