Ictalurus punctatus (channel catfish): 108271751
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Entry
108271751 CDS
T04658
Symbol
atf1
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-1 isoform X1
KO
K09053
activating transcription factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271751 (atf1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
108271751 (atf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
pKID
bZIP_2
bZIP_Maf
ASD2
Motif
Other DBs
NCBI-GeneID:
108271751
NCBI-ProteinID:
XP_017334968
Ensembl:
ENSIPUG00000021884
UniProt:
W5UJA8
LinkDB
All DBs
Position
11:complement(27167828..27174366)
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AA seq
306 aa
AA seq
DB search
MEEVHQSGSNGTESQSVTIPTTITASQLSQITQMTLGGSPVAVVQLPGGQFQVQGVIQSA
QSSVIQSPPAQVQGQGSDSEDSQDSTDSGASNQKTRELLARRPSYRKILNDLSAEEVATR
NEGEEETSVSSTMTTVSLSTPIYQTSSGQYIAIASNGSLQLAGAGSEGVQGLQTLTMTNS
NPNQPTILQYAQTADGQQILLPSNQVVLQGAGGEMQAYQIRSSSSAMPQTVVMTSPVIGS
QGKSDDPQMKREIRLAKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDL
YCVKTG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggttcaccagagtggcagtaacggcaccgagtcacaatctgtcacaatcccg
accaccatcacagcgtctcagttatcacagatcactcagatgactctgggaggatctccc
gtggccgtggtgcagctccctggaggtcagtttcaggtgcagggggtcatccagtcggct
cagtcttcagtgatacagtctccaccagcacaagtacagggtcaggggtcagacagtgaa
gattctcaggattcgacagacagtggagcttcgaaccagaagacacgagagctgctggcc
agacgcccgtcttacaggaagatattaaatgacctgtcagcagaggaagtagcgacgcgt
aacgaaggagaggaggagacctcggtgtcatccaccatgaccactgtgtctctgtccaca
cccatctaccagaccagcagtggacagtacattgcgatagcgtcgaatggatctctgcag
ttagcgggtgcaggctccgagggcgttcagggcctgcagacgctcaccatgaccaactca
aaccccaaccagcccactatactacagtacgctcagaccgcagatggacagcagatcctc
ctacccagcaatcaggtggtgctgcaaggagcaggaggtgagatgcaggcatatcagatt
cgctcgtcgtcgtcagcgatgcctcaaaccgtcgtcatgacatcaccagtcatcggctct
cagggaaagagtgacgatcctcagatgaagagagagattcgcctcgccaaaaacagggag
gcggctcgtgagtgtcgcaggaagaagaaggagtatgtgaagtgcctggagaaccgtgtg
gccgtgctggagaaccaaaacaaaacgctgatcgaagagctcaagacgttaaaggacctg
tactgcgtcaaaacgggctag
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