KEGG   Ictalurus punctatus (channel catfish): 108272833
Entry
108272833         CDS       T04658                                 
Name
(RefSeq) protein Tob2
  KO
K14443  protein Tob/BTG
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108272833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108272833
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108272833
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108272833
SSDB
Motif
Pfam: BTG PAM2
Other DBs
NCBI-GeneID: 108272833
NCBI-ProteinID: XP_017337106
UniProt: W5UFY7
LinkDB
Position
12:29815214..29824430
AA seq 394 aa
MHLEVKVALNFIVSYLYNKLPRRRADLFGEELERILVSRFEGHWYPEAPLRGSAFRCLHL
GVPGDPVVDLAARRSGLDMEEVRANVPPELSIWIDPYEVSYQIGEKGAVKVLYMEDPPGL
GGEPEVSECLGGLCKGDVELEDGKNLGFNPDAQVFVPIGGQASPVMLPSLSNSPTPLCQG
LFSYAGSSTPTDPTVHSNTSSPSPPSTGMPYPHPAAQPSSRPTPQQITFTTASFAATKFG
STKMKKCMGNGVVGGSGSVSAPQQRMLSHSPTAMSSISPPGLVKHKPLSLSMHSLAGPVS
SQLSPNAKEFVYPASQGPLYFEAEAPHLTHTGPFQTPLPGPAHPHATFDPFSSQPPGHAM
GVMGSGSGISFMEGLGGYNLQYSSQAFQPVVLAN
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgcatttagaggtgaaagttgcactgaacttcatagtgtcctacttgtacaacaagctc
ccacggcgaagagcggatctgttcggagaggagctggaacgaatcttggtgtcacgtttt
gaaggtcattggtacccagaggctccgttacgtggttctgccttccgctgtcttcatctt
ggggtccctggggaccccgtggtggacttggcagccagacggagtgggctggacatggag
gaagtccgtgccaatgtccctccagagcttagcatctggatcgacccttatgaagtgtcc
tatcagattggcgagaaaggggctgtgaaagttctctacatggaggatccgccaggtttg
ggtggtgaacctgaagtatcagaatgcttaggagggctttgtaaaggagatgtagagctg
gaagatgggaagaatttgggcttcaaccctgacgctcaggtctttgtgcccataggtggc
caagcatcaccagtcatgcttccatcactctctaattcacccacaccgctctgtcaaggt
ctgttcagctacgcaggttccagtactccaacggatcccactgtgcactctaacacctcc
tctccatctccaccaagtacagggatgccctaccctcacccagctgcccaacccagctcc
cgtccgactccacaacaaatcaccttcaccaccgccagctttgccgccaccaagtttggc
tccaccaagatgaagaaatgcatggggaacggggtggtgggtggatctggcagtgtcagt
gctcctcagcagcgaatgctgagccattcccccaccgcaatgtcctccatttcaccacct
ggactggtgaagcacaaacccctatcactctccatgcactccctggctggtccagtctcc
agccaactctcacccaatgccaaagagtttgtctaccctgcctcccaggggcccctctat
tttgaagctgaggctccacacctgacccacactggcccattccagacaccgcttccaggc
cctgctcacccacatgccacctttgatccattctccagccagccaccaggccatgctatg
ggtgtcatgggaagcggcagtggaatttctttcatggagggtctggggggctacaacctg
cagtactctagccaagctttccaacctgtagtattggctaattaa

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