Ictalurus punctatus (channel catfish): 108271824
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Entry
108271824 CDS
T04658
Symbol
si:dkey-192l18.9
Name
(RefSeq) F-box/LRR-repeat protein 7 isoform X1
KO
K10273
F-box and leucine-rich repeat protein 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108271824 (si:dkey-192l18.9)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108271824 (si:dkey-192l18.9)
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
108271824
NCBI-ProteinID:
XP_017335129
Ensembl:
ENSIPUG00000024987
UniProt:
A0A2D0RXA1
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All DBs
Position
1:complement(29769821..29807542)
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AA seq
495 aa
AA seq
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MGANNGKQCGSEGKGSSSISSDVSSGTDHTPTKAPRNVTASEDSDLSMRTHSTPSPALIL
NLSPSHLSPQTLPNGHESPSSSPSSSSSPTIPRETVAIVHAPPGSCKKASKSHSSSLVEF
IPDPVVLQIFAHLSTPQLCRCARVCRRWYSLAWDPRLWRTIRLSGELLHADRALKVLTQR
LCQDTPNVCLTLEMVVASGCPRLSDRGLRVLGQCCPELRHLEVAGCYNVSNEAVFDVVSR
CPNLEHLDVSGCPKVTCISLTQESSLPLSPLHGQEIGLRYLDMTDCTSLEDEGLRAIALH
CPLLTHLYLRRCTRLTDEALRQLTLHCPALRQLSLSDCHLLGDFGLREVARMEGQLRHLS
VAHCSRITDVGMRYVARYCPRLRYLNARGCEGITDQGLSHLARGCPKLRALDVGRCPLVS
DMGLEVLARCCAGLRRLSLKGCESLTGRGLKALATGCPELQMLNVQECEVPAEVLRLIRR
HRRRCVIEHTNPAFY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgaataacggcaaacagtgcggaagcgaaggtaaaggaagctccagcatttcc
tccgacgtgagctccggcactgatcatacacccactaaagctcccaggaatgtaactgcc
agtgaagactcagacctgagcatgaggacacatagcaccccaagtcctgctctcatcctg
aacttgagtccttctcatctttctcctcaaactctccccaatggtcatgagtctccatcc
tcatccccatcttcatcttcatcccccaccattcctagagaaactgtcgctatagtccat
gctcctccaggaagctgcaaaaaggcctccaaatctcactcctcttcactcgttgaattt
attccagaccctgtcgtgttacagatcttcgctcacctgtccacgccgcagctgtgtcgc
tgtgcccgagtgtgtcgccgctggtacagcctggcctgggacccccgtctctggagaacc
atccgacttagcggagagttgctccatgctgacagagccctgaaggtcctcactcagcgc
ctgtgccaggacacccccaatgtctgtctcactctggagatggtggtggcgagcggatgc
ccaaggctgtctgatcgtggcctgcgtgtgctaggtcagtgctgtcctgagctacgacac
cttgaggtggcaggctgttacaacgtttcaaacgaggcggtatttgacgtcgtgtcccgc
tgtcctaaccttgagcacctggatgtctcaggttgccctaaagtgacatgtataagtctg
actcaggagagttcactgcctctctctccactccatggacaggagatcggcttgcgctat
ctggacatgacagactgcacatctctggaggatgaaggccttcgtgccatcgctcttcac
tgcccgctcctcacccatctctatctgcgccgctgcacccggctgacagatgaagcttta
cgccagctgactcttcactgccctgctctgcgccagctcagtctaagtgattgccattta
cttggcgacttcggcttgcgtgaggtggcccgcatggagggtcagctccgccatctgagc
gtggcacactgcagccgcatcactgacgtaggtatgcgttatgtggcacgctactgtcca
cgtctgcgctacctgaatgctcgaggctgtgaaggcatcacagatcagggcctgagccat
cttgctcgcggctgccccaagctgcgggcgctggacgtgggccgatgcccgctggtgtca
gacatgggacttgaggtgttggcacgttgttgcgctggtctcagaaggctcagtctaaaa
ggatgtgagagtttaaccggcagagggttgaaggcattagctacaggatgtcctgaactg
cagatgcttaatgtacaggagtgtgaggtgcccgcggaggtgttgcggctgatacgacgc
caccgcagacgctgtgtgattgaacacaccaacccagctttttactga
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