Ictalurus punctatus (channel catfish): 108274760
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Entry
108274760 CDS
T04658
Symbol
nfat5a
Name
(RefSeq) nuclear factor of activated T-cells 5a isoform X1
KO
K17335
nuclear factor of activated T-cells 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108274760 (nfat5a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
108274760 (nfat5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
108274760
NCBI-ProteinID:
XP_017340570
Ensembl:
ENSIPUG00000016725
UniProt:
W5UL01
LinkDB
All DBs
Position
14:18431849..18452149
Genome browser
AA seq
1446 aa
AA seq
DB search
MPSDFIALLNTDIDLSSPRSLYSKESVYDLLPKELQLPLASQDSHSMSQKSGGEAGPLPS
AAVASDAATACVVSSSPGGHSSASSCPSMHCATSAPEQSSRLHCLPVEVLGAEPGSTSGI
SGTAGNDGVGAAAHQSQMTPSKRRTVLNISPPPEDLLDDSRMSCQDEVALNPDSEQSGSI
WMDDSVSNFSMLSSSSYNDNTEVPRKSRKRTPRQRPGSKPVARDESTMDVFDADSAKAPH
FVLSQLGSEGKGSLKGSTLEVAGSQKGGILSTQYPQKSEGKELKILVQPETQHRARYLTE
GSRGSVKDRTQQGFPTVKLEGVNEPVVLQVFVANDAGRVKPHGFYQACRVTGRNTTACKE
VDIDGTTVIEVNLEPSNSMTLAVDCVGILKLRNADVEARIGVAGSKKKSTRARLAFRVNI
PRPDGSVLTLQTLSSPILCTQPAGVPEILKKSLHTCSVTGGEEVFIIGKNFLKGTKVIFQ
ELGTDDSSWQAEAEIDMELFHQNHLVVKVPPYHDLTVTSPVSVRISVLTNAGRTHELQPF
TYTPQPEKVDVPVKSELSVTAKPCTFEEQINAMQTGTNSLNSTLMAPMISIVKREEVTPM
EISTNSTTSNIFKPAEVLNSDQQILEITTILPTSSKSFPSPVSLPSVESQQSVPTMFAPP
EPLTTIQKQDIPPTPSFQVSLSEDTTVLQPVPPQVPQQFLRETPETLSPEDNSPDGTGMV
VVGMESRPPASQQPQVQTILPQDEVAQLERAVRELQEQQQLNSVLYDSNPSPENLQQHVQ
ENMNSLRLGGNENTLTNQQQQQQEHNILHNLQQQHQKALVDLQHQQTVLNNLQQQQKVLV
NFQQQTLGNLQQQQSHQKVLENLQHQKVLGDIQQQNSLVNIQHQKVLDNLQQQQQHQQNL
EKLQQEQQHQEVLEQLQSELLQPQIPMQCTPSFPVPQDQMSEHQSTGQIDGSLSQPSDGF
LQNSSPQPQQQALFQQARGLLTIQTSSFLQQPSSQTSPPQQLFQSHTPITDTQEPQTGLF
GTSKATQVQPTLFPNTVTMLTSTNLSSEQQAPSTTLFISQGVLHSQITSNNSQNQQQQQI
AFLTPMETSTSATQSVSLFQGQPQLSTPMEQHSSQSQQIPTPQQAALFQNITTISQSQGQ
QQPQPGLLFCATSVNPQDLPQTLLFSTQNQGPMGGNSLPQNIFQDQQPMQVVPMAGNITA
DNSTSQSTVSPSQSTQSPQILFPQASVVNVTQQDSTEPMSFQDETSVVGHSSASMPTTQP
GLFQDQQLMQVVPSASNCASVPSADQGTVNIFLPQAAISALQSGVGSQELPQTATGTAIF
SGQSGVTLGGLQSSSAASSQQTPDSLFQTALGGTLNQPGQPGQTGLFIFEIPTECGPLLT
PPGPALTDQLVTMGHPRSDHNQNQLQSSAQIHSLLDQSSSLSEKIDELLEQFEEQGKMLP
RDFLEQ
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgatttcatagcgcttctaaacacggatatcgacctcagttcacccagatct
ctgtattccaaagagtcagtgtatgacctcctgcctaaagaacttcagcttcctctagcc
tcacaggacagccacagcatgagtcagaagagtggtggagaggcaggccctcttccctct
gctgccgtggcctcagatgcagccaccgcctgtgttgtttcatcctcccctggagggcac
agcagtgcttcttcctgtcccagcatgcactgtgctacttcagctccagagcagtcttcc
aggctccactgtctccctgtcgaggtgctgggagcggagcctggttcgacttctggtatc
agtgggactgctgggaacgatggtgtcggagcagcagcccatcagagccagatgacaccc
tcaaagcgacgcactgtactcaacatctctccacctccagaagacctgctggacgacagc
cgcatgtcctgccaggacgaggtagcgctcaacccagactctgagcagagtggcagcata
tggatggacgactctgtttcaaactttagcatgctgagcagcagttcatataacgataac
actgaggttcctcggaaatctcgtaagcgaacaccccgccagaggccaggctcgaagcct
gtggccagggatgaatcaaccatggatgtgtttgacgctgacagcgctaaagctccacac
tttgtactttcacagctcggttctgaaggaaagggcagtctcaaagggagtactctggag
gtggctggcagtcagaaaggtggaattctttcaacacagtatccacaaaagagtgagggg
aaagaattaaagattctggtacagcctgaaacacaacaccgtgcacgataccttacagag
ggcagcagaggatctgtcaaagaccgtacacagcaaggcttccccaccgtcaaactagaa
ggtgtgaatgaaccagttgttctccaagtgtttgtggctaatgatgctgggcgagtaaaa
ccacatggcttctatcaagcatgtagagtgaccggacgtaacacgacggcctgtaaagaa
gtggatattgatgggaccacggttattgaagtgaaccttgagccgagcaactccatgact
ttagcggtggactgtgttgggatattgaaattgaggaatgcagatgttgaagccagaata
ggagtggctggctctaaaaagaaaagtacgagggctcgtttagcattcagggttaacatc
cctagaccagacggctctgtcctcacactgcagaccctttcttcaccaatcctctgtacc
caacctgctggagtgcctgaaattctcaaaaagagtcttcatacctgctcggtgactgga
ggagaggaggtcttcattattggcaagaacttccttaagggaactaaagttatttttcag
gaacttggcacagatgatagctcatggcaggctgaagcagagattgacatggaacttttc
catcaaaatcacctagtggtaaaggtgcctccttatcatgacctgacggtgacctcacct
gtatcagttagaatctctgtgttaacaaatgcaggaagaacacatgagctccagcctttc
acctatactcctcagccagaaaaagttgatgttcctgtgaagtcagagctgtcagtaaca
gccaagccttgcacgtttgaagagcagataaatgcaatgcaaactggcaccaatagtctt
aacagtacattgatggccccaatgatctccatagtcaaaagggaagaagtaaccccaatg
gaaatctctaccaactctacgacgtctaacatttttaagcctgcagaggtccttaattca
gaccaacagattttggaaataaccaccatccttcctactagcagcaaatcctttcctagc
cctgtgtctctgccatctgttgaatctcaacaatcagtgccaacaatgtttgcacctcca
gagccccttacgacaattcagaaacaggatataccccctacaccatcctttcaagtctcc
ttgtcagaagacaccacagttcttcagcctgtgcccccacaggtccctcagcagttcttg
agggaaacccctgagactttgtctccagaagacaacagtccagatggcacaggaatggtg
gtagtggggatggagtctaggcctcccgcttcccagcaaccccaggtccagaccatttta
cctcaagatgaggtagcacagctggaaagagctgttagggagttgcaagaacaacagcaa
ctcaattctgtgctttatgattcaaacccttctcctgaaaacctccagcaacatgtccag
gaaaacatgaacagtttaaggctgggtggcaatgagaacacgttgaccaatcaacagcag
cagcaacaagaacacaatatactgcataatctgcagcaacagcatcagaaagctctagtt
gatctgcagcatcaacaaacagtcttgaacaatctgcaacagcaacaaaaggtcttggtg
aactttcagcaacaaactcttggaaatctgcaacaacaacagtcacatcagaaagttctg
gaaaacctgcagcaccagaaggttcttggggacattcagcaacaaaactctttggtgaat
attcagcatcagaaagtacttgataatctgcaacagcaacagcagcatcagcagaatcta
gagaaacttcaacaagagcaacaacatcaagaggtcttggaacagttgcaatcagaactc
ttacagccacagattcccatgcagtgcacaccgagtttccctgtaccacaggatcaaatg
tctgagcatcaaagcaccggacagatagatggctccttgtcacagccatctgatggtttt
ctccagaattcatccccacagccacagcagcaagcactttttcaacaggccagggggcta
ctgactattcagacatccagctttcttcagcagccatcctcccaaacctcacctccccag
cagctgtttcagagtcatacacctattacagacacacaagaaccacagacagggcttttt
ggtacttcgaaagcgacccaggttcaacctactttatttcccaatacagtgacgatgctg
acaagcactaacttatcttctgagcaacaggctccctcaactaccctgttcatttctcag
ggtgtcctgcatagccaaataacatccaacaattctcaaaatcaacaacagcaacaaatc
gcttttctcactcccatggaaacgtcaacctcagcaacccaatcagtgtcactttttcag
ggacaaccccagttgtccactccaatggaacagcactcttcccagtctcagcaaatacca
acacctcagcaagctgcactattccagaatattactacaatatcccaaagtcagggccag
cagcaaccacagcctggcttactgttctgtgctacttctgttaaccctcaagacctccct
cagactctcctgttcagtacccagaaccagggtccaatgggtggcaactcactgccgcaa
aacatctttcaggaccagcaacccatgcaggttgtcccgatggctggtaatattacagca
gacaactccacaagtcaatctacagtctctccatcacaatcaacacaaagtccacagatt
ctttttccccaagctagtgtggtgaacgtgactcagcaagattcaaccgaaccgatgtct
tttcaagatgagacctctgttgtgggtcactcgtctgccagcatgcctacaacccagcca
ggactctttcaggaccagcagcttatgcaggttgtcccaagtgctagcaactgtgcctct
gtcccttccgcagaccagggcaccgttaatatttttttgccacaggcagccatttcagca
ctccaaagtggtgtgggctctcaagagttacctcagactgctacaggaactgccattttt
agtgggcagagtggagtgacactcggagggttgcagagctcctcggccgcatccagtcaa
cagactccagattcgctttttcagaccgctttagggggaaccctgaaccagcctggacag
ccaggacaaacaggcctatttatttttgaaatccccactgaatgtggtccgttattaacc
cctcctggtcctgcgttgacggaccaacttgtcaccatggggcatcctagatcagatcac
aaccagaatcagcttcagtccagtgcacagattcatagtttactagaccagtccagcagc
ctcagcgagaagattgatgaactactagagcagtttgaggaacaagggaagatgcttcct
agggacttcttagaacagtaa
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integrated database retrieval system
