Ictalurus punctatus (channel catfish): 108278110
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Entry
108278110 CDS
T04658
Symbol
sap130b
Name
(RefSeq) histone deacetylase complex subunit SAP130b isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108278110 (sap130b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108278110 (sap130b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
108278110
NCBI-ProteinID:
XP_017346773
Ensembl:
ENSIPUG00000018357
UniProt:
A0A2D0SVR5
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All DBs
Position
17:20019317..20035992
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AA seq
995 aa
AA seq
DB search
MSSQQYQRAGLNPAHTPGLQTKQTTTGHEDGGRDSGIVSSSSAAGPIRDDKQEPVVVRPY
GAMPSALSSLPQHLPVTFTEGPGKSVLKTPIPSRVIAPAPTQGHLALPHKVPGHITVTVE
SAVPPVSAIPVATISGQQGHTGNLHRIMATNLQIIRSGAPALQIGSPATPQHQFPSHLPR
GAAAAAVMSSSKGATVLRPASGPNPAAGQPTVQHIIHQPIQSRPIVTTSTAVLPTVVAPV
SATRPQSPVISTVTAHSGELVHGRSAITIHPPPAALSIQRAPHARDTPTRITLPSHPAIG
AQKPLPHSMAQKPIFSTMTPVAAATVAPILATNTVPSTATTGSVTQSQVSSSNIVTVTMA
SHSTHATTVTTSTIPVAKVVPQPITHTSSRIQSEFSGERGNLIPISAHRASPNPAAAMEN
RSDTRQSVPMQFQYFLPTYQSAPYPLPHTYTPITSSVSTIRPYPVNAQSPSAAQPSMGVA
SAVHLNSMQLMTVDRIAQINTQNMQPAAVAAQGGQNAAISAQGLHTNAPIAPQSIQAAPI
NPQQNPSEAKTSVVLADASALVANSINGTFNANQPVTTVTQAHSQGGGSGTPTLVSSPRP
SILRKKPAIDGTAVRKNLMAAQLGDSARMDGGLRNAAGSPRPAGVKPKPDILMGLAPPVS
AAVDAVSGQSGEQNVAPPPSQIPAQPVSALLASVTPPSQPVPAAMAVTPPIPSMANVVAP
PSHPAASSTAACAISSALPEIKQEVSPIDTSKPVAPPPPSGTPALSAPPADLTPGASPRK
KPRKQQHVISTEESEMMETNSTDEEKPPAKPVSHRPEKRKSPPKEYIDEEGVRYVPVRIR
PPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGSLQDVANQKGVVCRAQGWKIHLCAAQ
LVQLTNLEHDVYSRLTTLQEGLVPKKKGAADDDLHRISELVQGNMQRCKLVMDQITEARE
AMMKVLDHRERVLKLLNKNSSTKKLHKLHKRKDRA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacagcagtatcagcgagcaggactgaaccctgcacacacaccggggctccaa
accaagcagaccactacaggtcatgaggatggtggacgtgactcgggtatcgtgtcttcc
tccagcgcagcaggacccatcagagacgataagcaggaaccggtggtggtgcgaccgtac
ggagcgatgccctctgccctttcgtcgctgcctcagcacctccctgtcaccttcaccgaa
ggacctggcaagtctgtcctgaagactcctattcctagccgtgtaatcgccccagccccg
actcaagggcatctcgccctgccacacaaagtacctgggcacatcacggtcaccgtagag
agcgccgtgccgccggtgtccgcgatcccagtcgccaccatcagcgggcagcagggtcac
actggaaacctgcaccgcatcatggccaccaatctgcagattatccgtagcggggctccg
gcgctgcagatcggatccccggcaacgccgcagcatcagtttccctcgcatttacccaga
ggagctgcggccgctgcggtcatgtccagttcaaaaggagcgacggtgttgaggccggcg
tcaggaccgaatcccgcagcaggacagccgacggtgcagcacatcatccatcagcccatt
cagtcacgtccgatagtcaccacgtccacggcggtcttgcccacagtggtggctccggtc
tcggccaccaggccccagtctcctgttatcagcacggtgacggctcactcaggagagcta
gttcacggacgctcagctattaccatacaccctcctcctgctgccctgagtatccagcgg
gctcctcacgctcgggacacacccacacgcatcacacttccatcccacccagctatcggt
gctcagaagcccctcccacactccatggcacagaaaccaatcttcagcaccatgacgcct
gtcgctgcggcaaccgtggcccccatactggccaccaacacagttccatcgaccgcaact
acaggctccgtgacccagtcccaggtgtccagcagtaacatagttacagtgaccatggcc
tctcattccactcacgccactacagtgaccacctccaccatccccgtggcgaaggtggtg
ccccagcccatcacacatacctcttctcgaatccagtctgagttcagtggagaaagaggg
aacctcatccccatctctgcccaccgcgcttcccctaatcctgctgctgcaatggagaac
cgcagtgacaccagacagtctgttcctatgcagtttcagtacttcctgccaacctaccaa
tcagctccttaccctctgccacacacctacacacccatcaccagctcggtgtccaccata
cgcccctatccagtgaatgctcagtctccctctgccgctcagcccagcatgggcgttgcc
tccgccgtccatctgaactccatgcagctgatgacggtggaccgcatcgctcagatcaac
acgcagaacatgcagcctgcggctgtggcagcacaaggaggtcaaaacgctgccatctct
gctcaaggacttcacaccaacgccccgatcgcaccgcagagcatccaggccgctcccatc
aacccccaacaaaacccaagtgaggccaagacttcagtggtgctggccgacgcctcggct
ctggtcgccaactccatcaacggcacctttaatgccaatcagcccgtcaccacagtaact
caggcacactcgcagggaggcggatcggggacgccgacgctagtctcgtcgcctcgaccc
agcattctccgcaaaaaacctgccattgatggcactgctgtgaggaaaaatctgatggca
gctcagctcggagactctgccaggatggacggaggtctgaggaacgctgcaggatcacca
cgacccgctggagtaaaacccaaaccagacatcctcatgggtttggctcctcctgtcagc
gctgcagtggacgccgtctccggacaaagcggtgagcagaatgtagctccgcctccttct
caaatcccagcccagcccgtctccgccctcctggcttcagtcacgcctccttctcagcct
gtccctgctgccatggcggtgactccgcccatcccatcgatggccaacgtggtggcgccg
ccttctcacccggcagccagtagtaccgcggcctgtgccattagctccgcccttccagaa
attaagcaggaggtgtcacccatagacacctcaaaaccagtggctccaccgccacctagt
ggcactcctgccctttcagcgcctcctgcggatctcacgcccggagcttcgcccaggaaa
aagccccgcaagcagcagcacgtcatctccactgaggagagcgagatgatggagaccaac
agcacagacgaggagaaacctcctgctaaaccggtcagccaccgacccgagaaacgcaaa
tcgcctcctaaagagtacatcgacgaggagggtgtgcgatatgttcccgtccgaatccgt
cctccggtcactcttctgcgtcattaccgtaacccctggaaagctgcttatcatcacttc
cagagatacagcgatgtccgggtcaaagaggagaagaaaggcagcctgcaggatgtggcc
aatcagaagggggttgtgtgtcgagctcaaggctggaagatccatctgtgtgccgctcag
ctggtgcagctgacgaacctggagcacgacgtctacagccgtttaacgactctgcaggag
ggcctcgtccccaagaaaaaaggcgcagcagacgacgatctgcaccgcatcagtgagctt
gtgcagggtaacatgcagcgctgtaagctagtgatggatcagatcacggaggctcgcgag
gccatgatgaaggtgctggaccacagagaacgagtcctcaaactcctcaacaagaacagc
agcaccaagaagctccacaagctccacaaacgcaaagaccgagcatga
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