Ictalurus punctatus (channel catfish): 108273523
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Entry
108273523 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108273523
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108273523
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
DUF4407
SOAR
Serine_rich
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
108273523
NCBI-ProteinID:
XP_053541236
UniProt:
A0A9F7RFH5
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Position
13:28917348..28925860
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AA seq
557 aa
AA seq
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MEAEGNNTMGSSCLDQKECQNSTAGSTPFSNMKQKEEKIQKNAQEEPGEKSCPREDGPPC
EDDVLCDSCIESPRKAKKSCLTCLVSYCEDHLRPHLEKEKFQSHRLVKPLKDVEIRMCET
HNVPLELFCCVETSCVCEKCVSEQHHGHETLSITEARQKMEKELQEKQTELVKTVTAAEN
SINKLQSCILSVEACVCEVRSVLQQQVSALQAGVEEVRAELTKVLEAEMKNTLGQVGGAR
VCVVQRCDELKRAHTHLDKLSKNKNSVDFLQEYSQWRKTSSDVSLPEVCVTQTDRLQSFG
RIITHTTQELCDILLTAYRNSLKEFCTTDDNLHQPTVHPLSPVQQNITLPEPQSRDDFLK
YASPLMFDGDTVHQFLRVTEGGRKLTNTTPWQHSYPEHPERFQHWKQALSTQSFSSGRHY
FEMDLSGAGVHVGVTYVGILRQSNQNEACLTGSSVSWCVEWSGRGFSAWHGGVETPLSTP
KATRLGVCVDFGCGTVMFYSVRGEAEGGMELLHRFETELREPLYAAVFLPKKENVVVLVE
PGEELPLKSPLSPCSPP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaaggaaacaatacaatgggttctagctgcctggatcagaaagagtgccag
aacagcactgcagggagtactccattttcaaacatgaagcagaaagaggagaagatccag
aaaaatgcccaggaagaaccaggagaaaagtcatgcccaagagaggatggacctccgtgt
gaggacgacgtactttgtgactcgtgtattgaaagtccacgcaaagctaagaagtcgtgc
ctgacatgtctggtttcctattgcgaggatcatctgaggccacatctagaaaaggagaag
tttcagagtcaccggctggtgaagccactgaaagatgtggaaatacgcatgtgtgagaca
cacaacgtcccgctggagttgttctgctgtgtcgaaacttcttgtgtgtgtgagaaatgt
gtgtccgagcaacaccatggacatgaaaccctgtccattacagaggcacgccagaaaatg
gagaaagagctccaggaaaaacagacagagctggtgaagacggtgacagcagctgagaat
tccattaacaaactacagagctgcattctctctgtagaggcgtgtgtgtgcgaggtgcga
tctgtgctccagcagcaggtgagcgctctgcaggcgggggtggaggaggtgagggcagag
ctcaccaaggtattggaggcggagatgaaaaacacactggggcaggtgggcggagctcgt
gtgtgtgtggtgcagcgctgtgatgagctgaaaagagcacacacacacctggacaaactc
agcaagaacaagaacagcgtcgacttcctgcaggaatactcccaatggaggaagacgagc
tcggatgtgtctctgcctgaggtgtgtgtcactcagacggaccgtcttcagtctttcggc
cgcatcatcacacacaccacgcaggaactgtgtgacatattgctcactgcataccgcaac
tcactcaaagagttctgcacaaccgatgataatctccatcagcccacagttcatcccctc
agtcctgtacagcagaacatcacgctgcctgagccgcagagcagagacgacttcctcaaa
tatgcgtctccgttaatgtttgatggtgacacggtgcaccagttcctgcgtgtgactgaa
ggtggcaggaagttgaccaacaccacgccctggcaacacagctaccctgagcatcccgag
cgcttccagcactggaagcaggcactctccactcagagcttctcctcagggcgccattac
tttgagatggacttgagcggtgcaggggtccatgtcggcgtgacgtacgtggggatccta
cggcagagcaaccaaaatgaggcgtgcctcacaggcagcagtgtctcctggtgtgttgag
tggagtgggcgtggtttctcggcctggcacggcggcgtggaaacccccctgagcacccca
aaagccacgagactgggcgtgtgcgtggatttcgggtgtggcacggtgatgttttacagc
gtgagaggagaagcagaaggagggatggagcttctgcatcggtttgagacggagctgaga
gagccgctctacgctgctgtgttcctcccaaagaaggagaacgttgtggtgctggtggaa
cctggagaggaacttccactcaagagccccttatctccatgttctccaccgtga
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