Ictalurus punctatus (channel catfish): 108277693 Help Entry 108277693         CDS       T04658                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108277693 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108277693 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108277693 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ipu04147]     108277693 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:ipu00536]     108277693 (col4a4) Exosome [BR:ipu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108277693 (col4a4) Glycosaminoglycan binding proteins [BR:ipu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108277693 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108277693 NCBI-ProteinID:  XP_017346002 Ensembl:  ENSIPUG00000001529 UniProt:  A0A2D0STI6 LinkDB All DBs Position 17:3744407..3799371 Genome browser AA seq 1663 aa AA seqDB search MTRPHRIASLSLPLWWLLLTRVYRQEAQGVEISQDCGQRNTSLCPCIPIKGSRGPPGALG EDGRMGAPGPQGPQGQRGQKGQRGSEGIPGVPGIKGDVGTPGIPGVPGIKGDVGPRGHVG PPGLPGLDGCEGTRGDPGPAGRPGPNGVIGPRGHPGPKGPKGVSACRYLRVPGQPGCNGP PGDPGPRGLPGPCGPQGPQGNPGDPGLPGGNGAPGVRGVPGDTGKLIPGDSGDEGDPGPK GDPGPTELVEPPQELFPKGDKGSKGPDGPRGLPGYKGNDGSVGETGEKGVAGWPGPTGES GYPGHSGRQGIQGEQGMPGLCGESGSPGLKGISGDPGPRGQTTYFFYEAGCVGERGSPGA PGVKGDMGLIGLPGPTGQTGISIPGTPGWPGMVGPQGLQGEKGAPGKRSTEQIPGEPGKP GLQGPKGIQGDPGPTGYSCIPGQRGVPGITGDKGPSGSKGNEGKQGDSGDCVCAVRILNG VKGFPGEPGEPGAPGLQGLPGARGETGPDGEPGLIGHFGYPGFPGFRGLKGEKGNLFVMN VKGQKGLAGTPGTEGNPGTNGRCGDHGNPGPPGDCGPEGESFTGLPGDRGCPGNMGFKGA RGPCGPQGSGIPGSVGHRGHEGDQGPPGQRGNVGRKGNKGDMQVCIPGSPGVRGPKGELG DQGCLGEEGNPGPCGDQGINGPKGEKGNLGNPGPNGPAGLCGSQGDPGDCGPVGKSLHGE PGIPGNTGPTGLQGCIGDSLVGERGPVGPSGLTGSLGPKGVPGAPGSLGREGSPGVPGAR GSKGEPGANGQPGKEGSAGPCAVQCPVGTLGNPGLPGDPGCNGNPGERGEKGCTGPPGIP GRGLKGDTGRPGPPGARGYCGPQGCQGSEGQSGDPGPNGLKGHPGQPGWDGLSGGPGECG CQGPPGVKGEKGFDGRQGCTGVNGEEGEKGSHGNPGMPGEINVNAEKGKKGESGMPGQCG LPGLRGDKGEKGEHGPDGFSGYLGLPGSENGPRGPQGLFGRPGGPGRQGLPGLKGNSGFT GECGDPGDPGLSGSPGVPGFSGFDGLKGDRGDSIGTPGPPGLRGPSGQNGFPGSPGDEGD EGEEGLPGQCGQHGKPGAVGNRGHCGPQGVIGPAGPRGKCGAEGPSGPPGPPGPPGPSGH NGPKGCQGPPGLHGLDGLEGVNGEPGARGLGVPGDRGPDGLTGEKGCSGDPGPHGPIQQG VKGYHGPPGLPGNPGCPGPQGLPGSDCGNPKGGQSGETGFMGGDGPSGPRGPMGPAGLAI PVLGDEGDPGTHGPPGCKGQIGDRGPNGQVGVSGLHGQKGEQGDPGLIGDPGPSGLPGEN GSPGLRGTKGPQGDQGSPGHVGNIIHRDFSRPIPGPPGLPGPAGESGFPGLTGIQGSGGL KGTKGLVGDQGLDGEPGPPGHIGLPGDPGPEGARGSPGRQGQQGPPGDEGPPGPSESFSA GFLLVIHSQSTAVPVCPQDMLKLWEGYSLLYLEGQEKAHSQDLGQVGSCMRVFSTMPFSL CNQHACNYANRNDKSYWLATTAPLPTRPVSGLDIQPHISRCVVCEAPSPAIAIHSQERLI PTCPPNWRSLWIGYSFLMHTGSGDEGGGQSLTSPGSCLQDFFTHPFVECQGPQGTCHYFA NLYNFWLMSFNGEQPDEQPELMTLKEASQQRDYVSRCSVCLRV NT seq 4992 nt NT seq  +upstreamnt  +downstreamnt atgacacgcccccaccggattgcctcgctcagcctcccactctggtggcttttactgaca cgtgtgtacagacaggaagctcaaggggttgagatctcccaggactgtggccagcgcaac accagcttgtgcccctgtattccaataaaaggttccaggggacctcctggtgctttaggg gaagatggtcgaatgggggctccaggtccacaaggccctcagggacaacgtggacagaaa ggacaacggggatcggaaggaattcctggggttcctggaataaaaggagatgtaggcact ccaggaattcctggggttcctggaataaaaggagatgtaggtcctcgtggacatgttggc cctcccggtcttccaggattagatggctgcgaaggaaccagaggagatccaggacccgct ggccgtccaggaccaaatggtgtaatcggaccacgaggacacccaggaccaaagggaccg aaaggagttagtgcatgcagatatttgagggttcctggtcaacctggttgcaatggacct cctggtgatcctggacctcgaggacttcctggaccttgtggcccacagggtccacagggg aaccctggagatcctggattaccgggtggaaatggtgctccaggtgtacgaggtgttcca ggagacacgggaaaactgattcctggtgatagtggagatgagggagatccagggccaaag ggtgatccagggcccactgaattggttgagccaccacaagaattgttccccaaaggagac aaggggtcaaaaggacctgacggaccccgtggattgcctggatataagggaaatgacgga tctgtgggggaaacgggagagaaaggtgtcgcaggttggccaggacctacaggagaatct ggctatcctgggcattctggcagacaaggaattcagggtgaacaaggaatgcctggactc tgtggtgaaagtggctccccaggactgaagggaatctcgggtgatcctggaccaagaggg caaacaacatatttcttttatgaagcaggttgtgttggtgaacgaggatctcctggggcc cctggtgtcaaaggagacatgggattgataggtctgccaggccctactggtcaaacagga atatctataccaggaaccccaggctggccagggatggttggtcctcaaggccttcaaggt gaaaaaggagcgccaggaaagagaagcactgagcagatcccaggggaacctgggaaacca gggctccaagggccaaaagggattcaaggggatcccggacccactggatactcctgcatc cctggccaaagaggagttcctggaatcacaggagataaaggtccatctggttctaaaggc aatgaagggaaacaaggtgacagtggtgactgtgtttgtgcggtcagaattttaaacggc gttaagggtttcccgggtgaacctggcgaacccggtgctccaggactgcaggggcttcct ggtgcacgaggtgaaactggccctgatggagaacctgggctgataggacattttggttat ccgggttttccaggtttcagggggctaaaaggagaaaaaggaaacctgtttgtgatgaat gtcaagggtcaaaagggactggccggcacaccagggactgagggcaatccgggaaccaat ggcaggtgtggggatcatgggaatcctggtcctccaggagattgtggtccagagggtgaa agttttacaggtcttcctggtgatcgaggttgtccaggaaatatgggtttcaaaggtgca agaggtccctgtggaccacaaggctcaggcattcctgggtcagtaggtcatcgaggacat gaaggtgaccagggacctccaggacagagaggaaatgttgggcgtaaaggaaacaaaggt gatatgcaagtctgtatacctggcagtcctggagtccgtggaccaaagggagagcttggt gaccaaggctgcttaggagaggagggcaatccagggccttgtggggatcagggaataaat ggaccaaagggagagaaaggaaaccttggaaatcctggtcctaatggccctgcagggtta tgtggatctcagggggatccaggagactgtggacctgtcggaaagagtttgcatggggaa ccagggatacccggcaatactgggcccactgggttacaaggatgcattggagactcattg gtaggagagcgagggccagtgggccctagtgggctcactggctctttaggacctaaagga gtccctggagccccagggtcacttggtagagaaggctctcctggtgtacctggagctcga ggtagtaaaggagagccaggagcaaatggtcagcctgggaaagaggggtctgcaggccca tgtgcagtacagtgtccagttggaacactggggaacccaggacttccaggagacccaggc tgtaatggaaatccaggcgaacgtggtgagaagggatgtaccggaccacctggcattcct ggaagggggctgaaaggtgatactgggagaccaggcccacctggtgctcggggatactgt ggtcctcagggatgtcaaggatcagaaggacagtctggagatcctggtccaaatggattg aaaggtcatcctggacaacccgggtgggacggcttatctggtggccctggtgagtgtgga tgtcaaggaccacctggcgtgaaaggcgagaaaggctttgacgggagacaaggttgtact ggcgtaaatggagaggaaggagagaaaggttcccatggaaatcctgggatgccaggagag attaacgtgaatgctgaaaaggggaagaagggggagtcaggaatgcctgggcagtgtgga ctccctggtctccgaggcgataaaggtgagaagggtgaacacggcccagatggcttttca gggtatcttggacttccaggttctgagaacggccctcgaggaccacaaggtctttttgga aggccaggtggacctggacgccagggcttaccagggttaaaaggcaatagcggatttact ggagaatgtggagatccaggtgacccagggttgagtggatctccaggagtcccaggtttc tctggatttgatgggctgaaaggtgatagaggagattccataggtacaccaggacctcca ggtctgagaggtccatctggacaaaatggcttcccaggttctcctggagatgagggagat gagggagaggagggtctgcctggtcagtgtggacagcatggcaaacctggtgctgttgga aatcgaggacactgtggaccccaaggtgttattggtcctgcgggacccagaggaaaatgt ggtgccgaaggtccttcagggcctcctggacctcctggacctcctggaccatcaggccac aatggcccaaaaggttgtcaagggccaccgggactgcatggactggatggattagagggt gtgaatggtgaaccaggggcacgcggactaggtgtacctggggatagggggcctgatggt ctgacaggtgaaaagggttgttcaggagaccctgggccacatggtcctatccagcaaggg gtcaaaggctatcacggcccacctggattgccaggtaatcctggttgtcctggtcctcaa ggtcttcctggctcggactgtgggaaccctaaaggaggacagagtggtgaaacaggtttt atgggtggcgacggcccatcaggacctagggggcccatgggaccggcaggcctggcaata cctgtgctgggggatgagggggacccaggtacacatggtcctcctggatgtaaaggacaa ataggtgatcgtggtcccaatggccaggtcggggtttcaggcctccatggacagaaaggt gagcaaggagacccagggcttattggagatcctggaccttctggcttaccaggagaaaat ggcagccccgggctcaggggcactaaaggaccacaaggagaccaaggttctcctggacat gtagggaatattattcatagggatttcagcaggccgattccaggtccacctggacttcct ggacctgctggtgaatctggctttccaggacttacaggaattcagggaagtggaggtcta aaaggtacaaaaggcctagtgggagatcaagggttggatggtgaacccggaccacctggc catatcggacttcctggagaccctggaccggagggtgccagaggttcaccaggcaggcaa ggccaacaaggacctccaggagatgaaggtcctcccggcccttctgagagtttcagcgca ggcttcctattggtcatccacagccaatcaacagctgtacctgtttgtcctcaagatatg ttaaagttgtgggagggatacagcctactgtaccttgaggggcaagagaaagcacactcg caagacctgggtcaggtagggtcgtgtatgcgtgtcttcagcactatgcccttttcactc tgcaaccagcatgcctgcaactatgccaaccgcaatgacaaatcctattggcttgccacc actgctccattacccacaaggcccgtgtctgggctggacatccagccacacatcagcagg tgtgtggtgtgtgaggctccatcaccggccattgccattcacagccaggaaagactcata cccacgtgtccgccgaattggaggagcctctggattggatattctttccttatgcacacc gggtcaggagatgaaggaggcggccagtctctcacatcgccaggaagctgcctacaggat ttcttcacacatccattcgtggaatgccagggcccacaagggacatgccactatttcgcc aacctctacaacttttggctcatgagtttcaatggcgagcaaccagatgagcaaccagaa ctgatgaccttaaaagaagcgagccagcagcgtgattacgttagccgatgcagtgtctgc ctgagggtgtga

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