Ictalurus punctatus (channel catfish): 108276640
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Entry
108276640 CDS
T04658
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108276640
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108276640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108276640
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108276640
BRITE hierarchy
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
108276640
NCBI-ProteinID:
XP_017343941
Ensembl:
ENSIPUG00000024907
UniProt:
A0A2D0SN67
LinkDB
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Position
16:complement(19851966..19868652)
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AA seq
1128 aa
AA seq
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MPALGIWDTLGRLVLLPLLAPGVLVLILTPACLLAHPQPCQILKRIGHTVRVGAVHLQPR
AVTHSSLGRKGIEWDWDADRETTWEQLELVRKSVSEQGARDVRTKGSNQQKGAKSKSVHK
QVASAFLPRDSIFLAAETLNRLPNLLPYNLSLEIVMAVEVGLGELPAFSFSSSPPPSVCS
DPMSFLQSVCHTVVVQGVSAIMAFPENRDEFIKLEFVSSSLHIPVISVVQNQFRRQSRNS
LHFQMAMQNPQTPQVDLIYSLLSINNWYDVSLLMCQELNISQFIFLLRNNSKFHLGSIVN
ISTNSSSKSDFQTALQSHMTSIKDITSTIVTFGCDIRDIKRIFITIAKLGLVLPDYHWII
GDSQNVEELRTEGLPMGLMAHGRMRQPALDHYVQDSLEFIARAVGSAATVSPELALIPGI
TNCMVIEDKNLTSGSYLSRFMANTSFDGLSGSIHVQDESTIISKSHHFIWNLQHDPLGSP
AWTRLGSWKQGKVVLDYGVWPSKKRSHPGGDWRHSSRLHLRVVTLVEHPFVFTREVDDDG
QCPAGQLCLDPLTNDTALLDALFHGLQSGNSTVPTKLKKCCYGYCIDLLEKLAEDVGFNF
DLYIVGDGKYGAYKNGRWTGLVGDLLSGAAQLAVTSFSINSARSQVIDFTSPFFSTSLGI
LVRTRDTAAPIGAFMWPLHWSMWLGIFASLHVTAVFLTLYEWKSPFGMTPKGRNRDRVFS
FSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYE
QLSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNVPTTPDGIDHLKDD
PQKLDAFIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQYK
SDGFMDMLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCIGVALSLLTTIAEHVV
HRWVIPKMQNKPQYWLHTSQRLHRALNPTLNEDKLSTVAKPEKRCNIGNNQQNLWNVCEN
SVCPRCRLSNQEEQQNNLECLQCKELLPPPPPPPPPPPVSPPPPQLKRQLPLQSNGKTDL
LGLAHSPIVQELTDLETHIQIIKQQLQLAMKKKKELEQYQKTNMAPES
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctggggatttgggatacgctgggaaggttggtgctgcttccgttgctcgcg
ccgggcgtgttggtgctcattttgacgcccgcgtgcctcctcgcgcacccgcagccatgt
cagatcctgaaacggatcgggcacacggtgcgagtgggagctgtgcatcttcagccccgc
gccgtgacgcacagctccctcgggaggaaaggaatcgagtgggattgggacgcggacaga
gaaacgacctgggaacagctcgagttagtcaggaaaagtgtaagtgaacaaggtgcgagg
gatgttaggactaaaggctcgaaccagcaaaaaggcgcgaaaagtaaatccgtgcacaaa
caagtcgcgagcgcgtttctacccagagactccatcttcctggccgcggagactctgaac
cgattaccgaacctgttaccatacaacctgtcactggagatcgtcatggctgtggaggta
ggactcggcgagctaccggctttctccttctcctcttcacctcctccatctgtgtgttcc
gaccccatgtcgttcctgcagagtgtgtgtcacacggtcgtggttcaaggcgtttcagcc
atcatggcgtttcctgagaacagagacgagttcatcaagttggagttcgtgtcctcctcg
ctgcacattccagtcatcagcgtcgttcagaaccagttcaggcgtcagagtcggaactcg
ctccatttccagatggccatgcagaatccccagactcctcaggtggacttaatctattct
cttctttccattaataattggtacgatgtgagcctgctgatgtgccaggagcttaatatt
tcccagttcatcttcctgcttcgcaacaactcaaaatttcacctgggctccatagtcaac
atttccactaacagcagcagcaaaagtgactttcagacagccctgcagagtcacatgacc
tccattaaggacataacatccaccattgtgacttttggatgtgatattcgggacataaag
aggatctttataaccatagcaaagcttggtttagtgctgccagactaccactggattata
ggggactcgcagaacgtggaggagttaaggaccgaggggctgccgatgggccttatggcg
catgggcgaatgaggcagcctgctctggatcactacgttcaggactctttggagtttatt
gccagggccgttggatcagctgccactgtgtctccagagctggcgcttatccctggcatc
acaaactgcatggtgattgaggataaaaatctcacctcaggaagctatctgtccaggttc
atggccaacacatcatttgatgggctaagtggctccattcatgttcaggatgaatctacc
attatctccaaaagccatcacttcatttggaatctgcagcatgatccattagggagccct
gcatggacacgacttggtagctggaagcagggaaaagtggtactggactatggagtttgg
cctagcaagaaacgttcacacccaggtggcgattggaggcattcctccagattgcacctg
cgggtagtaacgctggtagagcacccctttgtattcacgcgagaggtggatgatgatggt
cagtgcccagcagggcagctgtgccttgacccactcaccaatgacacagcacttcttgat
gccctcttccatggcctgcagtctggcaacagcacagttcccaccaagctcaagaagtgc
tgctatggctattgcatagacctgctggagaaactagctgaggatgtgggttttaacttt
gacctctatattgtgggagatggaaagtatggtgcctacaagaacggccgctggacaggc
ttggtgggagacctgctgagtggtgcagcacagttggctgtcacttcatttagcatcaac
tcagctcgcagtcaggttatcgacttcaccagccctttcttctccaccagcctgggcatc
ctagtgaggacaagagacacggcagcgcccattggtgccttcatgtggcccttacactgg
agcatgtggctgggcatcttcgcatctctccacgttactgctgtattccttaccctgtat
gagtggaagagtccatttgggatgacgcccaaaggccgaaacagggaccgtgtattctcc
ttctcttcagcactcaatgtttgctatgccatcttgttcggtaggacagctgccatcaag
ccacccaagtgctggacaggccgctttctaatgaatctctgggccatattctgtctgttt
tgtctctcaacatacacagccaatctggctgccgtgatggttggggaaaagacgtatgag
cagctttcaggtatacacgaccccaagctccatcatccatcgcagggtttccgatttggg
accgtacgggagagcagtgctgaggattatgtgaaaaaaagctttccagagatgcatgaa
tacatgaggcgatataatgttcctacaacccctgatggaatagaccaccttaaggatgat
cctcaaaaactagatgcttttattatggacaaagccctcttagactatgaagtgtccatt
gatgctgattgtaaaactctcacagtggggaaaccatttgcaattgaaggctatggcatt
ggtctcaaacagaattcgcctctgacttcaaatatctctgagctggttagccagtacaag
tcagatggatttatggacatgctgcatgataagtggtacaaagtggtgccctgtgggaaa
agaagttttgctgtgacagagactttacagatggggattaaacatttctcagggttattt
gtaatgctgtgcataggagtcgctttgtctctcctcacaactattgctgaacacgttgtc
catcgctgggtgatacccaagatgcagaacaagccacagtactggcttcatacgagtcaa
agattgcatcgagcacttaacccgaccctcaatgaagacaaattatcaactgttgcgaaa
ccggaaaaaaggtgcaacattgggaacaaccagcaaaatctctggaacgtctgtgaaaac
tcagtctgcccacgttgtcgcctttccaaccaagaggaacagcagaacaatttggaatgt
ttacagtgtaaagagctcctcccccctcctcctcctcctcctccgcctcctcctgtttct
cctcctcctcctcagctgaagagacagcttcctctacagtcgaatgggaaaacagacctg
ctgggcctggcacacagcccaatagtgcaggagctgactgacctggagactcacattcag
atcatcaaacagcagctccagctggccatgaagaaaaaaaaggagctggaacagtaccag
aaaaccaacatggcacccgagtcctag
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