Ictalurus punctatus (channel catfish): 108274590
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Entry
108274590 CDS
T04658
Symbol
hcn4l
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274590 (hcn4l)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
108274590 (hcn4l)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
108274590
NCBI-ProteinID:
XP_017340291
Ensembl:
ENSIPUG00000017571
UniProt:
A0A2D0SCU5
LinkDB
All DBs
Position
14:complement(18016497..18036148)
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AA seq
1167 aa
AA seq
DB search
MDRLHSSMRKRLYSLPHQIGHKSDEGDVDARRKSVRMKSLAPSVSPEAARGDPDALSALR
GKSNGDCRRFKGSLSSVTSRHGADAEAHEQKRLIAEEEVDNGGGSPEEDGAAEAGARGGA
AGGTESQRSASDEHATFIKLEDVEEMAPDDERLYETGFVHRQLGAMLQPGVNKFSLRMFG
SEKAVEREQERIKSVGSWIIHPYSDFRFYWDLIMLLLMVGNLIIIPVGITFFKDEHTPAW
IVFNVVSDTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVRYLRSWFAVDFISSIPVDYI
FLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAM
VRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSKNKMVNDTWGQQYSYALFKAMSH
MLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVE
QYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREEIISFNCRKLVATMPL
FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVLTVLTKGSKETKISDG
SYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRQAFETVALDRLDRIG
KKNSVLQHKVQRDLNSGVLNFQENEIIQQIVQHDRDMAHCAHLMQNPSPGPHTTPAPSSH
TPVIWAPLIQAPLQAAAATTSVAIALTRHPHLPHTLFRPPVPMLSSLKDPPRHFKRFPVV
SGVTALGSSSSASSQLGSGVETPILDTLRAKSSARASTSPLPSASSSLPSSTTTTITTIT
SSISEASTFSQRPLSTGGSGFSSVAQLHPQPQLPHASFTSISAPLPGFFQKGAVGRDLAQ
FAIPSASTITPLIAHSISPILTQLQSTQPKPLQVQCSQEVSKPVRTTTPSPSTGSPLFSA
NLLKPTVPNPQTQDPQSNDHLLQLSHEPSALASLAQYGSGNASPSSTPPAWSPTFQSPMV
QRKQAPINSNPSSTSGSQSSLLSPQTLCPLPSQSQERVGSLVDLPSQDLSTISLSLPSPR
PFERPKLLRQGPHVPDQSHLVSMSGFSHASFPTPVTKPYSSIPGHVALSRQTSIVFQPQT
GSSGSPGSRDSSIPGTPSLHPKLPSNL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcattcttccatgcgcaagcgtctctacagcttgccccatcaaatcgga
cataaatcggacgagggcgacgtggacgcgcggaggaagagcgtacgcatgaagtcgttg
gcgccgtcagtctctcctgaggccgcgagaggcgatccagacgcgctcagtgcgctcaga
ggcaagtcgaacggcgactgccggaggtttaaagggagcctgtcgtctgtcaccagccgc
cacggagcggacgccgaagcgcacgagcagaagcgcctcatcgccgaagaagaagtcgac
aacggcggtggaagtccagaggaggatggagcggcggaggcgggcgcgcgcggcggcgct
gctggtggcacggagagccagcgctcggcctccgatgagcacgcgactttcatcaagttg
gaggacgtcgaggagatggcacccgacgacgagcgcctctacgagacaggcttcgtgcac
cggcagctgggcgccatgctgcagcccggagtcaacaagttctctcttcgcatgttcggt
agcgagaaggcggtggagcgcgaacaggagcgaatcaaatcggtcgggtcgtggataatt
cacccgtacagcgacttcaggttctattgggatctgataatgttgcttttgatggtggga
aatctgatcatcatcccagtgggcatcacattcttcaaagatgaacatacaccagcctgg
attgttttcaacgtggtctctgataccttctttttagtggacctagtcctgaacttccgg
actggcattgtgaaagaggacagcacagagatcatcctggacccacagcagataaaggtg
agatacctgcgcagctggtttgccgtggacttcatctcctctatccctgtggattacatc
ttcctcatcgttgagacacggattgactcagacttctacaagacagccagagctttgagg
atcgttcgcttcactaagattctgagtttgctcaggttgctgcgactgtcccggctcatc
cggtacattcatcagtgggaggagattttccacatgacctatgacctggctagtgctatg
gtgcgtatagtgaacctgattggtatgatgctgttgctgtgccactgggacggttgtctg
cagttccttgtgcccatgcttcaggactttcctgccgactgctgggtctccaaaaacaaa
atggtgaacgatacttggggtcagcagtactcctacgccctgtttaaggctatgagccac
atgctgtgtattgggtatggcatgtacccacccgtgggcatgacagacgtgtggctgacc
atcctcagtatgattgtgggtgccacctgctatgccatgtttgtgggccatgccactgcc
cttattcaatcactagactcatctcgaaggcaataccaggagaagtataaacaagtggag
cagtacatgtccttccacaagcttcctgctgacatgcgccaaaggatccatgactactat
gagcaccgttatcagggcaagatgtttgatgaagagagcattcttggagagctgaatgag
ccactccgagaggagatcatcagtttcaactgtcgaaagctggtggccaccatgcctttg
tttgctaatgcggatcccaactttgtaacctccatgcttaccaagttacgctttgaagtc
ttccagccaggagactacatcattcgggaaggcaccataggaaagaaaatgtatttcatc
caacatggggtgctaacagttctgaccaagggcagtaaagagacaaagatttcagatgga
tcttactttggagagatctgtttgctgactcggggcagaagaacagccagtgtgagagca
gagacatactgccgtctatactctctatctgtggacaactttaatgaagtgttggaagag
tatccaatgatgcgtcaggcttttgagacagtagcccttgatcgtctagatcgcattgga
aagaaaaactctgttctccagcacaaagtgcaacgagatctcaactcaggtgtgctgaac
tttcaggagaatgaaattatccagcagattgtacagcacgatagggacatggctcactgt
gcccacctaatgcagaacccctcgccaggtcctcacacaaccccagctccttcctctcac
actccagttatctgggctcctctcatccaggctccactccaagctgctgcagccactacc
tcagtggctattgcccttacccgccacccacatcttccccatacacttttccggcctccg
gtacccatgctgagttcgctgaaagatccaccacgccattttaaaaggttccctgtggtt
tctggtgttactgcgttgggtagctcatcctcagcaagttctcagcttggctctggagtg
gagacacctattttggatacactgagagccaagagttcagcaagagcttccacgtctcca
ttgccttctgcctcgagttctttgccgtcttccacaacaaccaccatcaccaccatcaca
tccagcatcagtgaagcctccaccttctcccagagacctctcagcaccggtggttctgga
ttctccagtgtggctcagctccatccccaacctcagcttccacatgcttccttcaccagc
atttctgctccactgcctggctttttccagaaaggggcagtaggaagagacctggctcag
tttgctattccctctgcctctactatcactcctttgatagcccactccattagccctata
ctgacgcaactgcagtccactcaacccaaacctcttcaagttcagtgtagtcaggaggtg
agcaaaccagttaggacaaccactccatcaccttctactggatccccactattctctgca
aatcttttaaagccaactgtcccaaatccccagactcaggatcctcagagtaatgatcat
ctcctacagctctcccatgaaccatctgctctggcttcacttgctcagtatggctctgga
aatgcttccccttctagcaccccaccagcctggagccctacattccagagtcctatggtg
cagaggaagcaggcacccattaatagcaatccctctagtacctcaggatcccaaagttct
ctcctgtcccctcagacgctttgtcctctgccttcccagtcacaagagagggtggggtct
ctggttgatctcccttctcaggacctcagcactatttccttatcgcttccttccccacga
ccctttgagaggcccaaattattacgacaaggcccacatgttccagatcagtcacatctg
gtgtcaatgtctgggttcagccatgcttctttcccaacccctgttaccaaaccctatagt
tcaatacctggccatgtggccctgtcaagacagacttccatagtgttccaaccccagact
ggatcttctggtagtcctgggtctcgagacagttccattccagggacaccaagcttacac
cccaaactcccatcaaacttatga
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