Ictalurus punctatus (channel catfish): 108271110 Help Entry 108271110         CDS       T04658                                  Symbol traf5 Name (RefSeq) TNF receptor-associated factor 5   KO K09849   TNF receptor-associated factor 5 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04217   Necroptosis ipu04621   NOD-like receptor signaling pathway ipu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ipu00001]  09140 Cellular Processes   09143 Cell growth and death    04217 Necroptosis     108271110 (traf5)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     108271110 (traf5)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     108271110 (traf5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ipu04121]     108271110 (traf5) Ubiquitin system [BR:ipu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108271110 (traf5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 zf-TRAF_2 TRAF3_RING HrpB7 zf-RING_5 zf-Nse EzrA CCDC93_CC zf-rbx1 DUF1664 DUF5955 Spt20_SEP MT Spc42p Fez1 Motif Other DBs NCBI-GeneID:  108271110 NCBI-ProteinID:  XP_017333882 Ensembl:  ENSIPUG00000002193 UniProt:  A0A2D0RTQ7 LinkDB All DBs Position 10:11621904..11633213 Genome browser AA seq 550 aa AA seqDB search MAAEENECSSLQLSKQSSGPVRSWELESFLANRTLSFVSQLDERYMCPACGGAILNPHQT GCGHIFCAKCIRMFIESSDTSKCPLDGILIKAEEVFQDNCCKRELLNLDVYCSNAPDCAQ TVPLCNLQKHLTLCQYETLQCSNPGCTDILLRKNLPDHQRRLCPFRTEFCRYCTKPYPIT QLPDHENMLCPEAEVQCPNNCSEVVKRHKLKGHVDECPEVETDCIYKQYGCIVRDKRSKV KVHEYTEFSHHVLLVLESNSKLAKQVDQLQQDLAFQERELKERNVLVASLNREVTKCDNT FSAIQRSMVEQRECVSNVKQELQELRSVLDAELAKEELSALRVSLDSLRQQVAMMQSLRD HVGALGQTCQRHTRLLDIHVEQLQCNEQRFRQLESTSYDGKLIWKVHDYQRRKDAGAPLT SPPFYTGRSGYKLSARVYPDGEGSARGTHLSLYVMVMRGDFDSLLPWPFRQGVTLTVLDQ SGSRNHISCSFTPDTNKESFRRPTADSNAALGFSRFISHTDLEGPRNAVYIRDDTLFIKV KVDTTGLEDL NT seq 1653 nt NT seq  +upstreamnt  +downstreamnt atggcagctgaggagaacgaatgctcaagcctccagctctccaaacagagctctggtccc gtgaggtcgtgggagttggagtccttcctggccaatcgcacactcagtttcgtgtcccag cttgatgagcgctacatgtgcccggcctgcggtggcgccattcttaacccccaccagacg ggctgtggccacatcttctgtgccaagtgcattagaatgttcattgagagcagcgacaca tccaaatgtcccttagatggcattttgatcaaggcagaggaggtttttcaagacaactgc tgtaaaagagaactactaaatcttgacgtttactgtagcaacgctccagattgtgcacag acggtgcctctgtgtaatctgcagaagcacctaacgctctgtcagtacgagactctgcaa tgctccaacccaggttgcaccgacatcctgttacgcaagaatttaccagaccaccagcga cgcctctgtccctttcgcacagaattctgtcgctactgcaccaagccgtaccctattaca cagcttccagaccatgaaaatatgttgtgccccgaagctgaagttcagtgtcccaacaac tgctcggaggttgttaagaggcataagctcaaaggacatgtagatgagtgtccggaagtg gagacagactgcatttataagcaatacggctgcatagtccgagataaaagaagcaaagtg aaagtccatgaatacactgaatttagccaccatgtgcttcttgtactggagagcaacagc aagctcgctaaacaggtagatcagctgcagcaggacttggccttccaggagagggagctg aaggagaggaacgtgcttgttgccagtcttaacagagaggtgaccaagtgtgacaataca ttttctgccatccagaggtcaatggtggagcagagggagtgtgtctccaacgttaaacag gagctgcaggaacttcgcagtgttctagatgctgagctggctaaagaggagctgagtgcc ctccgagtttcactcgattctctcagacagcaggtggcaatgatgcagagcctcagagat cacgtgggagctttagggcagacttgtcagcgccacactcgactcctggacatccacgtg gagcagctgcagtgcaacgagcaacgttttcgccagcttgagtcgacgtcgtatgatgga aagctcatctggaaggttcacgactaccagcgcagaaaagatgccggtgctcctctcacc tcgccgcctttctacaccggccgcagcggctacaagctgagcgcccgcgtgtatccggat ggggaaggaagcgcccggggcacgcacctctctctctacgtcatggtgatgagaggcgac ttcgactcgctgctgccgtggccgttccgccagggcgtcacgctaaccgtgctggaccag agcggctcacgcaaccacatcagctgcagcttcacccccgacaccaacaaagagagcttc cgcagacccacggccgacagcaacgccgcgttagggttctcccgcttcatctctcacact gatctggaaggtccccgaaatgctgtctacatacgagacgacacactgtttatcaaagtc aaggtggacacaacagggttggaggatttgtag

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