Ictalurus punctatus (channel catfish): 108270375
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Entry
108270375 CDS
T04658
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
108270375
NCBI-ProteinID:
XP_017332479
Ensembl:
ENSIPUG00000005423
UniProt:
A0A2D0RPQ5
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All DBs
Position
9:1398014..1403312
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AA seq
651 aa
AA seq
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MDLRVASILLLLVALVAGHGERYMLKKVVKPSYAVKSHVVSVAGEPGAPGEPGEPGPPGP
PGPPGENGEGLPGPRGPPGPPGPSGYSAPGKPGTPGGPGKPGANGAPGLKGDTGAHGPQG
PRGAPGPPGSPGPAGISAPGNPGPSGLPGSMGPRGEPGAKGHPGIPGAPGQKGDRGIGIH
GPPGQTGATGPMGPVGAPGQPGVGKPGKPGYPGEPGKVGSPGRDGEPGAMGPTGPKGHTG
APGLGMPGKPGESGAPGLPGPTGPKGPQGASGAPGAPGSPGYGKPGAPGSKGDTGPVGSP
GATGQKGEQGARGPTGYTGATGPVGPGGPQGPRGFPGEKGSTGEKGETGPMGPQGFKGHK
GDQGSQGPEGKSGYPGATGPQGQRGATGAPGSKGDTGETGATGAPGATGPVGPKGNTGNS
GPPGETGPAGAPGPRGATGPSGPSGAPGVKGQTGAPGAPGPAGLAAKGIPGPQGPPGLPG
SDGAPGESGPAGPPGPPGPPGEVIIAETKGTFVQEPFVKAPVSAFTALTTTPYPPAGSPI
KFEQIVYNAENHYDPETGIFTCQVPGVYFFSYSMHVNGANALVALYKNEDPIMFTYDEYN
KGFLDQMSGSAVLQLNEQDTVYVQIPDDEANGVFAADNVHCSFSGFLIAST
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgagtagcaagcattctccttctcctggtggccctggttgccggccatggc
gagagatatatgttgaagaaagtggtgaagccttcttatgccgtgaaaagtcatgtggtt
tctgtagctggagagcctggtgccccaggtgagccaggtgaacctggacctcctggacct
cctggaccccctggcgagaatggtgaaggactgccaggacctcggggaccacctggccca
cctggaccttctggctactcagcacctggaaagccaggcactccaggtggaccagggaaa
ccaggtgcaaatggtgcacctggacttaaaggagatactggtgcacatggtcctcaagga
ccaaggggtgctcctggacctcctggtagccctgggcctgccggtatatctgcccctggc
aatcctggaccaagtggtttgcctggatcaatgggaccaaggggagagccaggtgctaag
ggacatccaggtattcctggtgcaccaggacaaaaaggagacagaggtattggcattcat
gggccaccaggtcaaactggtgcaactggacctatgggacctgtaggcgcacctggtcag
cctggtgttggtaaacctggtaaacctggctacccaggtgagccaggtaaagtaggttca
cctggtcgtgatggggaacctggtgctatgggaccaactggaccaaaaggccacactggg
gctcctggacttggaatgccaggtaaaccaggtgaaagtggtgctccaggattgccaggt
cctacaggccctaaaggtcctcagggagcatcaggggcacctggtgctcctggtagtcca
ggttatggtaagccaggtgctcccggttcaaaaggtgatacaggtccagtaggtagccct
ggcgcaacaggtcagaaaggtgagcaaggtgcaagggggccaacaggatatacaggagca
actggcccagtgggtccaggtggtcctcagggtccaagaggtttccctggtgagaagggg
tctacaggtgaaaagggtgaaacaggtccaatggggcctcaaggctttaagggacataag
ggagatcaggggtcacagggacctgagggcaaatcaggctatccaggtgcaacaggccca
caaggccaaaggggagctacaggtgctccaggtagcaaaggagatactggtgagacaggt
gcaactggtgctcctggagcaactggacctgttggacctaagggtaatacaggaaattct
ggaccacctggtgaaacagggcctgcaggtgccccagggcctagaggagctactggtcct
tctggtccatcaggtgcaccaggagttaaaggtcaaactggtgcacctggtgcacctggt
cctgcaggtcttgctgctaaaggaattcctggacctcaaggtccaccaggacttcctgga
tcagatggtgcccctggtgaaagtggaccagctggccctcctggcccacctggtcctcct
ggtgaggttattattgcagaaactaaaggaacttttgtccaggaaccttttgtcaaggcc
ccagtgtctgcctttacagccttaactacaacaccttatcctcccgctggtagccccatt
aagtttgaacaaattgtctacaatgctgagaatcactatgaccctgagacaggtatcttt
acctgccaggttcctggagtgtatttcttctcatacagcatgcatgtgaatggagctaat
gctttggtggcactgtacaaaaacgaagacccaattatgttcacttatgatgagtacaac
aagggcttcctggaccagatgtctggcagtgctgtccttcagcttaatgagcaggacacc
gtttatgtccagatccctgatgatgaggcaaacggtgtctttgctgctgataatgtccac
tgctccttcagtggtttcctgattgcttctacgtga
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