KEGG   Ictalurus punctatus (channel catfish): 108275156
Entry
108275156         CDS       T04658                                 
Symbol
si:dkey-225n22.4
Name
(RefSeq) collagen alpha-1(XXI) chain
  KO
K16629  collagen type XXI alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
SSDB
Motif
Pfam: Collagen VWA VWA_2
Other DBs
NCBI-GeneID: 108275156
NCBI-ProteinID: XP_017341298
UniProt: A0A2D0SF67
LinkDB
Position
1:28943371..29002251
AA seq 933 aa
MLILRLLSMLMLFTCIHSTEKEDIRAGCSTAANDLVYIIDGSWSVGYKDFDTAKRWLVNI
TSGFDVGPHYSQVAVVQFSDTPRLEIPLGAHQTVQELIEAIQAIRYMGGNTQTGRAIKFA
VDHVFASSKRSDTSRNRIAIVVTDGKSQDDVVDASIEARAQGITVFAVGVGSEITTSELI
AIANTPSSYYVLYAQDYTTIDRIRDSMEQKLCEESVCPTRIPVASRDEKGFELILGMKIH
QKAKKIQGSLLSETAYFLDKGVDITEDTKEIFPEGLPPSYVFVATLQLKGTASREKFDLW
RVLSKDQEVQVAVTLHGEENSVIFTTTNMASGEQVVTFDAQGLQTLFDRRWHQLKILVKP
TRVVCFVDDQLIQELDLEPVVPIFINGKTQIAKHYNAHATIPLEIQKLRLYCDPMQSERE
TACEIYSVDDERCPTNREVPEEKEECDCSQGNPGPPGSKGEKGENGLPGHDGKPGIKGER
GTPGQPGKSGQKGEAGLRGTIGDSGVKGSKGERGQQGLPGNQGPPGPKQPQGDKGEQGPP
GEPGPKGEPGLPGSKGPAGTIGPKGDKGDDGQPGTDGTQGVPGIRGLPGEAGPSGPQGAR
GSPGQKGSSGPKGPPGIQGPPGSSGADGQIGPKGSPGQQGSPGRPGVPGEKGSQGEPGFL
GLQGAVGLPGFKGHKGDMGEPGPMGAQGERGSDGTPGVPGPPGEAGLRGSKGERGTPGDP
GYRGPDGKKGDLGHIGVVGPRGFPGQDGSPGHPGLPGYPGKPGKSPSDEHLKKLCGDALR
QELSQLIQTMIPRSCEPCEMVEGPPGPPGAQGPKGSTGPQGYPGRPGSQGYPGSAGFQGP
PGVKGDMGPRGFKGNKGEGRLGQPGPPGERGIQGLHGTDGIGLPGPPGTPGKTGSPGLPG
KRGAPGPAGVCDMSICYAAYNLREEHYSKGPNF
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgttaatattaaggttgctgtcaatgctgatgctctttacatgcatacattccacagaa
aaggaggatattcgagcgggttgcagtacagctgcgaatgatcttgtgtacatcattgat
gggtcctggagtgtgggctacaaggactttgatactgccaagcgctggcttgtcaacatc
accagtggctttgatgtaggcccccattactcccaggtggctgtagtgcagttcagtgac
actcctcggctagagattccgcttggcgctcatcaaactgtccaagagctcattgaagct
atccaggccatccgttacatgggaggaaacacacagacagggcgtgccatcaagtttgca
gttgatcacgtgtttgcttcctcaaagcgcagtgataccagtaggaatcgcattgccata
gtggtgactgatgggaaatctcaggatgatgtggtggatgctagtatagaggctcgagca
cagggaatcactgtatttgcagtgggagtgggctcagagatcaccacctcagagctgatt
gccatcgctaacacaccatccagctactacgtgctgtatgcacaggactacaccaccatc
gatcgcatacgagactcaatggaacaaaagctttgtgaagaatctgtttgtcccacacgt
atccctgtggcctctcgagatgagaagggctttgagctgatactcgggatgaaaattcat
cagaaagccaagaagatacagggctctttgctgtcagaaacagcctacttcctggataaa
ggggtggacattactgaggacacaaaggagatctttccagagggtcttccaccatcctat
gtgtttgtggcaactctgcagcttaaaggcactgcaagcagggaaaagtttgacctgtgg
agggtactttctaaagatcaagaagtccaagtggctgtgacactacatggagaggagaat
tctgtcatctttaccaccaccaacatggcaagtggggaacaggtggtcacttttgatgcg
caaggccttcagacactctttgatcgacgctggcaccagctgaagattctagtcaagcca
acacgtgttgtctgttttgtggatgaccagctaatacaggaactggatttggagccagtt
gtgcccatttttatcaatgggaaaactcagatagccaaacactacaatgcccatgctacg
attcctttggaaatccaaaaactaaggctgtattgtgatccaatgcaaagtgaacgagaa
actgcatgtgagatttattctgtggatgatgagaggtgtcccacaaaccgagaagtgcct
gaagaaaaggaggagtgtgactgcagtcaggggaaccctggaccacctgggtcaaagggt
gaaaaaggagaaaatggacttcctggtcatgatggtaagcctggcatcaaaggtgagaga
ggaacacctggacagccaggtaaatcagggcaaaagggtgaagctggtttacgtggaacc
ataggtgactcaggagtaaagggctccaaaggtgagaggggacagcaagggctgcctgga
aatcaaggaccaccaggtcccaagcaacctcagggtgacaaaggtgaacaagggccccct
ggtgagcctgggccaaagggggaaccgggcctccctggcagtaaaggaccagccggaaca
attggacctaagggtgataagggagatgatggacagcctggcacagatggaacacaaggt
gtaccaggtattcgtggactacctggggaggcagggccaagtggacctcagggggctaga
ggatcacctggacagaaaggatcttctggacctaaaggacctccaggtatccaggggcca
cctgggtcctctggagcagacggacaaattggccctaagggaagtccaggacaacaggga
tcacctggtcgtccgggtgtgccaggcgaaaagggctcacaaggagaaccaggttttcta
ggtttacaaggtgctgttggtcttcctggctttaaaggacataagggggatatgggagaa
cctggtccaatgggtgctcagggtgaaagaggaagcgatggaacacctggtgtgcctggt
ccaccgggtgaagctggactcaggggaagcaaaggagagagaggtactccaggagatcct
ggttatagagggcctgatgggaaaaaaggagacctaggacacataggagtagttggacca
cgtggttttccaggacaggatgggtcaccagggcatcccggtcttccaggatatcctggc
aaacctgggaaatctccttctgatgaacacttaaaaaagctctgtggagatgcattaaga
caggagctctcccagctgatacagacaatgattcctcggagctgtgaaccctgtgagatg
gtggaagggccgccgggtccacctggagctcagggtcctaaaggttccactggaccacag
ggctatccaggcaggccaggctctcagggttacccaggctcagctggcttccagggcccc
ccgggggtcaaaggggacatgggaccaaggggctttaagggcaacaaaggggaaggcagg
ctgggacaacctggaccccctggagaaagagggatccagggtctgcatggcactgatgga
attggattacctggtcctccgggaacaccgggcaaaactggctcaccaggtcttccaggc
aagcgaggtgccccagggccagctggagtatgtgacatgtccatctgctacgcggcctac
aacctcagggaagagcactacagcaaaggcccgaacttctga

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