Ictalurus punctatus (channel catfish): 108274979
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Entry
108274979 CDS
T04658
Name
(RefSeq) F-box only protein 7
KO
K10293
F-box protein 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108274979
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108274979
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
Elongin_A
F-box
PI31_Prot_N
F-box_4
ITAM_Cys-rich
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
108274979
NCBI-ProteinID:
XP_017340953
Ensembl:
ENSIPUG00000015476
UniProt:
A0A2D0SE00
LinkDB
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Position
14:complement(2333890..2346898)
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AA seq
490 aa
AA seq
DB search
MKLRVRVNRRTSRVELEGPDPTLTQLSTRVKEDLLPSHGLSADTEFSLSLNGEEPLTDTG
QTLSSCGVVSGDMISVILPRTDSSASSPSPSSRRTHAVPAVQQNTPESPAALGTHESGAS
SSHQSGESACAPETDETDMERGEDEDEPVGLFIPEPMLCCEAEDGKVPHSLEMLYQAARC
NSASDCLLLAVHVLLLETGFLPQGCDVRAGEMPSGWRVAGGLYRLQYSHPLCENSLAQVA
AVPMGQTLVVNATLKTSSVVESSRKLVLKPDAYVTKERAGGNAGVAYRDLPKLSRVFKDQ
LAYPLIAAAREALGLPALFGLAALPPELLLRIMRLLDVHSLLTLSEVCRHLHSATQDASL
WKHLLHRDFRVYSQADTEHRDTDWKKMYRKRFKQKKELGRYRSRCYFFPVPPIYPPNPLH
IPPLPPLFPPGIIGGEHDQRPPIPQGILPRPRYDPIGPFPGHEPRIGLPFSRRLLRLGGS
RAPDTRRGFI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgagggtgagagtgaacaggcggaccagccgggtggagctggagggacccgat
ccgaccctgacccaactcagcacccgggtcaaggaggacctgctgccttcacacggactc
agcgccgatacagagttcagtctgtctctgaacggggaagagcctctgacggacacagga
cagaccctctcgtcgtgcggcgtggtgtcaggggacatgatcagcgtgatactgcctcgt
accgactcctcggcttcctcgccgtcgccttcctctcgccggacgcatgccgtcccagct
gttcagcagaacacaccggagagtcccgccgcattaggtacacacgagtcaggcgccagc
agcagccaccagagcggagagagtgcatgtgctcctgagacggacgagacggatatggag
agaggtgaggatgaagacgagccggtgggcctcttcatccctgagcccatgctgtgctgc
gaagctgaggatgggaaggtccctcactctctcgaaatgctgtaccaggcggcgcgctgc
aacagcgcctccgactgcctgctgttagcggtacacgtcttactgctggagaccggcttc
ctgccacagggttgtgacgtcagagccggggagatgcccagcggctggcgtgtggcgggg
ggcctttacaggctgcagtactctcacccgctctgtgagaacagcctggctcaggtggct
gctgtgccgatgggccaaacacttgtcgtgaacgccactctgaagacgagcagcgtggta
gagagttcacggaagctggtactgaaaccggacgcgtacgtgactaaggagcgggcaggt
ggaaacgccggagtggcctacagagacttgccgaaactgtctcgtgtttttaaggaccag
ttggcttacccactcattgcagcagctagagaagcactgggtcttcctgcactgtttggt
ctggctgcgctgcccccagagctgctgttaaggataatgcggctgctggacgtgcactct
ctcctaacgctgtccgaagtatgtagacatctgcactccgctacccaggatgcctcactc
tggaaacacctcctgcaccgtgacttcagagtgtacagtcaagccgacactgagcacaga
gatacagactggaaaaagatgtacagaaagcgatttaagcaaaagaaggagctgggaaga
tacagatcgaggtgttacttctttccagttcccccaatttatcctcctaatccattacac
atccctcctctaccgcctctgttcccgcccggcatcatcggaggagagcacgatcagagg
ccccccattccacagggcatcctgccacgcccacgctacgaccccatcggcccgtttcca
ggtcacgaaccacgtatcgggcttcccttcagccgccgcttgctgaggctaggcgggagc
cgagcgccagacaccaggagaggcttcatctga
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