KEGG   Ictalurus punctatus (channel catfish): 108272284
Entry
108272284         CDS       T04658                                 
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X2
  KO
K06054  hairy and enhancer of split 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03460  Fanconi anemia pathway
ipu04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108272284 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108272284 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108272284 (her6)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108272284 (her6)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    108272284 (her6)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     108272284 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 108272284
NCBI-ProteinID: XP_017336094
Ensembl: ENSIPUG00000022742
UniProt: A0A2D0S020
LinkDB
Position
11:complement(25517555..25519716)
AA seq 270 aa
MPADMMEKNSSSPVAATPASMNTVPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGFSECMNE
VTRFLSTCEGVNAEVRTRLLGHLANCMTQLNAMNYTAQAHAGPAPPPPTFGQPVVQIPGA
THVPVPVSVPACKSAPPSGASPSDASKVYGGFQLVPATDGQFAFLIPSGAFTPGGPVIPV
YASGAATPLSAAAASPREASLTSDSVWRPW
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcctgctgatatgatggaaaagaactcgtcttccccggtggctgcgaccccggcgagc
atgaacaccgtcccggacaaacccaagacagcctccgagcacagaaagtcatccaaaccc
atcatggagaaaaggagacgagccaggatcaacgaaagcttgggtcagctcaaaaccctc
atcctggacgctctgaaaaaagacagctccagacactccaagctggagaaggcggatatc
ctggagatgaccgtgaagcacctcaggaacatgcagcgcgcgcagatgaccgccgctctg
aacgcggaccccaccgtgctcggcaagtaccgcgcgggcttcagcgagtgcatgaacgag
gtgacgcgttttctgtccacgtgcgagggcgtgaacgccgaggtgcgcacgcggctgctc
ggacacctggccaactgcatgacccagctgaacgcgatgaactacacagcgcaggcgcac
gccggacccgcgccgcctcctccgaccttcggacagcccgtggtgcagatccccggcgcg
acgcacgtgcccgtgcccgtctcggtgccggcgtgtaagagcgcgcctccatccggcgcg
tcgccgtctgacgcttccaaggtgtacggcggcttccagctcgtcccggctacagacgga
cagtttgccttcttgatccccagcggcgcgttcacccccggcggccccgtgatcccggtg
tacgcgagcggcgcagccacgcccctctcagcagccgccgcgtctccgcgcgaggcctcg
ctcacttcagactctgtctggaggccttggtag

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