Ictalurus punctatus (channel catfish): 108277794
Help
Entry
108277794 CDS
T04658
Symbol
scn4ba
Name
(RefSeq) sodium channel, voltage-gated, type IV, beta a isoform X1
KO
K04848
voltage-gated sodium channel type IV beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108277794 (scn4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108277794 (scn4ba)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108277794 (scn4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
108277794
NCBI-ProteinID:
XP_017346207
Ensembl:
ENSIPUG00000018195
UniProt:
W5UAU4
LinkDB
All DBs
Position
17:4541970..4564382
Genome browser
AA seq
244 aa
AA seq
DB search
MDKRVHGKVDMEVWRTRGSILHRSTRSGDGIHASIVITLLIGVWCAQALEVSVGKAGFVE
VMNGSSVLLPCSYSSCIGIKNLYFNWKYNNDNGTMDMLCEGVIPAEGLEPHVTIAHERVM
FVGSSKDSNISVLLWNVTFEDKGEYTCFARNPKEKNRNHSAVFNLIVVDQLKEVDNTLTL
IIVSVIGGVIGLIIIVMVIKAVVIHFLNKNQEKNKECLVSSSGNDNTENGLSGSKADNKA
SPKA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgtgtgcatggaaaagtggacatggaggtgtggaggactagaggatcaatc
ctgcacagaagcacaagatctggtgatggcatccatgctagcatagtcatcacccttctg
attggggtatggtgtgcacaggcattggaagtgtcagtggggaaggctggctttgttgag
gtgatgaatggcagctctgtactcttaccttgtagctacagtagctgtatcggcatcaag
aacctgtacttcaactggaagtataataatgacaatgggacaatggatatgctttgtgag
ggagtcatcccagctgagggtttggagccccatgtgacgatcgcccatgagcgtgtgatg
ttcgtgggctccagtaaggacagtaacatttctgtcctgctgtggaacgtcaccttcgag
gataagggcgagtacacttgcttcgcccgcaaccccaaagagaagaaccgaaaccacagt
gccgtattcaacctcatcgtagttgaccagcttaaggaagtggacaacacgttgacgcta
atcattgtatccgtgattggaggagttattgggttgatcattatagtcatggtaataaag
gcagtggtcatccattttctcaacaagaaccaggagaaaaataaagagtgccttgtgagc
tcttcaggaaatgacaacacagaaaatggcctttcaggttccaaagcagacaacaaagca
tcaccaaaggcttaa
DBGET
integrated database retrieval system
