KEGG   Ictalurus punctatus (channel catfish): 108270375
Entry
108270375         CDS       T04658                                 
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
  KO
K19479  collagen type X alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 108270375
NCBI-ProteinID: XP_017332479
Ensembl: ENSIPUG00000005423
UniProt: A0A2D0RPQ5
LinkDB
Position
9:1398014..1403312
AA seq 651 aa
MDLRVASILLLLVALVAGHGERYMLKKVVKPSYAVKSHVVSVAGEPGAPGEPGEPGPPGP
PGPPGENGEGLPGPRGPPGPPGPSGYSAPGKPGTPGGPGKPGANGAPGLKGDTGAHGPQG
PRGAPGPPGSPGPAGISAPGNPGPSGLPGSMGPRGEPGAKGHPGIPGAPGQKGDRGIGIH
GPPGQTGATGPMGPVGAPGQPGVGKPGKPGYPGEPGKVGSPGRDGEPGAMGPTGPKGHTG
APGLGMPGKPGESGAPGLPGPTGPKGPQGASGAPGAPGSPGYGKPGAPGSKGDTGPVGSP
GATGQKGEQGARGPTGYTGATGPVGPGGPQGPRGFPGEKGSTGEKGETGPMGPQGFKGHK
GDQGSQGPEGKSGYPGATGPQGQRGATGAPGSKGDTGETGATGAPGATGPVGPKGNTGNS
GPPGETGPAGAPGPRGATGPSGPSGAPGVKGQTGAPGAPGPAGLAAKGIPGPQGPPGLPG
SDGAPGESGPAGPPGPPGPPGEVIIAETKGTFVQEPFVKAPVSAFTALTTTPYPPAGSPI
KFEQIVYNAENHYDPETGIFTCQVPGVYFFSYSMHVNGANALVALYKNEDPIMFTYDEYN
KGFLDQMSGSAVLQLNEQDTVYVQIPDDEANGVFAADNVHCSFSGFLIAST
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggacctacgagtagcaagcattctccttctcctggtggccctggttgccggccatggc
gagagatatatgttgaagaaagtggtgaagccttcttatgccgtgaaaagtcatgtggtt
tctgtagctggagagcctggtgccccaggtgagccaggtgaacctggacctcctggacct
cctggaccccctggcgagaatggtgaaggactgccaggacctcggggaccacctggccca
cctggaccttctggctactcagcacctggaaagccaggcactccaggtggaccagggaaa
ccaggtgcaaatggtgcacctggacttaaaggagatactggtgcacatggtcctcaagga
ccaaggggtgctcctggacctcctggtagccctgggcctgccggtatatctgcccctggc
aatcctggaccaagtggtttgcctggatcaatgggaccaaggggagagccaggtgctaag
ggacatccaggtattcctggtgcaccaggacaaaaaggagacagaggtattggcattcat
gggccaccaggtcaaactggtgcaactggacctatgggacctgtaggcgcacctggtcag
cctggtgttggtaaacctggtaaacctggctacccaggtgagccaggtaaagtaggttca
cctggtcgtgatggggaacctggtgctatgggaccaactggaccaaaaggccacactggg
gctcctggacttggaatgccaggtaaaccaggtgaaagtggtgctccaggattgccaggt
cctacaggccctaaaggtcctcagggagcatcaggggcacctggtgctcctggtagtcca
ggttatggtaagccaggtgctcccggttcaaaaggtgatacaggtccagtaggtagccct
ggcgcaacaggtcagaaaggtgagcaaggtgcaagggggccaacaggatatacaggagca
actggcccagtgggtccaggtggtcctcagggtccaagaggtttccctggtgagaagggg
tctacaggtgaaaagggtgaaacaggtccaatggggcctcaaggctttaagggacataag
ggagatcaggggtcacagggacctgagggcaaatcaggctatccaggtgcaacaggccca
caaggccaaaggggagctacaggtgctccaggtagcaaaggagatactggtgagacaggt
gcaactggtgctcctggagcaactggacctgttggacctaagggtaatacaggaaattct
ggaccacctggtgaaacagggcctgcaggtgccccagggcctagaggagctactggtcct
tctggtccatcaggtgcaccaggagttaaaggtcaaactggtgcacctggtgcacctggt
cctgcaggtcttgctgctaaaggaattcctggacctcaaggtccaccaggacttcctgga
tcagatggtgcccctggtgaaagtggaccagctggccctcctggcccacctggtcctcct
ggtgaggttattattgcagaaactaaaggaacttttgtccaggaaccttttgtcaaggcc
ccagtgtctgcctttacagccttaactacaacaccttatcctcccgctggtagccccatt
aagtttgaacaaattgtctacaatgctgagaatcactatgaccctgagacaggtatcttt
acctgccaggttcctggagtgtatttcttctcatacagcatgcatgtgaatggagctaat
gctttggtggcactgtacaaaaacgaagacccaattatgttcacttatgatgagtacaac
aagggcttcctggaccagatgtctggcagtgctgtccttcagcttaatgagcaggacacc
gtttatgtccagatccctgatgatgaggcaaacggtgtctttgctgctgataatgtccac
tgctccttcagtggtttcctgattgcttctacgtga

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