Ictalurus punctatus (channel catfish): 108276331
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Entry
108276331 CDS
T04658
Name
(RefSeq) peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108276331
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108276331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276331
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108276331
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108276331
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
108276331
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108276331
NCBI-ProteinID:
XP_017343406
Ensembl:
ENSIPUG00000017984
UniProt:
A0A2D0SLM7
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Position
15:26859827..26868573
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AA seq
467 aa
AA seq
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MCTDGEKFDAWNMSFGLDQLGLDEMTIYGFDVTFPSKPEFSLSASSEDSELANDTDTQRL
HSEEESSRCSGLKTPPHTEHSFSYAKLHDDASTALLNMACKICGDRASGYHYGVHACEGC
KGFFRRTVGLKLKYKHCSRNCRVHKKSRNKCQFCRFKKCVLAGMSHTAIRFGRTPLAERE
KLIMEFHTVVHRLEPESGKQQAIARNLYRSYLRHFPITKSKAKAILSGKDTENPLFIIHD
MKSLMAGEGFLVWKHSSVPALFPVAELELSMFRRVQYGSAECVRRVAEFAKSIPGFGELE
LSDQITMLKYSAFEVNIICLSHFTNKDGVLMAEGRVFMTREFIKSLRKPFCDMMETKFDF
LDKFRALELEECDLVLFITAVILCGDRPGLVNPKAIEALQDEVLQTLEFQLKVLHPESPH
LFAKLLQKMTDLRSLVAEHVRNIHLLKKSELDMCLHPLLLEIMQDLY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacggatggagagaagtttgacgcctggaacatgagttttggactcgatcagctc
ggactggacgaaatgacaatatacggtttcgacgtgacatttccatcaaaacccgagttc
tccttgagcgcttccagtgaggattctgaactcgccaatgacacggacactcagcgtctc
cacagtgaggaggaaagttctaggtgctcaggtttgaagactccgcctcatacagaacac
agcttctcgtacgccaagctgcacgacgacgccagcaccgcgttactaaacatggcgtgt
aagatatgtggagatcgagcctcggggtatcactacggcgtccacgcttgtgaagggtgt
aagggcttctttcggagaaccgtgggattgaagctgaagtataaacactgcagccggaac
tgtcgagtccacaaaaaaagccggaacaagtgtcagttctgccggtttaagaagtgtgtt
ttggcaggaatgtctcacacagccattcgttttgggagaacgcctctagccgagcgagag
aagctgatcatggagttccacacagtcgtgcatcggctggaaccggagtcaggaaaacaa
caagcgatcgccaggaatttataccgttcctacctcagacacttcccaataacgaagagc
aaagccaaagccattttatcaggaaaagacacagaaaacccgctgttcatcatccacgat
atgaagtctctgatggctggtgaggggttcctggtgtggaagcactcgtctgtgccggct
ctgttccccgtcgccgagctggagttgtccatgttccgccgtgtgcagtacggctcggcc
gagtgcgtgcgcagagtcgcagagtttgcgaagagcatcccgggtttcggggagctggag
ctgagcgatcagatcaccatgctgaagtacagcgccttcgaggtgaacatcatctgcctg
agtcacttcaccaacaaggacggcgtgctgatggccgagggacgagtcttcatgacccga
gagttcatcaagagcctccgcaaaccgttctgcgacatgatggagaccaagtttgacttc
ttggataaatttagagcactcgagctggaggagtgcgacctggtgctcttcatcaccgca
gtcatcctgtgtggagatcggccgggtttggtgaacccaaaagccatcgaggcgctccag
gatgaggttcttcagactctggagttccagctgaaggttctccaccccgagtctccgcac
ctcttcgccaaactgctgcagaagatgacggacctgcggtcgctggttgctgaacatgta
cgcaacatccacctactgaagaagagcgagctggacatgtgtcttcacccgctcttactg
gagatcatgcaggacctctactag
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