Ictalurus punctatus (channel catfish): 108274069
Help
Entry
108274069 CDS
T04658
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108274069
04020 Calcium signaling pathway
108274069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274069
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108274069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
108274069
NCBI-ProteinID:
XP_053541364
Ensembl:
ENSIPUG00000018742
UniProt:
A0A9F7TLA0
LinkDB
All DBs
Position
13:13833385..13959660
Genome browser
AA seq
2253 aa
AA seq
DB search
MLVILLNCVTLGMFHPCEDSDCDSERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLPVNFSVPQSLPNYYHVDDESPFIC
SQMGDNGMRHCNSIPRLHEEGLQCQLDMGAYNSTDNTTCVDWNQYYTNCSAGDVNPFKGA
INFDNIGYAWIAIFQVITLEGWVDIMYFVMDAHSFYNFIYFIFLIIVGSFFMINLCLVVI
ATQFSETKQRESQLMKEQRVRFMSNASTLASFSEPGSCYDELLKYLVYIVRKATRQLGHL
MRAAARRAGIRICTSPTPEPPNAKRRRHRKQQGSIHHLVHHHHHHHHHYHLGNGNIRSDG
AQEMEVSLRNNNRNGAGTGRLTLPTIVPLQDPSPSCSAALGSSSAESIHSTYHRTCHLDP
NRAPTLGHPVLQAYKRNSVPFAAPVHKNYPTLQPRVALEQLRQRALDPGGACCTANILSN
LNIPPLHVNTSQCLLDTQGPAGNSSRKLSNTNCSGTNLDAMLTFDPETCPYCIKSVGNDS
EGLEANETADSDSEGVYEFTQDTHYRDGRDLNRKKKFTLGARAVKVVHFWRLVCDTFRKI
VDSKYFGRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSLFSLEMLLKLLVYGP
FGYIKNPYNIFDGIIVVISVWEIVGQQGGGLSVLRTFRLMRVLKLVRFMPALQRQLVVLM
KTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGSERDGDTLPDRKNFDSLLWAIVTVFQI
LTQEDWNKVLYNGMASTSPVAALYFIALMTFGNYVLFNLLVAILVEGFQTEGDGSKSGSE
ADFYTQTIDDVCRSKKDVSASSVVPINGHMDLKASITPPLITHTAATPMPVPKISGGDDL
ALGYESRRGSNVSVEPGCHEKTPSSVRSSPHAPWSSSSSWNSRRSSWNSLGRAPSLKRQK
QQSGERRSLLSGDGHSSSDEDGAGGGSGRGRTLEGDNVSLSRTDSFGQRPRHRRMESLET
RSSFDLPPDTLQVPYLHRSASIHSTRPPNLISNGKSSPTGATMQLSLDDHHSEDDNADEE
GNLSRRARLYRWLEHKQPEWCRQRNTWSLYLFPPESRIRVSCNKIITHKMFDHVVLVIIF
LNCITIAMERPKIEAKSPERIFLTVSNYIFTAIFVTEMTIKVVALGWCFGEKSYLKSSWN
ILDGMLVLISVIDILVSLISNSGTKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMS
SLKPIGNIVVICCAFFIIFGILGVQLFKGKFYVCQGEDTRNITNKSDCHLAKYKWVRHKY
NFDNLGQALMSLFVLASKDGWVDIMYDGLDAVGVDQQPVMNHNPWMLLYFISFLLIVAFF
VLNMFVGVVVENFHKCRRHQEAEEAKRREEKRLKRMEKKRRKAQCKPYYSDYSPTRRLIH
KMCTSHYLDLFITIVIGLNVITMSMEHYQQPKVLDEALKICNYIFTIIFVLESVFKLVAF
GFRRFFKDRWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKM
AVGMRALLDTVIQALPQVGNLGLLFMLLFFIFAALGVELFGDLICDDLHPCEGLGRYATF
KNFGMAFLLLFRVSTGDNWNGIMKDTLRDCAHDTGTCYNTVVSPIYFVSFVLTAQFVLVN
VVIAVLMKHLEESNKEAKEEAELEAEMELEAAGGDGGMTGVHISPLALRDIGGPAGPHWI
SRASQDRGYPPDSPSAPMRRDSTAHKTDQPQGLEPPLQNADPPDPSTESLQPHEHLEEHL
LCVKKISVGRAHSLPNDSYMYLPHQPILSSTTLMTSAQQTQSGSISSVQSQTEEPAQHLT
VPTDLFRPISPHSLSDSECIPRIPPPRRGHTLSRTLRRQVAVSTDSQEALYTKGGENEGP
KGLGELSTPPTTFPALQQFRQPSLFLIPATPGASPKPMRGSVHTQHNPHDQYNICSRHQC
SPPTHDKPAEVDSVDQEVSQIIQSGFEDYKGQDCIRGGGIGGGLCEGRCPSLRQLKKYHS
ADVQCRRAPLLLPRPSSWLDDPRRHSIEVCPSVESSPQRSSVSSGFVSRADSLQQPSPRT
QKKKMSPPCISVDPPEGLVLPRDFQLVLDTGMGTVPPSLPSRDTCLRRRAPSSESKDSFD
LGGGGDGLPQEGVSNPKLLTLPNFSFEKTSSEH
NT seq
6762 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgatcctgctgaactgtgtgactttgggcatgtttcacccatgtgaggacagt
gactgtgactcagaacgctgcaagatcttggaggatttcgacgacttcatttttgcattt
tttgctgtggagatggtgattaagatggtagcactgggcatctttggcaaaaagtgttac
cttggggatacctggaatcggctagacttcttcattgtgctggctgggatgctggaatat
tcgctgaacctgcagaatgtcagtttctctgctgttcgtactgtcagagtgctgaggcct
ctacgagcgatcaaccgagtgcccagtatgagaatcttggtgactctcctgctggacact
ctccctatgctgggcaatgtgttgctgctctgcttctttgtcttcttcatctttgggatt
gttggagtccagctctgggctgggctgctccgtaaccgctgcttcctgcctgtgaacttc
tctgttccccaaagcctgcccaattactaccacgttgacgacgagagcccattcatctgc
tctcagatgggggataatggcatgcgccactgcaactccatacctaggctgcatgaggag
ggtctgcaatgtcagctggacatgggagcctacaacagcacagataacaccacatgtgtc
gattggaatcagtactataccaactgctctgctggggatgtcaacccttttaagggtgcc
atcaactttgataacataggctatgcctggattgccatttttcaggtcatcactctggag
ggttgggtggacatcatgtactttgtaatggacgcacattccttctacaattttatctac
ttcattttcctgattatagtgggctcattcttcatgatcaacctctgcctagttgtcata
gccacccagttctctgaaacaaagcagcgtgaaagtcagctgatgaaggagcagagagtg
cgattcatgtccaacgcaagcactctagccagcttctcagagccaggtagctgctacgat
gagctcctcaaatacctggtttacattgttcggaaagctaccaggcagttaggccaccta
atgcgggcagctgctcgccgggcaggcatcaggatatgcacctctcccacccctgaacct
ccaaatgccaagagacgaaggcacaggaagcagcagggctccattcatcaccttgtacac
catcaccatcaccaccaccatcactaccatcttggcaatgggaatatccggagtgacggt
gcccaggagatggaggtgtctctgcggaacaacaacaggaatggagcaggaacgggacgt
cttactctacccaccattgtgcctctgcaggacccatccccttcttgctctgcagcgctg
ggctccagcagcgccgaatctatacacagcacctaccacaggacctgccacttggatcca
aatcgtgcccccacattaggtcatccagtgttgcaggcctacaagaggaactcagtgccg
tttgccgcaccagtgcataagaattatccgactctgcagcctcgtgtagccctggaacaa
ctcaggcagagggcgctggatcctggaggagcctgttgcactgccaacatcctcagcaac
ctcaacatacctccactccatgtaaacacatcccagtgcctgctggacacacaagggcct
gcagggaattcttcacgcaagctctccaataccaactgcagtggtacaaatttggatgct
atgctgacgtttgaccctgagacctgcccttactgtatcaaatcagtgggtaatgactca
gagggacttgaagcaaatgagactgcagactcagacagtgagggagtgtatgaattcaca
caagacacacactatcgggatggcagagacctaaataggaagaagaagtttaccttaggt
gctcgggcagtgaaggtagtgcacttctggagactagtgtgtgacacattccgcaagatt
gtagacagcaaatattttggacgaggcatcatgatcgccatcctcatcaataccctcagc
atgggaatcgagtaccatgagcagcctgatgagctaaccaatgcactggagatcagtaat
attgtgtttaccagtctcttttccctggagatgctcctgaagctgctggtatatggccct
tttggctacatcaagaacccttacaacatttttgatggcattattgtcgtaataagtgtg
tgggagatcgtgggccagcagggtgggggtttgtcagtgctgaggaccttcaggttgatg
cgggtgctgaagctggtgcgcttcatgccggcgctgcagagacagctcgtggttctgatg
aagactatggacaatgtggctactttctgcatgctgctgatgctctttatcttcatcttc
agtattttgggaatgcacctgtttgggtgtaagtttggttcagagagagatggtgacaca
ttgcccgaccgcaagaatttcgactctttgctctgggccattgtcacagtgtttcagatc
ctcacccaggaagactggaataaggttctctataatggcatggcctccacctcacctgtc
gcggctctctacttcatcgccctaatgacctttgggaattacgttctgttcaacttactg
gtggctatcttagtggagggcttccagacggagggggatggctccaagtcaggctcggaa
gcagatttctatacacaaaccattgacgatgtgtgcagaagcaaaaaagatgtgtcggct
tcatctgtagtacccatcaatggccatatggatctgaaggccagcattacacctcctctt
atcacccacacggctgcaacacccatgcctgtgcccaagatctcaggaggagatgacctc
gctttgggatacgagtcacgcaggggcagcaatgtttctgtggagcctggctgccatgaa
aagactccgtcaagtgtgcggagctccccgcatgccccctggagttccagcagcagctgg
aacagtcgacgctccagctggaacagtctaggccgagcaccgagtttgaagaggcaaaag
cagcagtcgggtgagcgacgctccttgctctccggagacggccactccagctctgatgag
gatggtgctggagggggcagtggcagaggaaggacgttggaaggggataatgtttccctc
agcaggacagattcttttggtcaaaggccacggcataggcgtatggagtctctggagaca
cgcagctccttcgacctgcctccagacacgctgcaggtgccgtacctgcacagatcagct
agcatccacagcacacggccaccaaatctgatcagcaatgggaagagctcacccacgggg
gccacaatgcagctctcattagatgatcatcacagtgaggatgacaatgctgatgaggag
ggaaacttgagtcgacgagcacgtctgtaccgctggctggagcataagcagcctgaatgg
tgtaggcagagaaacacctggtctctctacctgtttcctcccgagtccaggattcgtgtg
agctgcaataaaatcatcacgcacaagatgtttgaccatgtggtgcttgttattatcttc
ctcaactgcatcaccattgccatggagaggcccaagattgaggcaaagagtcctgagcgt
atattcctgacggtgtccaactacatcttcacagccatcttcgtgactgaaatgacaata
aaggtggtggccctgggctggtgttttggagagaagtcatacctgaagagcagctggaat
attttggatgggatgctggtgctcatctcagtcattgacatactggtgtctttgatttca
aacagtggcactaagatcttgggcatgctgcgtgtgctgaggctgctgagaactcttcgc
cccctccgggtgatcagcagggctccagggctcaagttggtggttgaaactctgatgtca
tcccttaaaccaattggaaacattgtggtcatctgctgcgccttcttcattattttcggc
atcttgggggttcagctgttcaagggaaagttctatgtgtgccagggggaggatacaagg
aatataacaaataaatctgactgccatcttgctaaatacaagtgggttaggcacaagtac
aattttgacaacctgggacaggctctgatgtctctttttgtactggcctctaaggatggc
tgggtggacattatgtacgatggactagatgctgtaggggttgatcaacagcctgtgatg
aaccacaacccctggatgctgctctattttatctctttcctgttgatcgtggcttttttc
gtgctcaatatgtttgtgggtgtggtggtggagaacttccacaagtgtcggcgacaccag
gaagctgaagaagccaagcggcgcgaggagaaacgcctgaaaaggatggagaaaaagaga
aggaaggctcagtgtaagccttactactctgactactctcccactcgtcgcctcatccac
aagatgtgcactagccactacctggatcttttcatcaccatcgtcataggcctcaatgtc
atcactatgtccatggagcactaccagcagcccaaggtgctcgatgaagcgctgaaaatc
tgcaactacattttcaccattatctttgtgctggagtctgtcttcaaacttgtggcattt
ggattcagacgtttcttcaaagacaggtggaaccagttggatctagctatcgtgctgctc
tccattatggggatcactctggaggagatcgaggtcaacgcctcactccccatcaaccct
accatcatacgaatcatgagggtgttacgcattgcccgcgtgttaaagctcttgaagatg
gctgtgggaatgcgagctctgttggacaccgtgatccaggccctgcctcaggtggggaat
ctgggtcttctcttcatgcttctcttctttatcttcgcagcactgggagtagaactgttc
ggtgatctgatatgtgatgatttgcacccctgtgagggccttgggcgctacgccacattc
aagaactttggcatggcctttctcctgctgttccgtgtgtccactggggacaattggaac
ggcattatgaaggacacactgcgagactgcgctcatgacactggaacatgctacaataca
gtggtgtctcccatctactttgtgtcctttgtgctgacggctcagtttgtgttggtcaac
gttgtaatcgccgtcctcatgaagcacctggaagagagcaacaaagaggctaaggaggag
gctgagctagaggcagaaatggagctggaagcagcaggcggagatggagggatgactgga
gtacacatttcccctctggcactgcgagacataggtgggcctgcggggcctcactggatc
tccagagcctcacaggacagaggttatcccccagacagcccatcagcacccatgcgcaga
gactcaacagcacacaagacagaccagcctcaaggtctggagcctccattacagaatgca
gatcctccagacccctcaacagagtctttacagccacatgaacatctggaagagcaccta
ctatgtgtgaagaagatttcagtggggcgtgcacactccttaccaaatgacagctacatg
tacctgccccaccagcccatcctgtcctcaacgacccttatgacctcagctcagcagact
cagtcaggctccattagctctgtacagtctcagacagaagagcccgcacagcacctgact
gtacctacagatctgttccgccccatcagcccccacagcctgtctgactcagagtgtatt
cccagaattcctccccctcgccggggacacacactctcccgcaccttgcgccgacaggtg
gcagtgagcactgactctcaggaggccttgtacacaaaaggaggggagaatgagggcccc
aaggggcttggtgaactctccactcctcccactacattcccagcactgcagcagtttcgc
caaccatcactcttcctcattcctgcaacaccaggcgcctctcccaaaccaatgcgcggc
agtgtgcacacacagcacaacccccatgatcaatacaacatctgctccaggcaccagtgc
tctcccccgacccatgataagcctgctgaggtggactcggtggatcaagaggtgtctcaa
ataatccaatcaggatttgaagattataaaggtcaagattgcattagaggaggtggaatt
gggggagggctgtgtgaaggccgctgtccatctctgaggcagttgaagaagtatcacagt
gcagacgtgcagtgtaggcgggcaccactactactgcctcggccctcttcctggcttgat
gacccacggcgccactccatcgaggtttgtccatcggtagagagcagcccccagagaagc
tccgtgtcttctggttttgtgtcacgtgcagacagcttacaacagccctcgccccggacc
caaaagaagaagatgagccctccttgcatctctgtggatcctccagaggggctggtgctt
ccaagggacttccagctagtgttggacactgggatgggcacagtgccaccatctctgccc
agcagggacacctgcctgagaagaagagccccctccagtgaatccaaggactcattcgat
ctgggtggaggaggagatgggttgccccaagagggggtttctaaccccaagctattaact
ctgcccaatttctcctttgagaagacaagctctgagcactga
DBGET
integrated database retrieval system
