Ictalurus punctatus (channel catfish): 108270321
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Entry
108270321 CDS
T04658
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108270321 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108270321 (phc1)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108270321 (phc1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-FCS
Motif
Other DBs
NCBI-GeneID:
108270321
NCBI-ProteinID:
XP_017332383
Ensembl:
ENSIPUG00000000060
UniProt:
A0A2D0RPF0
LinkDB
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Position
1:complement(244623..253445)
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AA seq
827 aa
AA seq
DB search
MEQAEDQGSSGSSSSSGTSSGGNARPAQISQMSLYERQAVQALQALQRQPNAAQYFQQLM
LQQQINSAQLHNLAAVQQATLAASRQSSSPNTSVSAVSTAQCTVNLSSTSGGGTMTNPRP
VGPATSVTSSALSQSVLLGGNSTGQGQMYLRVNRSLRAPQLIFMPGGTTTAAMATVAQQQ
PQQQQQQSQQQQQQEVPPTSSSNQSDTDQVQNLALRCVSTPRVTAVKTEYPDRKDPSSFS
LGPQSQQQQQQFSPSAQQMNSSKLPAPPSSTSSSLSSSSSSSSPSLPLSQLLLSPSRLTP
AATVTHILVPSSNVPTSSPGFPKPNMAAQTLVVQPLQQQQQNGGDKMAGPVPIQPKTAQS
GRLPSQMPPRHPPPILPAPPISHPPHVPVQLLGSRQGALGNSQAVAVPQARTCFSQQDSS
AHNSNHSSPSNAVPMVTAMETGTAGAGLKLTNQNAEPSQIGSSAAIQTADGEHSSTVAPP
AGETMFEQTGTPQMKPAIGSLKRKSESDMAGEMTSETAAQNCQSVPDSAPPLSPAPSLDT
APERAFSTPPTLSLSLPHPRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPIKERAE
GVPVPLSMQPENSAPSVLKCEFCETFAPASQFRGTKRFCSKTCAKRYNVSCSHHFRSSRG
RSSAPVYDEVARRRGPHRSSSEIACAKISGRHLSVKCRSESSRSEDVSSCEGEEEEEEEE
DYLSPGSAYSCSRPAHCGAQLDESAQGGLPLDGDHFLSASPAHWSVEEVCRFISSLQGCE
DLAGHFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICASINSLRD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcagaggatcagggcagctcggggtcctccagcagcagcggtaccagttcc
gggggaaacgctcggcctgcacagatctctcagatgtctctgtatgaacgacaagctgta
caggctctgcaggctctacagcgacagcctaacgcagctcagtatttccagcagctgatg
cttcaacagcagattaacagtgctcagcttcacaacctcgctgctgtgcaacaggccacg
ttagctgccagtcgacagtccagttctccgaacaccagcgtctctgcagtgagcacggcg
cagtgcaccgttaatttaagcagcacttctgggggcgggaccatgaccaacccccgccca
gtcggccctgcgacatctgttacgtcatctgctcttagccaatcagtgctgctgggtggg
aactcgaccggtcagggacagatgtacctgagagtgaatcgctcactcagggctcctcag
ctcatcttcatgcctggaggcacgacaacagctgccatggcaacagttgcccagcagcag
cctcagcaacaacagcaacagtcccagcagcagcagcaacaggaagtcccacccacatct
tccagtaaccagtcagatactgaccaggtgcagaatcttgccctgcgctgtgtttctacc
cccagagtgaccgccgttaagactgaatatcctgacaggaaggatcccagttccttctct
ctcggcccacagtctcagcagcagcagcagcagttttctccgtcagcacagcagatgaac
agcagtaaacttcccgctcctccttcttccacctcttcctctctctcctcctcttcttct
tcctcctctccatctctccctctctcccagctcctgctctctccatcccggctcacaccc
gctgccacggtgacccacatcctggtcccgagctccaacgtccccacttcctctccgggt
ttccccaaacccaacatggcggctcagacgctggtggtgcagccgcttcagcagcagcag
caaaacggaggggacaaaatggcaggccccgtccccatccaacccaaaacggcccaaagt
ggacgcctgccctctcagatgccccctcgccaccctccgcccatcctcccggctccgccc
atttcccatcccccacacgtccctgtccagttgctcgggtccaggcagggtgcgctggga
aactcccaggctgtagcagtgccacaggcccgaacctgcttctcccaacaggacagctcc
gcccacaactccaatcacagctccccctctaatgcagtccccatggtaacggccatggag
acaggcactgctggtgcgggtctaaaactaaccaatcagaatgcagaacccagtcagatt
ggctcttctgctgcgattcagactgcagatggagaacacagcagcactgtggcgccacct
gctggagaaacgatgttcgaacaaactggaaccccacagatgaagcctgccatcggctcc
ttgaagagaaaatcagaatcagacatggcgggtgagatgacctcagaaaccgctgcccag
aactgtcagtcagtgcctgactctgcccctccactctctcctgctccctcattggacaca
gctccagagagagcgttctccaccccaccgacactgtctctgtcccttccccaccctcga
gctcctctcccccaggccgtggtcaaaccgcaggtcctcactcaccttatcgaaggcttc
gtcattcaggaaggagccgagccatttcctgtgactggaccaataaaagagcgggctgag
ggtgttcctgtgcctctctccatgcaacctgaaaacagcgccccgtctgtgctgaagtgt
gagttctgtgagacttttgctcctgccagtcagtttcgcggaaccaaacgcttctgctcc
aaaacctgcgccaagaggtataatgtgagctgtagtcatcatttccgctccagtcgaggc
cgcagctccgcccctgtgtatgatgaggtagcgagacgcaggggtcctcacaggagcagc
tctgagatcgcctgtgctaaaatctctggcagacacctgtctgtaaagtgtcgctctgag
tccagtcgttcggaggacgtctccagctgtgaaggtgaagaagaagaagaagaggaagaa
gactacctctctccaggctccgcctactcctgctctcgccccgcccactgcggcgctcaa
ctggacgagtcggcacaaggcggccttccgctggacggagaccatttcctgtctgctagc
cctgcccactggagtgtggaggaagtgtgtcgcttcatttcctctctgcaaggctgtgag
gatctggcgggtcacttcctgtctcaggagattgatggtcaggcgctgctgttgctgaag
gaggagcatctgatgagcaccatgaacattaaactgggccccgccctcaagatctgcgcc
tccatcaacagcctgagggactga
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