Ictalurus punctatus (channel catfish): 108277239
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Entry
108277239 CDS
T04658
Name
(RefSeq) BRCA2-interacting transcriptional repressor EMSY
KO
K25790
BRCA2-interacting transcriptional repressor EMSY
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277239
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108277239
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
108277239
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108277239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ENT
Motif
Other DBs
NCBI-GeneID:
108277239
NCBI-ProteinID:
XP_017345282
Ensembl:
ENSIPUG00000008712
UniProt:
A0A2D0SRE9
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All DBs
Position
16:12157044..12181467
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AA seq
1222 aa
AA seq
DB search
MIQQEKPQPPSTMPVVWPTLLDLSRDDCKRILRKLELEAYAGVISALRAQGDLTKDKKDL
LGELTKVLSISTERHRAEVRRAVNDERLTTIAYHMSGPNSSSEWSIEGRRLVPLMPRLVP
QTAFTVTANAVASATAHQNSSLLLPAETGNKEVVVCYSYTSTTATPPSVSAPSISAAAAV
KSPRPTSPASNVVVLPSGSTVYVKSVSCSDEDEKPRKRRRTNSSGSSPVLLKEVPKATTP
ASKSITVPVSGSPKMSNLMQSIANSLPPHMSPVKITFTKPSTQATNSTTQKVIIVTTSAS
SSFVPNILSKSHNYAAVSKLVSSSAVTSSCQKQTMVISAGSTTAPSPVAVTTVVSSTPTV
VMSTVAQTGSTAAVKVATARMPSPKALVGSPSQILQFPKQQQQPQQSISPKGLSASPLSS
SPQTTSTVSASKPTIQIKQESGVKIITQQMQPSKILPKPSNAAMPSSSSGPIMVVSSNGA
IMTTKLVSTPTGTQATYTRPTVTPSIGARMATTPAGTTYVKTTSGSIITVVPKSLATLGG
KIISTNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGGEKAL
QAVPGAKPAIITASRPITKMIVTQPKSLGSAVQPSTTTKLIPTKIVYGQQGKTQVLIKPK
PMAFQATVVSEQARQLVSETLQQVTRGTEAGVIPGSSQEGALKDDSPSYMASSPTSSDNT
HDTQSVVHVISSRGQDWTEQEVSVEASPTIIFQDMSGEAQSATSTIKALLELQQTTAKEK
AEAKPRQHTIDLSQMAVPIQMPTERRQSPEPSGQAAGEPETPAEATGKAGKVAAGGEVST
SCSQSSALSSTVKSSSTAPSTSTSSITVQAGAGKPLEEQAVVEEGELEGDTLDPQTGLFY
RSVNPSAPAPAPPPPPPPLQQHRIPTHTINKPLVLSISTPTKSTLCQTEASKISPSARPP
APAATTRADKPSASPAPSLSAPSGSGAQHTPPTKAVHTPQLPRLQQAPSSHNRPKTHTQL
SQPPPLQAHHPVASDKASSSSSSSQVQQPIITQGAAVTKITFGAPPVSSSSGEAAVKLQA
ESSSEKPNVSDILKISMMEAEIEPGTEAVVVDSSSDCSTFSKAASTSPLISSSKHTHSHT
HATFGRIQKSKESDIIQVIPQYSIMPDSSQSNVVVEPSGFLEITDYTSQRLDDEATLDQE
VDSSNDEGAAPSPMETCADQSQ
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgattcagcaggagaagccccagccgccttccaccatgccggtggtgtggcctacgctt
ctcgacctcagccgagatgactgtaaacgaattctgcgcaagcttgagctggaggcatat
gccggagtgatcagtgcgcttcgtgcccagggtgatctcaccaaggacaagaaagacctg
cttggagaacttaccaaagtattaagcatctcaactgagcgccatcgtgcagaggtgcgg
cgtgcagtgaatgacgagcgtctcactaccatcgcataccacatgtctgggcctaacagc
tcctcagagtggtctattgaagggcgtaggctggtccccctgatgcccaggctggtgcct
cagacggcatttacagtgacggccaatgcggtagccagtgccacagcacatcagaattct
tctctgctccttcctgcagagactggcaacaaagaagtggtagtgtgttactcatatacc
agcactacagccacaccccctagtgtctccgcccccagcatcagtgcagcagctgcagtc
aagtcgcctcggcctacaagtcccgcctccaatgtggtagtgctgcccagcgggagcact
gtgtatgtgaagagcgtaagttgctctgatgaggatgaaaagcctcgtaaacgccggcgt
accaactcctcaggctcttcacctgttctactaaaggaggtgcctaaagcgaccacaccc
gcctcaaagagcatcactgtgccggtgagcggcagcccaaagatgagcaacctcatgcag
agcatcgcaaattcgctaccgccacacatgtctccagtaaaaatcaccttcaccaagcca
agcacacaggccactaactccaccacccagaaggtcattattgttacgacctctgcaagc
tccagctttgttcccaatatcctctccaagtctcataactatgcagctgtgtcgaaactg
gtgtccagctctgcagtcacatcatcttgtcagaagcagaccatggtgatttcagctggc
agcaccactgcccctagccctgtcgccgtgacaactgtggtgtcctccactcctacggtg
gtcatgtccactgtggcccaaactggctccacagcagcagtgaaggtggccacagcgaga
atgccttcccccaaagctctggtgggttctccctctcagatcctccagttccccaagcaa
cagcagcagccgcaacagtcaatttcacccaaaggcctttctgcgtctcctctctcttcc
tcacctcaaaccaccagtacagtgtcggcctccaaaccgaccatacagatcaaacaagag
tcaggtgtaaagatcatcacccagcagatgcagcctagtaagattttgccgaagccctcg
aatgcagccatgccgagtagcagctctggtcccatcatggtggtgagcagcaatggcgcc
atcatgaccacaaaactggtctccacccctacagggacccaggctacgtacacccggccc
acagtaactccatccatcggagctcgaatggccacgacacctgctgggactacatacgtc
aaaaccaccagcggcagcattataacagtggttcccaagtctcttgctacactgggcggg
aagatcatcagcaccaacatagtgtccggcaccaccacaaagatcaccaccattcccatg
acctccaaacctaatgtcatcgtggtgcagaaaaccactgggaaaggaaccaccattcag
ggcttacccgggaagaatgtggtcaccacactgttaaatgctgggggggagaaagctctg
caggctgtgccgggagcaaagcctgccatcatcacggcatctcggcccatcactaagatg
attgtaacgcagccaaagagtctcggttcagctgtgcagccgtctaccaccaccaagctc
atccccaccaagattgtttatggccagcagggcaagacccaggtgctgataaagccgaaa
ccaatggcgttccaggcaacagtagtgagtgaacaggcaaggcagctggtgagcgagaca
ctgcagcaggtgactcgtggtactgaggcaggtgtaataccaggctctagccaggagggg
gcactcaaggatgactctccatcgtacatggcgagcagcccaacatcctcagacaatact
catgacacccagtcagtcgtgcatgtcatcagctccaggggccaggattggacagaacaa
gaagtctctgtggaagcgagtcccaccatcattttccaggacatgagtggagaggctcag
tctgctacgtctaccattaaagccctgctggagctgcagcagacaacagcgaaggaaaag
gcagaggccaagcctcggcagcacaccatcgatctgagtcagatggctgtgccaatacag
atgcccacagagaggaggcagtcacctgaaccctcaggccaggctgcaggcgagcctgag
accccagcagaggccactggtaaagcagggaaggttgcagcaggaggtgaagtgtctaca
tcctgcagtcagtcatcagctctctcttccacagtgaaaagctccagcacggctccatcc
accagcaccagttcaatcactgttcaggcaggtgctggcaagcccctggaggagcaggcc
gtagtggaggagggagaattggaaggtgacacattggaccctcaaactggactgttctac
agatcagtaaatccctctgccccggccccagccccaccccctcctcctccccctctacag
cagcaccgcatccccacacacaccattaacaagcccctggtactttccatatccacacct
accaagtcaactctctgccagactgaggcctccaaaatcagtcccagtgccagacctcca
gctccagcagcgactacacgggcagataaaccctccgcctctcctgctccctctctttcg
gctccctctggatctggagcccagcacactccccccactaaagctgtccatactccacag
ctgccccgactacagcaggcaccaagctcacataaccgaccaaaaacacacacacagctc
tcccagcccccaccactgcaggcccaccatcccgtggcctcagataaagcatccagtagc
agcagcagcagccaggtgcagcagccaatcataacacaaggagcagcagtcactaaaatc
acttttggggctcctcccgtgtccagcagcagcggtgaagctgcagtgaagctgcaggcc
gagtccagctcggagaagcccaacgtctctgacatcctgaagatctccatgatggaggcg
gagatcgaaccaggcacagaggccgtggtggtggactcatccagtgactgcagtaccttc
agcaaagctgcctctacgtctccgctcatcagcagctccaaacacacacactcgcacaca
catgccacctttggacgcatccagaagagcaaagaatcggacattatacaggtgattcct
cagtactccatcatgcctgactcgagccagtcaaacgttgtggtggagccaagcggcttt
ctggagatcacagactacaccagccagcggctagacgatgaggccactctggaccaggaa
gtggatagcagtaatgatgagggtgcagcgcctagccccatggagacctgtgctgaccaa
tcacaataa
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integrated database retrieval system
