Ictalurus punctatus (channel catfish): 108276259
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Entry
108276259 CDS
T04658
Symbol
nr1d4a
Name
(RefSeq) nuclear receptor subfamily 1, group D, member 4a
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276259 (nr1d4a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108276259 (nr1d4a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108276259 (nr1d4a)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1D. Rev-Erb
108276259 (nr1d4a)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108276259
NCBI-ProteinID:
XP_017343262
Ensembl:
ENSIPUG00000022322
UniProt:
A0A2D0SKN2
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Position
15:complement(4485392..4502130)
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AA seq
573 aa
AA seq
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MDSNPGSVILYAGSSGSASPSPGSPSSGYQTQSPSTHSQPSSPEEVTFTEIGALKQHGSS
GTPSSPKLVFQFPEIYTSSTASSNQNTYSHPIAGKRPCGFTGTFTKAGGMVLLCKVCGDI
ASGFHYGVHACEGCKGFFRRSIQQNINYKMCMKNENCLIMRMNRNRCQHCRFKKCLAVGM
SRDAVRFGRIPKREKQRLLDEMQSYMNSLNESASSNMASSPPCDPPASPMEIQPKETIGS
MAKAYQDIFPSAPERLTKRAAGINTGSSVPTSFQSATSQESSFSHVNSPATYHSGVPVGY
TVSGLCPGQQMPNENKCPISSVDNGHYQNHAPSNQIPCQSTVNPSPQANYGNSYAAGEMQ
AQTSGPWKLVAGSKVLACPLNACPVSAPGVSSQQVWESFSQCFTPAVREVVEFAKGIPGF
QDLCQHDQIMLLKAGTFQVLMVRFCSLFNPKERTVTFLNGQAYPLATLRTLGMGSLLDAM
FDFSEKLASLSLESDEMALFMAVVLVSADRTGVSDTAAVEQLQESLIRALRALVYRRHPD
DSALFPKLLLRLPDLRTLNTLHSDKLLNFHIDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaccctggaagtgttatcctatatgctggctccagtggcagtgccagccca
agcccaggaagcccgtccagtgggtaccagacccagtcaccctccacacactcacagcca
tcatccccagaggaggtcaccttcacagagattggcgctctgaaacaacatggcagcagt
gggaccccctcctctcccaaactggtttttcagttcccagagatctacaccagctcaaca
gcatcctccaaccagaatacttactcccatcccattgcaggaaagaggccatgtggtttt
actggcaccttcaccaaagcaggaggtatggtcctactctgtaaagtgtgtggtgacatc
gcatcaggcttccattatggagttcatgcatgtgagggctgcaagggattctttcgccgc
agcattcagcagaacattaactacaagatgtgcatgaagaacgagaactgcttgatcatg
cgcatgaaccgcaaccgttgccagcactgccgcttcaagaagtgtttggccgtgggcatg
tcccgtgatgctgtacgcttcggccgcatccctaaacgcgagaagcagaggctgctggat
gaaatgcagagctacatgaacagcctgaatgagtcagccagctcgaacatggcctcctcc
cctccttgtgaccccccagccagccctatggagatccagcccaaagaaactattggctcc
atggcaaaagcctatcaggacatcttcccaagtgctcccgaacgcctgacaaagagggca
gctggcatcaacaccggcagcagtgtgccaacttcctttcagagcgccacctctcaggaa
agcagcttctcccatgtcaatagtcctgcaacatatcactccggtgtacctgtgggttac
acagtatctggtctctgccctggacagcaaatgcccaatgaaaacaaatgcccaatatcc
tcagtggataacggtcactatcaaaaccatgctccatccaatcaaatcccgtgccagtct
acagttaacccatctccgcaggccaattacggcaatagctatgcagctggggagatgcag
gctcagacctcaggcccatggaagctggtcgcaggctccaaagtactggcctgccctctg
aatgcatgcccagtttcagcgccaggcgtctcaagccagcaggtgtgggagtctttctct
cagtgtttcacccctgcagtgcgggaggtggtggagtttgccaagggcatcccagggttt
caagacctgtgccaacatgaccagatcatgttgctcaaagcgggcacctttcaggtgctg
atggtaaggttctgttcgctgtttaacccaaaggagcggacggtgacatttctaaatggg
caggcctacccgctggccacactgcggacattgggtatgggctcgctgctggatgccatg
tttgacttctctgagaaattggcctcgctcagcctggaatctgatgagatggcacttttc
atggcagtggtcctagtctctgcagatcgaactggtgtttctgacacagcagctgtggag
cagttacaggagagtctgatacgggcgctgcgagccttggtttaccgtcgtcatcctgat
gacagtgcacttttccccaagctgttgctgcgtcttccagacttgcgcaccctcaacacc
ctgcactcagacaagctgctcaacttccacattgacccataa
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