Ictalurus punctatus (channel catfish): 108272833
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Entry
108272833 CDS
T04658
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108272833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108272833
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108272833
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108272833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
108272833
NCBI-ProteinID:
XP_017337106
UniProt:
W5UFY7
LinkDB
All DBs
Position
12:29815214..29824430
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AA seq
394 aa
AA seq
DB search
MHLEVKVALNFIVSYLYNKLPRRRADLFGEELERILVSRFEGHWYPEAPLRGSAFRCLHL
GVPGDPVVDLAARRSGLDMEEVRANVPPELSIWIDPYEVSYQIGEKGAVKVLYMEDPPGL
GGEPEVSECLGGLCKGDVELEDGKNLGFNPDAQVFVPIGGQASPVMLPSLSNSPTPLCQG
LFSYAGSSTPTDPTVHSNTSSPSPPSTGMPYPHPAAQPSSRPTPQQITFTTASFAATKFG
STKMKKCMGNGVVGGSGSVSAPQQRMLSHSPTAMSSISPPGLVKHKPLSLSMHSLAGPVS
SQLSPNAKEFVYPASQGPLYFEAEAPHLTHTGPFQTPLPGPAHPHATFDPFSSQPPGHAM
GVMGSGSGISFMEGLGGYNLQYSSQAFQPVVLAN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagaggtgaaagttgcactgaacttcatagtgtcctacttgtacaacaagctc
ccacggcgaagagcggatctgttcggagaggagctggaacgaatcttggtgtcacgtttt
gaaggtcattggtacccagaggctccgttacgtggttctgccttccgctgtcttcatctt
ggggtccctggggaccccgtggtggacttggcagccagacggagtgggctggacatggag
gaagtccgtgccaatgtccctccagagcttagcatctggatcgacccttatgaagtgtcc
tatcagattggcgagaaaggggctgtgaaagttctctacatggaggatccgccaggtttg
ggtggtgaacctgaagtatcagaatgcttaggagggctttgtaaaggagatgtagagctg
gaagatgggaagaatttgggcttcaaccctgacgctcaggtctttgtgcccataggtggc
caagcatcaccagtcatgcttccatcactctctaattcacccacaccgctctgtcaaggt
ctgttcagctacgcaggttccagtactccaacggatcccactgtgcactctaacacctcc
tctccatctccaccaagtacagggatgccctaccctcacccagctgcccaacccagctcc
cgtccgactccacaacaaatcaccttcaccaccgccagctttgccgccaccaagtttggc
tccaccaagatgaagaaatgcatggggaacggggtggtgggtggatctggcagtgtcagt
gctcctcagcagcgaatgctgagccattcccccaccgcaatgtcctccatttcaccacct
ggactggtgaagcacaaacccctatcactctccatgcactccctggctggtccagtctcc
agccaactctcacccaatgccaaagagtttgtctaccctgcctcccaggggcccctctat
tttgaagctgaggctccacacctgacccacactggcccattccagacaccgcttccaggc
cctgctcacccacatgccacctttgatccattctccagccagccaccaggccatgctatg
ggtgtcatgggaagcggcagtggaatttctttcatggagggtctggggggctacaacctg
cagtactctagccaagctttccaacctgtagtattggctaattaa
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