Ictalurus punctatus (channel catfish): 108270249
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Entry
108270249 CDS
T04658
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108270249
03036 Chromosome and associated proteins [BR:
ipu03036
]
108270249
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108270249
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108270249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Hanta_Gc_C
Motif
Other DBs
NCBI-GeneID:
108270249
NCBI-ProteinID:
XP_017332218
Ensembl:
ENSIPUG00000015981
UniProt:
W5UID9
LinkDB
All DBs
Position
9:29179134..29256727
Genome browser
AA seq
1345 aa
AA seq
DB search
MEQDDFPPPPPDVLDEEEGESFEFDDEAPEAERPPSFPPALDFDSSGCPVLENAEADLPP
PPPPQTCSSAPHGQFPPPPEEGHGADKELPPPPEGADTQGNPGSRRKVNPYSVIDISPDS
PPPLFSPANGNEADAQDVPSSPIVPSGYMVPVPCGYASPSNVPIITPAYTTPVIIRHFSV
DEEVSIVGAGPTLTDSVFTVDHPAIREEDALAKWASDPANTAWMENPDEVIYDDVPRENS
GSTTDVDEMIYDDVELGEEGGSSSVENGWSSSEFESYDEESDGEGGHGENGVLPNAFIRR
HTPSTKTHLSQDLTRLKEHYERKVKDLMVNAVGAVELQQLRHKHEQKMQKLVRAAKHGTK
DGLEKTKAAVKKGKSFIRTKSFGHERKASCFEEEPSELFIEVECLNVEPVLGPAPEGLSQ
QQVVRRCILESILESEKNYLDSLKRILEHYEKPLQELEPRLLSERKCKAVFYRVREILQC
HAMFQIALASRVADWDQLQTIGDVFVASFSKSMVLDAYSEYVNNFNTAMAVVRKACTSKP
CFLDFLKQRQESSRDHVTLYGLMMKPIQRFPQFILLLQDMLKNTPVGHDDRLPLQMALTE
LETLSEKLNERKRDADQRCEIRHIAKAMNERYLNKLLSVGSRYLIRSDDVVETVYNERGE
IVKTKERRLFLLNDVLMCATPNLRSPQDGGGAVVPSGQRFLLKWSVPLSLVEPVEFGSSE
EMGDSVPFPALHSGEKVVVNAKPNKLYVGPGQLYQDLQNLIHDLGLVNQISTMISSLKGN
YQNVNGTVAQDWISGLQRLILKKEEEIRAADRCRIQLQLPGKQDKSGRPTSFTAVFNTLS
PSIKQAWISNLQMAKLALEEHNVQGWFIADDDGNQIKKQKHPLLLKHMPVVMSRLQEFKV
ECAVHNPEPHVNSESTADVPAVGHGCVWVASCTNQMAQIAVVAMQNSSPKVTECFNVESR
ILCMTYVPVDEPPEDREGNPEPRCCNTPNVCVGTEEGSISVYKSSQRSKKVRLQHFFTPD
KAAVTCLAYKSPFLYAGLVSGSLAVYSRTPDGSWDFSSVRLLKLGVLPVKALLAVGECVW
ASSGGHVFVIDARTHTMEHQLEAHQEEGMVVSQMVVAGVGIWIAFSSGSTLRLFHTETLE
HLQDINISTPVHNILSGHQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRG
MVSFHAHHSPVKFLIMASPVRNAVPTITDPPSQRAPPSEEDETPRCTASFLAEGDGVHPV
PIRQDSLSSSRSSLEHGPEDGAIYDLLSDPAHSQNTKRVQRANVSSVLVLSGGSGHRKIN
RKSKAARHEENMPTVMVWQIPVPDV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacgactttcctccacctcctcctgacgtgctagatgaagaagaaggtgaa
agttttgaatttgatgatgaagcccccgaggccgagcgccctccctcattccctcctgct
ctggatttcgactcttcaggctgcccggttttggagaatgccgaggccgatctcccgcca
ccaccaccgccgcagacctgttcttctgctccacacggtcagttccctccacctcctgaa
gagggacatggtgcagataaagagctcccgccgcctccagagggcgctgatacacaaggg
aatcccgggtcccgacgcaaagtcaacccgtactcggtgatcgacatttcccccgacagc
ccgcctcctttgttttccccagccaatgggaatgaagctgatgcccaggacgtacccagc
agccccattgtgccctctggatacatggtgcctgtgccttgcggctatgcctcgccctcc
aacgtcccaatcatcaccccagcctacaccacgcctgtcatcatcagacacttctcagtg
gatgaagaagtgagcattgtgggggcggggcctactctgactgacagcgtcttcaccgta
gaccatccggcgataagggaggaagacgctctggcgaagtgggcttcggaccctgctaac
acggcctggatggagaatccagatgaagttatttacgacgacgttccgagagagaattcg
ggatccactacagacgtggatgagatgatctatgatgatgtggagctgggtgaagaggga
ggtagcagctccgtggagaacggctggagctccagcgagttcgagagctacgatgaggag
agcgatggagaaggcgggcacggagagaacggcgtcctccccaacgccttcatccgccga
cacacacccagcaccaaaacacacctctctcaagatctgacacgcttgaaagagcactat
gagcgaaaggtgaaagatctcatggtgaacgcagtgggcgcggtcgagctgcagcagctc
agacacaaacatgagcagaagatgcaaaagctggtgagggcggccaagcacggcaccaaa
gacggcctggagaaaaccaaagcggcggtcaagaagggaaagtccttcattcgaaccaaa
tcttttggtcacgagaggaaggcatcatgttttgaggaagagccatccgaactcttcatc
gaggtggaatgtttaaacgtggagcctgtgttaggccccgcccctgagggcctctctcaa
cagcaggtggtgaggagatgtattctggagtcaatattagagagtgagaagaattattta
gactcgctgaagagaatattagagcactacgagaagccgctgcaggagctcgagcctcgg
ctgctgagcgagaggaagtgtaaggcggtgttttaccgtgtgagggagatcctgcagtgc
cacgccatgttccagatcgccctggccagccgtgtggcagactgggaccagctccagacc
atcggggacgtcttcgtcgcctccttctctaaatccatggttctggacgcgtacagcgag
tacgtgaataacttcaatacggccatggcggtggtgaggaaggcatgcacctccaaaccc
tgcttcctcgacttcctcaagcaacgtcaggagagcagtcgcgatcacgtcacgctctac
ggcctcatgatgaaacccatccagagattcccacagttcattctgctcctgcaggacatg
ctgaagaacacaccggtgggccacgatgaccgcttgcccctacagatggccctgactgag
ttggagactctgtctgagaagctgaacgagaggaagagagacgcagatcagcgctgtgag
atccgacacatcgccaaggccatgaacgagcgctacctcaacaagctcctgagtgtgggt
agcaggtatctgatccgctcggacgacgtggtggagaccgtgtacaacgagcgaggagag
atcgtcaagaccaaagagagacgacttttcctgcttaatgacgtgctcatgtgcgccacg
cccaacctgcgctctcctcaggatggtggaggtgccgtcgttccttcaggccagcgtttc
ctgctcaagtggagcgtccctctcagcctggtggagccggtggagttcggctcctcggag
gagatgggagactccgtccctttccccgcccttcactccggagagaaggtggtcgtcaac
gccaagccaaataagttgtacgtgggtccgggtcagctttatcaggacctgcagaacctg
atccacgacctcggcctcgtcaatcaaatctccaccatgatcagcagcctcaagggcaac
taccagaacgtaaatgggacagtagctcaggactggatctctggtcttcagcgtcttatc
cttaagaaagaggaggagattagagctgctgatcgctgccgcatacaactgcagttacct
ggaaaacaagacaagtcgggccgacccacgtccttcacggccgtctttaacaccctgagc
ccgtctatcaagcaggcctggatcagcaacctgcagatggccaagctggctctagaggag
cataacgtacagggctggttcatcgctgatgatgatgggaatcagattaagaagcagaaa
catccactcttgctgaagcacatgcctgtggtcatgtccagactgcaggagtttaaggtg
gagtgtgcggtccataacccagagccccacgttaacagcgagagcacggcggacgtaccg
gcagtgggacacggctgtgtttgggtggccagctgcaccaatcagatggctcagatcgcc
gtagtggccatgcagaactccagcccgaaggtgaccgaatgtttcaacgtggagtcgcgg
atcctctgcatgacctatgtacctgtggatgagcccccggaggacagagaaggaaacccc
gagcctcggtgctgcaacacacccaacgtgtgtgtggggacagaggagggaagcatctcc
gtctataagagcagtcagcgatccaagaaggtccgactgcagcacttcttcactccggat
aaagccgccgtgacgtgtttagcgtacaagagtccgtttctctatgccggcctggtcagc
ggctccctcgccgtctactcacgaacaccagacggttcatgggatttctccagcgtgcgg
ttactgaagctcggcgtgctgccggtgaaggccctgctggccgtcggagagtgtgtgtgg
gcctcatctggcggacacgtcttcgtcatcgatgctcgcacgcacactatggagcaccag
ttggaggcgcatcaggaggaggggatggtcgtgtcccaaatggtggtagcaggagtgggc
atctggattgccttcagctcaggttccacactccgcctgttccacactgagacactggag
cacctgcaggacatcaacatctctacacctgtccacaacatcctctcgggtcatcagagg
gtctctgtgagcagtctgctagtgtgtcacggtttgctactcgtggggacgaatcttggg
gtgacggtagctctgagtgtcccccgactacagggcatccccaaggtcacaggacgaggc
atggtgtccttccacgctcatcacagccctgtgaagttcctcatcatggcgtcgcccgta
cggaacgctgttcccaccatcactgacccgcctagtcagcgtgctcctccttcagaagag
gacgaaactcccagatgtactgcttcctttctcgccgagggagacggcgtccaccccgtc
ccgatacgccaggactcgctctcgtcctcccgcagctccctggagcacggtccagaggac
ggcgccatctacgacctcctcagtgatccggcgcactcgcagaacactaagcgggtgcag
cgggcaaacgtgagctcagtgctggtgctgtccggcggctcgggtcaccgaaaaatcaac
aggaagagtaaagcggcacgacacgaagaaaacatgcccacggtcatggtgtggcagatc
cccgtgcctgacgtgtga
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