Ictalurus punctatus (channel catfish): 108278468
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Entry
108278468 CDS
T04658
Symbol
cd248b
Name
(RefSeq) endosialin
KO
K06706
CD248 antigen, endosialin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108278468 (cd248b)
04091 Lectins [BR:
ipu04091
]
108278468 (cd248b)
CD molecules [BR:
ipu04090
]
Proteins
108278468 (cd248b)
Lectins [BR:
ipu04091
]
C-Type lectins
Group 14: Thrombomodulin
108278468 (cd248b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
EGF_CA
cEGF
EGF
Lectin_C
hEGF
Tme5_EGF_like
EGF_3
Plasmod_Pvs28
Chordopox_A33R
Motif
Other DBs
NCBI-GeneID:
108278468
NCBI-ProteinID:
XP_017347354
Ensembl:
ENSIPUG00000020741
UniProt:
W5U884
LinkDB
All DBs
Position
18:complement(12576399..12579262)
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AA seq
695 aa
AA seq
DB search
MPVKQRMDAEAEVEQSLRKMCCAAYIFLFLTVLLICLPQGILGQNLQEQDGLCNAEGCYS
VHVQRKTFRESWRSCKDRGGNLAVVKRPEEAALIQDLLKAGERQGPRPRLRLWIGLQRQP
RQCSAIRPLRGFTWITGDQDTEYTNWQREELPGACTAPRCVVITYNTTDKSKSDQNNFKW
LDGSCMIAVDGFLCHYTYRGMCLPLQSEGNGPARYTTPFNLLSTLLSHIPYGSVATLPCP
DIAKEDQSVLCMLHEDGRVGWSKDAPLCSDAPKDWCEQDNGGCEHYCVNADSHYYCECSE
DFKIGDNGQSCQPLDPCHGADCEFDCEPSPGGYRCKCPEGYLLSQNGLNCIDIDECQQHP
CPHVCINAPGTFECRCNEGYQLSEFGECLDVNECNEGKCEHSCENSPGSYICLCHEGFSP
VPDDPERCEDIDECQLTGTCEHICDNYEGGFECSCEAGYELQQDEYSCLPTKDMVEQYPT
AEPVHPTTLVWDESGNTPDIVTDNIPLEWLTEPSSIDWLPTGLDWFTDIAQEYYVTSPEP
GWTEQTPNSPTSDWLKDATTSNIPADSNAKDEKKQWLDESRILSQGEDHLPSTLPPNRNG
DADRITPLTHQILEGSLPSASSQEQNPGGKKKQDRSWLLVALLVPLCVFMVVMLALGIVY
CTSCAVEPRNKNVTDCYSWTTNSKPAETKAAKSQA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccagttaaacaaaggatggatgcagaggcagaggtagaacagtctctgagaaagatg
tgctgtgctgcatacatttttcttttccttacagtgctattgatttgcctgcctcaggga
attttgggtcagaacttgcaggaacaggatggtttgtgcaacgctgaaggatgctactca
gttcacgtccaacgcaagactttccgggagtcctggagaagttgcaaggatagagggggc
aatctggctgtggtgaagcgaccagaggaagcagcattgatccaggatctgctgaaggct
ggggagcgtcaaggtcctcgccccaggctcaggctctggatcggtctccagagacagcct
cgacagtgctcagccatacgtcctctgaggggtttcacctggatcacaggagatcaagac
acggagtacactaactggcaacgtgaggaattaccaggtgcatgtactgcccctcgttgt
gtggtcattacctacaatactacagacaagagtaaaagtgaccaaaacaactttaagtgg
ctggatggctcatgcatgattgctgtggatggtttcttgtgtcactacacataccgaggg
atgtgtctacctctgcagagtgaaggaaacggacctgcacgctacaccacccctttcaac
ctgctcagtaccctgctctcccatatcccctacggatctgtggccactctaccttgtcca
gacatcgccaaagaagatcagtcagtgctctgtatgctacatgaggatggaagagttgga
tggtccaaggatgcacctctttgttccgatgctccaaaggactggtgtgagcaagacaat
ggaggttgtgagcactactgtgtgaatgcagattctcactattactgtgagtgttcagag
gatttcaagataggtgacaatgggcaaagctgccagcccttggatccatgtcatggtgct
gactgtgagtttgactgtgagcccagtcctgggggataccgctgcaagtgtccagagggg
tacctcctctcacagaatggtctaaattgcattgatattgatgagtgccaacaacatcca
tgcccccacgtctgcatcaatgcaccaggaacgtttgagtgccgctgcaatgagggctat
cagctgtctgagtttggtgagtgcttagatgtaaatgaatgcaatgaaggcaaatgtgag
cactcctgtgagaactccccaggaagctatatatgtctctgtcatgaaggattctcccct
gtacctgatgatccagagcggtgtgaagatatcgatgagtgtcaactcactggcacttgt
gagcatatatgtgacaattatgaaggtggatttgagtgtagctgtgaagcaggctatgag
ttgcagcaggatgagtattcatgtttgcctaccaaagacatggttgagcaatacccaact
gctgaaccggttcatccaacaacacttgtttgggatgaatctggtaacacacctgacata
gtgactgataatattcctctggagtggcttactgaaccttcaagcatagactggcttccc
acagggttagactggtttacagacatagcacaagagtactatgttacctcgccagaacct
ggctggacagagcaaacccccaattccccaacatcagattggttaaaggatgctacgaca
tcaaatataccagctgattcaaatgctaaggatgaaaaaaaacagtggttggatgagagc
agaatattatcacaaggtgaagaccacttaccttcaactcttccaccaaacaggaatggg
gatgctgataggatcactcctttgacacatcaaatccttgagggtagtttgccatccgcc
tccagccaagagcagaatccaggtggcaaaaagaagcaagacagaagctggttgctagta
gcactactagttcctctctgtgtctttatggtagtcatgctagcattgggcattgtgtac
tgtacaagctgtgctgttgagccacgcaacaaaaatgtgacagactgttacagctggacc
accaactccaaacctgctgaaacaaaagctgcaaaatcacaggcctga
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