Ictalurus punctatus (channel catfish): 108271153
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Entry
108271153 CDS
T04658
Name
(RefSeq) DAZ-associated protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108271153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108271153
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108271153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
108271153
NCBI-ProteinID:
XP_017333980
Ensembl:
ENSIPUG00000006899
UniProt:
A0A2D0RVJ2
LinkDB
All DBs
Position
10:complement(8999467..9013829)
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AA seq
447 aa
AA seq
DB search
MSALQSSTLATDMNNLPGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTN
QSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRAKDGWKGGKSDS
NKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ
AVNMHFHDIMGKKVEVKKAEPRDNKAPGPGQLGANQWGPRAILSAANGWAAQPAQSWQQS
YGPQGVWVSTGQPIGGYGPPLPAGRGAAQPPSPFNAFLVTATPPGGFGAPQGYPQQGYST
PPQFGYSFGTPQGDQFVPQGMPPPPTTPGAGPLGFAPATTPTQDMSKAPPAQPDFSYSQY
GLGNYPQDPSAYGPTRPSHSYGQDEQGYSAGYGQDLSGFGHSFADPSQQTASYGAPSAQP
TSAPQPTATTFGRGQNHNVQGFHPYRR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcactccagtcctcaactctcgctacagatatgaacaacctacctggagatgaa
attgggaagctgtttgtgggtggattagactggagtacaactcaagagactttacgaaat
tacttctcccaatatggagaggttgtggactgcgtcatcatgaaggacaaaagcacaaat
cagtccaggggttttggctttgtgaagtttaaagatccaaactgtgttcggactgtcctg
gataccaagcctcataaccttgacggtagaaatattgaccctaagccatgtactccaaga
ggaatgcagccggagaagacgagagcaaaagatggctggaaaggaggtaaaagtgacagc
aataaatccaagaagatatttgttggtggaattccacacaactgcggtgaacctgaactc
agggactattttaacagatttggagtggtcacagaggtggtaatgatctatgatgcagag
aaacagagaccccgaggttttggatttattactttcgaggccgaacaatcagtggaccag
gctgtcaacatgcattttcacgacatcatgggcaaaaaagttgaagtgaaaaaggctgag
cctcgggacaacaaagctcctggccctgggcagctgggagccaatcagtggggacccaga
gccatcttaagtgcggccaatggctgggccgcacagcctgctcagagctggcagcagagc
tatggccctcagggggtttgggtgtccacagggcagccgatagggggatatgggcctcct
ttgccagcaggccgaggtgctgcccaacctccctcgccctttaatgcgttcctagttaca
gcaaccccaccaggaggatttggggcacctcagggatatccacaacagggctacagcaca
cctcctcaatttgggtacagttttggcacgccacaaggtgaccagtttgtaccccaagga
atgcctccgcctcctactactcccggagctgggcctctgggctttgcccctgctaccacc
cctactcaggacatgagcaaagccccaccagcacagcctgacttctcttatagccagtac
ggcttgggtaactatcctcaggacccctctgcctacggaccaacgcgtccttctcacagt
tatggtcaggatgagcagggatatagtgcaggttatgggcaggatctgagcggctttgga
catagctttgccgaccctagccagcagactgcctcatatggtgccccttccgcacagcct
acatcagcgccgcagcccacagcgactacttttggtcgtgggcaaaaccacaacgtccag
ggcttccatccttatcggcgctga
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