Ictalurus punctatus (channel catfish): 108272198
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Entry
108272198 CDS
T04658
Symbol
igfn1.1
Name
(RefSeq) immunoglobulin-like and fibronectin type III domain-containing protein 1.1 isoform X1
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
V-set
Pur_ac_phosph_N
C2-set_2
PT
Motif
Other DBs
NCBI-GeneID:
108272198
NCBI-ProteinID:
XP_017335958
Ensembl:
ENSIPUG00000023658
LinkDB
All DBs
Position
11:complement(9064747..9093069)
Genome browser
AA seq
1689 aa
AA seq
DB search
MWKRSKVTDQTATGQGGTENQPPKKKGTKRRSKVPGVMITQYVEELPEGKSTPDFTRKPI
ALTIQEGKLAIFKAKVIGEPKPTVSWKRAKGEMNDPEKFQNKYDPVTNEYTLEIPKVSGE
EADTYKCYAVNEYGKAVCPVVLNIIEVGFKKSKEFKKTANLEDPSEFRNKLRRSVGKNVV
EKKDGEIDEAVWDLLLSADKKDYERICAEYGITDFRGMLKKLNELKREREQEQALFIQYI
SNLRHLEVKSENSATFELDMELKDPNSRIFLYKDGVMVPYSKDSESELKHYLKQVGKKYV
FTVKNLSPEDAGIYQVDVEGVNVFSTDFKIPPVDFLVKIQEVKAEEREDAIFECVTSLPM
NQILWTLKNNPLSNSDKYEITVSEDKMIHRLKVIDCMPVDAGIYCAVAGIKSCSAWLVVE
ANKNPAMKGKKTVRKTTQAGGSGVDLAKLAAEQQDKNKKEMKDAMEAAKRAKADQDAAAA
KAKAEAEDALAASRAAAAAKAAAAAQAAEAALASAKAKGISEKDAKAQAEAAAAAAAAKA
QAEAEANARKLAEAKAMAAGMSANDIAKAGAAAAAMLNENIAAAEGLGLGGAGMGRTKGD
AGGSGLAGGANATGSSGFSGGADLSGVSGLAGGASPTGGSGFAGGADPLGGSGLSGGAGG
VGQALKEGADAGAVSGAKFKKHERTEMDDTVTVMVGEPSSPEVAPVKQTGEPEQSEEQPE
QDEMEPEQTEEQPKQAKKQTCVRQGPLLPDTVTVGGNPHGNPSSNPGHNPSGNPGHNPSG
NPGHNPSGNPGHNPSGNPGHKHGSNPGHNPSSNPGHNPSSNPGHNPSGNPDGKLNGNPDG
NPSGNPGGNGDKPEGNEGAPPDGVATEGTKEESAEAGKHSGCTRQGPLLPEAITDPGVHF
TAGLEDCRTIVGEAAELVCKLSSADCKALWYKDGKEISDSTEGMTISKDGATHKLKIHKV
SEEFAGKYKLEADGRKTEAMILVEDPPRFATKDLEEFAKPRVVKNNHKAEFKIPYIGREA
TKIQWYKDGEELTTDANCKIETTENSCRLSLNKLQRKDTGEIKIKIKNEFGTIEATTNLV
VLDKPTPPLGPIEIVEASLNCIEIKWRPPKDDGGCPITHYILERNQVGRNTWKKIGQIPG
EAHYKDTDVDHGRRYCYRIRAETSEGISEVMETEDVQAGTKAYPGPPSAPKVISAFKDCI
TLSWTPPSHTGGTNILGYNLEKCKKGSNVWSLVHPPEEPINSKKYACKDVVQGMEYEFRV
SAINISGVGEPSAPSEFVFARDPKKPPGKVIDLKVTGSTYNHLSLSWTKPKEAKGEQDEA
KGYFVEIRPAESTEWNRCNTNAIIMTSYTVKGLKSMAMYWVRVIAVNEGGAGEPQELNNY
ILAMPPPVRPRFTDSRIKSFMIVKAGNSGRFTINYVASPWPEVIWLKDSIPVSKRVTVSN
AEGRSQILIPSAERSDSGIYTIVVKNIVGQETFSVEIRVTDEPKPPGPVELEENVPGTVT
ITWVASPDEKRDDRLHYMVSKRDSVKQSWHTVADGIFNNRFTACNIMPGREYQFRVYAKN
DMGQSAHSESPKWFIAEKKEKYVVTLPESKHCNLEGPPKFLVPLKLHSAPQGYECYMSCA
VRGNPTPHVTWYRNNININTDTNYYITNTCGVCSMLILMVGPKDTGEYKVIAENPLGRAE
CSTNLTVRE
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagagatcaaaagttacagatcaaactgccacagggcagggtggaacagagaat
cagcctcccaagaaaaagggtaccaaaaggcgatcaaaggttcctggggttatgattaca
cagtatgtggaggaattgccagaggggaaatctactcctgatttcacccgcaaacccatt
gctttgaccattcaagaaggtaaattagccatctttaaagccaaagtgattggagaaccc
aagcccactgtgtcatggaagagagcgaaaggagaaatgaatgatccagaaaagttccag
aacaaatatgaccctgtaactaacgaatatactttagagatacctaaagtaagtggtgaa
gaagctgacacatacaaatgctatgctgtaaatgagtatggaaaggcagtctgtcctgtc
gtcctaaatatcattgaagttggattcaaaaagagtaaagaatttaaaaagacagccaat
ttggaggatccatcagagttcagaaacaagcttaggagaagtgttggcaaaaatgttgtt
gaaaaaaaggatggagaaattgatgaggcagtgtgggatctgttactgtctgctgataag
aaagactacgagcgtatttgtgctgaatatggcatcactgattttcgtggaatgctgaag
aaactgaatgagctgaagagagagcgagagcaagaacaggccttgttcattcagtacatc
agtaatctgagacaccttgaagtgaaatcagaaaattcagcaacttttgagctggacatg
gaactcaaggaccccaacagtcgcattttcctctataaagatggtgtcatggttccatac
agcaaagattcagaaagtgagctgaaacactacttgaagcaagttggaaaaaagtatgtg
ttcacagtgaaaaatcttagtcccgaggatgctggtatttatcaagtggatgtggaagga
gtcaacgtcttctcaacagatttcaagatcccccctgtggattttctggtgaagattcag
gaagtgaaggctgaagaaagagaagatgccatatttgagtgtgtgacttctctacctatg
aaccaaattttatggacactgaaaaataatccattatctaatagtgataaatatgagatt
accgtttctgaggacaaaatgattcaccgtttgaaagtcattgactgtatgcctgtggat
gctggaatctattgtgctgtggctggcataaaatcctgtagtgcctggcttgtggtagag
gctaataaaaatcctgccatgaaaggtaaaaagacagtccgcaagactacacaggctggt
ggcagtggagttgacctggctaaactggctgctgaacagcaagataaaaacaagaaggag
atgaaagatgctatggaagcagctaaaagagctaaggctgatcaagatgctgctgcagcc
aaagccaaagcagaagctgaagatgcactggcagcatcaagagctgctgcagctgcaaaa
gcagcagctgctgctcaagctgctgaggctgcacttgcgtcagcgaaagctaaaggcata
tcagagaaagatgccaaagcccaagctgaagcagcggctgcagctgcagcagcaaaggcc
caagctgaagctgaagcgaatgccagaaagttggctgaggccaaggctatggcagcaggg
atgagtgcaaatgacattgctaaggcaggagcagcagctgctgctatgcttaatgaaaat
atagctgcagcagagggacttggactgggcggagcaggcatgggtagaacaaagggggat
gcaggaggttctggtcttgcaggaggtgccaatgctacaggaagttctggtttttcagga
ggtgctgatctttcaggagtttctggtcttgcaggaggtgccagtcctacaggaggttct
ggttttgcaggaggtgctgatcctttaggaggttctggtctttcaggaggtgctggaggt
gtgggtcaagcattgaaggaaggtgctgatgctggggctgtatctggtgctaagtttaag
aagcatgaaagaacagaaatggatgacactgtcacagttatggtaggagaaccaagttca
cccgaagttgccccagtaaagcaaactggagaaccagaacagagtgaggaacagccagaa
caggatgagatggagccagagcagactgaagaacagccaaaacaggctaagaaacaaact
tgtgtcaggcaaggcccactactgccagacacagttactgttggaggcaacccacatggt
aacccaagcagtaacccgggtcataatccaagtggtaatccaggtcataatccaagtggt
aacccaggacataatccaagtggtaatccaggtcataatccaagcggtaacccaggtcat
aaacatggcagtaaccctggtcataatccaagcagcaacccaggtcataatccaagcagc
aacccgggacataacccaagtggcaacccagatggtaaactaaatggtaatccagatggc
aacccaagtggcaatccaggtggcaatggtgacaaacccgagggcaacgagggggctccg
cctgatggtgtggccactgaaggcacaaaagaagagtcagctgaggctggcaagcactca
ggctgcacaagacaaggtcctctgcttccagaggcaatcactgatcctggtgttcacttc
actgctggcctggaagactgcaggactattgtaggagaggcagctgagctggtctgcaaa
ctcagcagtgcagattgtaaggcgctctggtacaaagatggaaaagagatttctgattct
actgagggtatgactatcagcaaagatggtgctactcataaactgaaaatccacaaagta
tcagaggagtttgctggaaaatataaattagaggctgatggtcgtaaaactgaggctatg
atacttgttgaagatccaccaagatttgctacaaaagaccttgaggaatttgccaaacca
agagtggtcaaaaataatcataaagctgaattcaaaataccatatattggccgtgaggcc
actaaaatacagtggtataaagacggcgaggaacttacaacagatgcaaactgtaagatt
gaaactactgaaaacagctgccgtttgtctctcaacaaactacagcgcaaagacacaggg
gaaattaaaataaaaataaaaaatgagtttggcactattgaagcaactactaatctagtt
gttcttgacaaacccactccacctcttggacctattgagatagttgaagcttccttgaac
tgtattgagatcaaatggcgcccaccaaaagatgatggtggctgccctatcactcattac
atccttgagcgtaatcaagttggacgcaacacctggaagaagattggacagattcctggg
gaagcccattacaaagacactgatgtggatcatggtagaagatactgctaccgcatcaga
gctgagacatcggagggtatcagtgaggtaatggagacagaagatgttcaagctgggact
aaagcatatcctggcccaccatctgctcctaaagtgatcagtgccttcaaggactgcatc
accttgtcatggacccctccaagtcacactggaggaaccaacattctaggttacaacctt
gaaaaatgcaaaaagggcagtaacgtgtggagccttgtacatccaccagaggaaccaatc
aacagcaagaaatatgcttgtaaagatgttgtccagggcatggagtatgagtttcgagtt
tctgctatcaacatatctggagttggtgaaccaagcgcaccatcagagtttgtgtttgct
agagatcctaaaaaaccgcctggtaaagtaattgaccttaaagtaacaggctccacatat
aaccatttgtccctttcttggacaaaaccaaaagaagcaaagggagaacaggatgaagct
aaaggatattttgttgaaattagacctgcagagagcacagaatggaatcgctgcaatacc
aatgccattatcatgacctcctacactgtaaagggattgaaatcaatggccatgtactgg
gtgagagtgatagctgtgaatgaaggtggagctggagaacctcaggagctcaataactac
attctagctatgcctcctcctgtgagaccaaggttcacagattccaggataaagagcttc
atgatagtcaaagctggaaactcaggacgattcactatcaactatgtggcttctccatgg
cctgaggtcatctggcttaaggacagcattcctgtctccaaacgtgtcactgttagcaat
gctgaaggacgctctcaaatcctgattccatcagctgagcgctctgacagtggaatctac
accattgtagtaaagaatattgtcggccaagagaccttcagtgttgagatcagagtcaca
gatgagcctaaacctccagggcctgtggaactagaagagaatgtaccaggcactgtgaca
atcacttgggtggcctcaccagatgaaaaacgagatgatcgtctgcactacatggtgtcc
aagagggactccgttaaacaatcctggcacacagtggctgatggcatcttcaacaacagg
ttcacagcctgcaacatcatgccagggagagagtaccaattccgtgtctatgccaaaaat
gacatgggacaatctgctcactctgaatctccaaagtggttcattgctgagaagaaagag
aagtacgttgtaaccctgcctgagtcaaaacactgcaacctggagggtcctcctaaattc
ctagtccccctgaaattgcactcagctccgcagggctatgagtgctacatgagctgtgct
gtgagaggcaatcccaccccacatgtcacatggtaccgcaacaacatcaatatcaacaca
gacaccaactactacatcaccaacacgtgtggtgtctgctccatgctcatcctgatggtg
ggtcccaaagacacaggagagtacaaggtcattgctgaaaatccattaggtagagcagag
tgctccaccaacctgacagtcagagaataa
DBGET
integrated database retrieval system
