Ictalurus punctatus (channel catfish): 108277158
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Entry
108277158 CDS
T04658
Name
(RefSeq) roundabout homolog 2
KO
K06754
roundabout, axon guidance receptor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277158
04515 Cell adhesion molecules [BR:
ipu04515
]
108277158
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108277158
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
ROBO family
108277158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_C17orf99
Ig_6
Pur_ac_phosph_N
Sp38
Motif
Other DBs
NCBI-GeneID:
108277158
NCBI-ProteinID:
XP_053542626
Ensembl:
ENSIPUG00000002204
UniProt:
A0A9F7TRF8
LinkDB
All DBs
Position
16:complement(18000158..18158122)
Genome browser
AA seq
1394 aa
AA seq
DB search
MKLLRFIILCGFLNTQINGSRIRQEDYPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTV
EWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYMGEAVSH
NASLEVAFLRDDFRQNPQDVVIAVGESATLECQAPRGHPEPTTFWRKDKARLDLKDERIT
IRGGKLTISNTRKSDGGMYVCVAANMVGERESEMAQLSVFERPTFVRRPVNQVALVDESV
EFRCQVQGDPPPSLRWRKDEAEIPRTRYEMKYEKDDFVLRIKKVSSGDQGSFTCVAENRV
GKVEASATLTVREAPQFVVRPRDQIVMQGRTATFPCEAKGNPQPAVFWQREGNKDLLFPN
QPAQAGSRFSVAQNGDLSITSVQRSDAGYYICQALTVAGSILAKAQLEVSDALKDRPPPI
IQHGPTNQTVAVGSLAVLGCRASGEPEPTVTWLKDGASLLAKEPRMSLLEAGSLQIQNVK
LSDSGLYTCLASSSSGETSWSAFLDVRESAELTDSVSHNVTALPGPPSKPEVTDVTKSTV
SLSWRPGSEDASLMSAYVIEAFGQLVSNSWQTVADHVKDTQYTVRELRPNTVYVFIIRAV
NTQGVGDPSAMSEPVRTQDISPAMQGVDHRQVQKELGDVIVTMHNPIVLSSTSVRVTWAV
EKPSQFIQGYRVLYRQTSGLPSPGAWQIQDLKAPLERDVTLHELKKGVVYEIKVRPFFNE
FQGADSESITARTLEEAPSAPPQQVTVLMVGSENSTSISISWDPPPTEHQNGIIQEYKIW
CLGNESRFHVNKTVDAAIRSVVVGGLQAGVQYRVEVAAGTSAGVGVKSEPQPIVIGAELQ
DVMTGDEGGGSITDVLKQPAFIAGLGGACWIVLMGFSAWLYWRRKKRKGLSNYAVQSFTF
TRAVTFQHGDRGLMGSGSRPGLLKAGDPGLPWLADSWPSTSLPANSGLGASKDLTNFGRG
DVLPAGAGEKTGTMLSDGAIYSSIDFAGKAGYSSPGRGNHASPYATTQILQSNSFHELAV
DRPEPRWKASLRTQHEMPSLGYSLTENRSCANGGKNGKKKKSKGGGKTAKPNGSCWANLP
LPPPPMNPLPGTEMDHYAPDHRSEGGYESDTWAPPLPVQSYLHQGMEDELEEEERVPTPP
LRGVASSPAALPYGQSSSGSLGSSHHEEMQSMLQAHLDELTRAYQYEVAKQSWHLKSSSH
PPKTPAPPMGYVSSTLGSDILTEGEDEEGDSEGYELSRQLCGIDYSPGRSLETVEGAITG
HPYSHRTQASSAGSIDGGLLATQSLGHQRVSQPSQKLRVETPGTEPHRRDDIADVRAPSS
EPLHSIGARLHTSWGSVGSDPPDECVVSTLEQQHAANWSSRGTLGCVSQRRSSTDQRDSA
GRASGCMEANYGHL
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctgcggttcattattttgtgcggatttctgaacactcaaatcaatggatct
cgtatccgtcaggaggactaccccccgcggattgtggagcacccatcagacctgatcgtg
tcgaagggtgagccggccacgctgaactgtaaggccgagggccgtccagcacccactgtc
gagtggtataaagatggtgagcgtgtggagacagacagggacaacccacgttcgcaccgt
atgctccttcccagcggctcactcttcttcctgcgcatcgtgcacggtcgccgcagcaaa
cctgacgacggcagctacgtgtgtgtggccagaaactacatgggagaggcggtcagccac
aacgcttcactggaagtggcattcctgcgtgatgatttccggcagaaccctcaggatgtg
gtgatagcagtaggagaatcggctacgttggagtgtcaggctcctcggggccacccggaa
cccactaccttctggaggaaggataaagctcgactcgacctcaaagacgaaaggattact
attcgaggtgggaagttgaccatctccaacacccgaaagagcgatggggggatgtacgtg
tgtgtcgcagccaacatggtgggggagagggagagcgagatggctcaactgtctgtgttt
gagcggcccacgttcgtgcgcaggcccgtaaaccaggtggcgctagtggacgagagcgta
gagttcagatgccaggtgcagggagatccccctccgtcactacgctggaggaaggacgag
gccgagattccccgcaccaggtacgagatgaaatacgaaaaggacgactttgtcttgagg
attaagaaagtgtcttctggggaccagggaagcttcacgtgtgttgcggagaaccgggtg
ggcaaagtggaagcgtcggctacgctcacagtcagggaggcaccccagtttgttgtgcgg
ccccgcgaccagattgtgatgcagggacgcactgctactttcccgtgtgaggccaaggga
aacccgcagcccgccgtgttctggcagagagaggggaacaaggacctgctttttccaaat
caacctgctcaggcaggaagtcgcttctcagtggctcagaatggagatctgagcatcact
tcagtacaacgctcagacgcaggctactacatctgccaggctctcacagtggctggcagc
atactggccaaggcccagctggaggtgtctgatgctcttaaagaccgcccaccacccatt
attcagcacgggccaacaaatcagacagtggcagtgggcagcctggcggttctggggtgt
agggcgtctggagagcctgaacccacggtcacttggctgaaggacggagcgagtctgctg
gctaaagagcctcgaatgtccttgctggaggcaggcagtctgcagatccagaacgttaag
ctctcagactcaggtctgtacacctgcttggcctccagctcaagtggagagacctcatgg
agcgccttcttagacgtcagagagtctgccgagctcacggactccgtatcccacaacgtc
actgctctcccggggcccccttccaagccggaggtcactgatgtcaccaagagcactgtg
tctctgtcatggcgtcctggatccgaggatgcttccctcatgtctgcctatgtcatagag
gcctttggccagctggtgagtaacagctggcagactgtagccgatcacgtgaaggacacg
cagtacacagtcagagagctccgaccgaacaccgtctacgtcttcatcatcagagcagtg
aacacgcagggggtgggagacccgagtgccatgtccgagcctgtccgcacccaggacatc
agtccagctatgcagggtgtcgatcaccgtcaagtccagaaggagctgggtgatgtcatt
gtcactatgcacaaccccatagtgctcagctccacctctgtgcgggtgacatgggcggtt
gagaaaccttcccagttcatccaaggataccgtgttctgtacaggcaaacttcaggcctt
ccttctccaggagcctggcagatccaggacctaaaggctccactggagcgtgatgtcact
ttacatgaactcaaaaagggcgtggtctatgagataaaggttcgccctttcttcaacgag
ttccagggggcagacagcgaatccatcaccgcacgcactttggaagaagcccccagtgct
cctccacagcaggtgacggtgctgatggtaggcagtgagaacagcacatctatcagcatt
tcctgggacccgccacccaccgaacaccagaacggcatcatccaggaatacaagatctgg
tgtctgggaaacgaaagccgcttccatgtgaacaagacggtggacgctgctattcgctcg
gtggtggtcgggggtctgcaggcaggcgtgcagtacagggtggaggtggcagcgggtacc
agcgcaggcgtcggggtgaagagcgagccacagcctattgtgatcggtgccgagttacag
gatgtgatgaccggagacgagggcggcggaagcatcaccgatgtcttgaagcagccggca
ttcatcgcagggcttgggggcgcgtgctggatcgttctcatgggcttcagcgcttggctc
tactggaggaggaagaagaggaaaggcctgagcaactacgcagtccagtcgttcaccttc
acccgtgcagtgacgttccaacatggagacagaggcctgatgggaagtggaagtcgtcct
ggtctgctgaaagccggtgaccctggcctcccttggctagctgactcctggccgtccacc
agcctgcctgccaacagtggtctgggcgcttccaaagacctcactaactttggtcgtgga
gacgtgttgcctgctggtgccggtgaaaagacgggcaccatgctgtcggatggtgctatc
tacagtagcatcgacttcgccggcaaggcgggctacagtagcccaggcagaggaaaccat
gccagcccctatgccaccacacagatcctgcagtccaacagcttccacgagctggcagtg
gatcgtcccgagccgcgctggaaggcctcgctgcgaacacagcatgaaatgcccagcctg
ggctactcactcacggaaaaccgttcctgtgccaacgggggaaagaacgggaaaaagaag
aaatcgaaaggaggggggaaaacagcaaagcctaatggctcctgctgggccaacttgccc
cttcctccaccacccatgaatcctttaccagggacagagatggaccactatgcccctgat
catcgatctgagggagggtatgaaagcgacacctgggctccgcctctccctgttcagtca
tacctacaccagggcatggaggacgagctcgaggaggaagaacgagtacccactccaccc
ctgaggggcgtggcttcatctccagcagctttgccctatggccagagttcctctggctca
ttggggtcctcgcatcatgaggaaatgcagtctatgctccaggcccatctggacgagctt
acccgtgcctaccagtatgaggtggccaagcaaagctggcatctgaaaagcagctcccat
ccgcccaagacccctgcccctcccatgggctatgtgtccagtacattaggatcagacatc
ctgactgaaggagaggatgaagagggagacagtgaaggctatgagttgtcccgacagctg
tgtggaatagactattcccctggacgcagcctggaaacggtggaaggagcgatcacagga
cacccttactctcaccgaacccaggcaagcagcgctggctccatagacggaggacttcta
gcaactcagagcctgggtcatcaacgggtatcacagccttcacaaaaactacgagtagag
acaccagggactgaacctcacaggagggatgacattgctgatgtgcgagcgccctcctca
gagcccctacacagcattggtgcacggctacacacttcctggggttctgtgggctcagat
cctcctgatgagtgtgtagtgtctacactggagcaacagcacgcagccaactggagctcc
agaggcacgctgggatgcgtctcacagagacggtccagcacagatcagcgggactctgca
ggacgagcgtcaggctgcatggaggccaactacggacatctatag
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integrated database retrieval system
