Ictalurus punctatus (channel catfish): 108276047
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Entry
108276047 CDS
T04658
Symbol
phf20b
Name
(RefSeq) PHD finger protein 20b isoform X1
KO
K18402
PHD finger protein 20
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108276047 (phf20b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108276047 (phf20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
MBT
Tudor_2
PHD
zf-C2H2_aberr
SGF29_Tudor
Agenet
zf-C2H2
Rad9_Rad53_bind
Motif
Other DBs
NCBI-GeneID:
108276047
NCBI-ProteinID:
XP_017342813
Ensembl:
ENSIPUG00000008926
UniProt:
A0A2D0SJD2
LinkDB
All DBs
Position
15:12027182..12052651
Genome browser
AA seq
984 aa
AA seq
DB search
MTKTPPNRRGITFEVGAPLEARDSLKNWYAASIEKIDYEEEKVLIHYRQWSHRYDEWFDW
SSPYLRPVERIQLRRQGLQEHNMAPGFQINQKVLASWSDCRYYPAKILSRDKDDSYTVRF
FDGVVKTVKGIKIKPFRKENTNNKPGQPSRKRAAGKNSKAKENGRNHQDGETESEEEDSK
VTDECSKLQDTTLAEKEPSEMANGHEEQEEKPSVVDVKTEALENGGGESMEMNGGGEEEK
VGTLQNGAHESCGEGQEKDEKEKEASLGQNRRARGKVVEGKDAERASVPELRKRRASTGQ
TPPSKRSRANTTDRNSRSQIRPARSDSVPESFSDKEGLCKTGLLENPKPIVQTASSPDLA
TLLQRQVHLPTTNKYSREPLYRVIKNQPPPILSIELDHNPFKCQVPGCTKSFRKASLLHY
HMKYYHSESELCSSHNTHTSEPQAQDSHTHTSETPRRRRTVSASLDTPSPLSDSKSSHTP
SPHTANGVHRQRSSSHCERSKENQHTNRALHDDRDWVTMETEQEKRREKKPRDFCIKPKK
KKKKKKRSKSDTHGSDKSNGFSSYPCNPNQSIKLPLSHKHRSCAAHFPETELDDGEDSGS
DWSTDSPLWSEEESETGLDLTTPFSEQGVETVGHDSEIVRCVCEVQEENDFMIQCDDCLC
WQHGTCMGLYEDSVPDTYSCYICRDPPAQRQSQRYWYDKDWLSSGHMYGLPFLEENYSHQ
NGKKMAATHQLLGDVHRVFEVLNGLQLKMSILQAQAHPDLKLWRQPWKPSDGMLRKGMGH
SGMTTPSPCSPHAADSTDGEQVNSKQPVPPACSFQTSYISSEHCYQKPHAYYPALEQRLV
VETRSTEELLELETRKLQLTNSKELECRMKLLAAAEREKSCAVQVKEEEPDPVTCDSKPD
PDLLLHQQWQLNLLEHIEAVQDEVSHRMDLIERELDVLESWLDYTGELEPPDPLARLPQL
KHRIRQLLTDLGTVQQIALCSSST
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacgcctcccaacaggcgagggatcacgttcgaggtgggggcaccattggag
gcccgagacagtctgaagaactggtatgctgccagcattgagaagattgactacgaggag
gagaaggtcctgattcactacagacagtggagtcatcgctatgacgagtggttcgactgg
agcagcccttaccttcggcccgtggaacgaatccagctccggagacaaggcctgcaggag
cacaacatggccccgggttttcaaatcaaccagaaagttttagccagctggtcagattgt
cgctactatcctgctaagatcctctcccgtgataaagacgattcttatacagtgaggttt
tttgatggtgtagttaagactgtgaaagggataaagattaaacctttcagaaaggagaac
acgaacaacaagccggggcagccgagccgaaagcgagcagcaggaaagaacagcaaggcc
aaagagaacggtaggaaccatcaggatggtgagaccgaatcggaggaagaagactcaaag
gtgacagacgagtgcagcaagcttcaggacaccacgctggctgagaaggagccgtccgag
atggcgaacggacacgaagagcaagaggaaaagccatccgttgtcgacgtgaagacggaa
gcactggagaacggaggaggggaatcaatggagatgaatggaggaggagaggaggagaaa
gttggaactcttcagaacggtgcccatgaaagctgtggagagggacaagagaaagacgag
aaagagaaagaggccagtcttggccagaacaggagagcaagaggcaaagtagtggaggga
aaagacgcagaacgggccagtgttccagagctgaggaaaagacgtgcatccacgggacaa
actcctccatccaagaggagcagagccaatactacagacagaaacagtcgatcccagatc
agacctgctagatcagattctgttccagaaagcttcagtgataaggagggtctctgcaag
acgggtcttctggagaaccccaagcctattgtacagacagcgtctagtcctgatcttgcc
acgctgctgcaacgacaagtccacctcccaaccaccaataaatacagcagggaaccattg
tacagggtcatcaagaaccagccgccgcccatcctctccattgaactggaccataacccg
tttaagtgccaggtgccaggctgcaccaagtccttccgcaaggcgtctctgttgcactat
cacatgaagtactaccactctgagagcgagctgtgctcttcacacaacacacacacctct
gaacctcaggcccaggatagccacacgcacacgtcggagactccgcgcagacgccgcacc
gtttctgcatctctagacactccatccccgctgagtgacagtaaatccagtcacaccccg
tcaccccatactgccaacggtgtgcatcgtcagcgcagctcctcccactgcgagagaagc
aaagagaaccagcacaccaaccgcgcgctccatgacgacagagactgggtcaccatggaa
acagaacaagagaagaggcgagaaaagaagccgagggacttctgcatcaagccgaagaag
aagaaaaagaagaaaaagaggtccaagtcagacactcatggcagtgataagagcaatggc
tttagctcgtacccctgcaatcccaatcaatcaatcaaattgcccctctcccacaaacac
cgctcctgcgccgcacacttccccgaaacagagcttgatgatggtgaagacagcggcagc
gattggtccacagacagccctctatggagcgaggaggagtcggagacggggctcgatctt
accacgcctttctctgagcagggggtggagacggtgggtcatgactcagagatagtgcgc
tgtgtgtgcgaggtgcaggaggagaacgacttcatgatccagtgtgatgactgtttatgc
tggcagcatggcacgtgcatgggcctgtatgaggacagcgtccctgacacttacagctgc
tacatctgcagggaccctcctgctcaaagacagagtcagcgctactggtatgataaggac
tggctcagcagcggtcacatgtatggcctgcccttcttagaagaaaactactctcaccag
aacggcaagaaaatggcagccactcaccaactcctgggcgacgtgcaccgtgtgttcgaa
gtgctgaacggcctccagctcaaaatgagcatactgcaggctcaggctcacccagacctg
aaactgtggcggcagccctggaagccatctgacggcatgctcaggaaggggatggggcat
tctggcatgaccacgccctctccctgctcccctcacgcagcggactccacagatggtgag
caggtcaattccaagcaacccgtgcctcctgcctgctccttccagacgtcttacatcagc
agcgagcactgctaccaaaagccacatgcatattatccagcactggagcagcggctggtg
gtggagacacgcagcaccgaggagcttctggagctcgagacgcgcaaactgcaactgacc
aattctaaggagttggagtgtcgcatgaagctgctagcggcggccgaaagagagaagagc
tgtgcagtccaggttaaggaagaggagcctgacccagtgacctgtgattctaaacctgac
cctgaccttctgctacaccagcagtggcagctgaacctgctggaacacatcgaggccgtg
caagacgaggtcagccacaggatggacctcatagagagagagctggatgttttagaaagt
tggctagactacacgggtgagctggagcctccagaccctctggcacgtctcccacagctc
aaacaccgcatcagacagctactgacagacctgggaacagtgcagcagatcgcattgtgc
tcctcatccacatga
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