Ictalurus punctatus (channel catfish): 108274436
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Entry
108274436 CDS
T04658
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108274436
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108274436
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Gene cluster
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Tricorn_PDZ
Baculo_LEF5_C
AAA_23
YABBY
PIEZO
Motif
Other DBs
NCBI-GeneID:
108274436
NCBI-ProteinID:
XP_017340099
Ensembl:
ENSIPUG00000004724
UniProt:
A0A2D0SBI7
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Position
14:complement(12083334..12109167)
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AA seq
551 aa
AA seq
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MERKVAREFRHKVELLIDNEAEKDYLYDVLRMYHKSMDLTVLVGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDNLTPKRSRKLKEVRLDRTHPEGLGLSVRGGLEFGCGLFISQIVKD
GQAGTVGLQLGDEIVRINGYSISSCIHEEVVSLIKTKKTVSLKVRHVGMIPVKSSADEPL
KWQFVDQFVSESGEKKSSVAGLASIGGNDIKEKKVFLSLVGTKGMGISISSGPTQKPGIY
ISNVKPGSLSAEVGLQVGDQIVEVNGVEFNNVDHKEAVRVLKSSRSLTITVLTGAGKELF
MTDEEKLAVEARREIERQELMQQKRVAMETNKIMKEQQEKERLRRMEISQKAAEEEERYR
NEMEKIEAEEKKHNRQWEEDWGSREKSKSPSPVPSPSPPSRSPTPSKPRSSAAEANTDED
EEIEGREGFQKYVDDFDPYTMFTPEQIEGKDVRLLRIKKEGPLDLAVEGGIDSPLGKLVV
STVYQGGSADKHGGVVAGDEIMAVNGKILTDVTLTEGQNSLARAWNSGGDWIDLVIAVSA
PKEYEDEVTFF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaagtagctcgagaatttcgccataaggttgagttgctgattgataatgag
gcagaaaaggattacctgtatgatgttctgcgcatgtatcataagtctatggacctgact
gtcctggtgggggatttgaagctggtgattaatgaaccgaaccgcctgcccctgtttgat
gccatccggcctcttatccctctcaaacaccaggtggagtatgacaaccttacaccaaag
agatccaggaagctaaaggaagtgcgcttggaccgcactcaccctgaaggcttgggtctg
agtgtacgaggtggcctagagtttggctgtggactcttcatctcacagattgtaaaggat
ggacaggctggaactgtgggcctgcagctgggggatgagattgtgcgcatcaatggctat
tcaatttcctcatgcatccatgaagaggttgtcagccttatcaagactaagaagactgtg
tcacttaaagtccgacatgtgggaatgattccagtaaagagttccgctgatgaacctctt
aaatggcaatttgtggatcagtttgtgtctgaatcaggggagaagaagagcagtgttgct
ggcctggcctccatcggaggaaatgatatcaaggagaaaaaggtgttcctcagcctggtt
ggcaccaaaggcatgggcatcagtatctcgagtggaccaactcaaaagccagggatttat
atcagcaatgtaaagcctggctctctgtctgcagaagtgggccttcaggttggtgaccag
attgtcgaggtcaatggggtggagttcaataatgtggaccacaaggaggcagttcgagtg
ctgaagagcagccggagtctaactatcacagtcctcactggagctggcaaagagttgttc
atgacagatgaggagaagctggcagtagaagctcggcgagagattgagcgccaggagctc
atgcagcagaaaagagtggcaatggagaccaacaaaatcatgaaagagcagcaggagaaa
gagcgtctgagaagaatggagatttcgcaaaaggctgcagaggaagaggaacgatacaga
aatgagatggaaaagattgaggctgaagagaaaaagcataacagacaatgggaggaagac
tggggttccagagagaagtccaaaagtccatctcctgtcccttctccttcacctccatca
cgttctccaactccttcgaaacccaggagctcagctgctgaagctaacactgatgaagat
gaagaaatagagggcagagaaggcttccagaaatatgtggatgacttcgatccctataca
atgttcacccctgagcagatagagggaaaagatgtgcggctgctgagaattaagaaggag
ggcccactggatctcgctgtggaagggggaatagactctccactgggaaaacttgtggtt
tcaactgtttatcaaggaggctcagctgataagcatggtggagtggtggccggtgatgag
attatggcagtaaatggaaaaatcctgacagatgtgaccctgactgaaggacagaactct
ctagctcgggcctggaacagtggaggggactggattgaccttgtgatagcagtttctgca
ccaaaggaatatgaagatgaagtgacattcttctaa
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