Ictalurus punctatus (channel catfish): 108278484
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Entry
108278484 CDS
T04658
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278484
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
108278484
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
108278484
NCBI-ProteinID:
XP_017347379
Ensembl:
ENSIPUG00000016616
UniProt:
A0A2D0SXG7
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Position
18:complement(7842423..7952795)
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AA seq
888 aa
AA seq
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MEDKTSSRDERADAGNSVQRRDSAKKSVGGGGGGGVGGGGGGGGASPSASKEHSNSVSAS
ADRDREEAAVGLCDENESRQQYGFMQRQIGAMLQPGVNKFSLRMFGSQKAVEKEQERVQT
AGYWIIHPYSDFRFYWDLIMLIMMMGNLIIIPVGITFFSEQTTTTWLVFNVASDTIFLVD
LVMNFRTGIVNEESSEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYK
TARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLC
HWDGCLQFLVPLLQDFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSM
SDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQ
KIHDYYEHRYQGKIFDEDNILNELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLS
KLKFEVFQPNDYIIREGTVGKKMYFIQHGVASVITKHNKEMKLTDGSYFGEICLLTKGRR
TASVRADTYCRLFSLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSLLLQKFQKDL
NAGVFNTQENELLKQIIRQDREMVMMVERKQSVTGANSTPMSGNSIINSPAQPPFANSQF
QQQPQSSPMTPMAPMSYSTSASIIPAARLAGSVAFSSPGNPATPLQQQPTPGGVMSPCSF
TAGRTFQYGSPTASQLSLLPQLSAVMTQQQQQQQSSQPQQASPQRNEVHSSLSRDVRHLS
ASQPSLPHETSLAIRQHPSSGESLASIQPAASPSPQAPGSAPQQGGIRATVPPRVALFRQ
MSSGALPPVRAAPSTVQHRDPMGSRRESAVLNSGPETEQDKMRFASNL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagacgagctcgagggacgagagagcggacgcggggaattcggtgcagagg
cgagactcggcgaagaaaagcgttggaggaggaggaggaggaggtgttggtggcggagga
ggtggaggtggtgcgagtcccagtgcatccaaagagcacagcaactcggtgagcgcgagc
gcggatcgggaccgggaggaggctgcggtggggctgtgcgacgagaacgagagccgacag
cagtacggcttcatgcagcggcagatcggcgcgatgctgcagcccggagtgaacaagttc
tcgctgcgcatgttcggcagccagaaagccgtggagaaggagcaggagcgcgtgcagacc
gccgggtactggatcatccacccgtacagcgacttcaggttctactgggacttgatcatg
ctcatcatgatgatggggaacctaatcatcattcctgtaggaataacgttcttttccgag
cagaccacgaccacctggctggtgttcaacgtggcctcggacaccatcttcctggtggac
ctggtcatgaacttccgcacgggaatcgtcaacgaggagagctcagagatcatcctggac
cccaaggtgattaagatgaactacctgaagagctggttcgtggtggattttctctcctcc
attcccgtggattatatctttctgatcgtggagaagggcttcgactcggaggtgtacaag
acggcgcgggcgctgcgcatcgtccgcttcaccaagatcctcagcctgctgcgactgctc
cgcctctcacgcctcatcagatacatccaccaatgggaagagattttccacatgacgtac
gacctggcaagcgcagtggtaagaatatttaacctgattgggatgatgctcttgctgtgt
cactgggatggatgtctgcagttcctggtccctctgctccaggactttcctccggattgc
tgggtgtcactaaacggtatggttaacgactcctggggaaagcagtactcatacgctctc
ttcaaggccatgagtcatatgctgtgtatcggttacggagcccgagcgccggtcagcatg
tccgatctgtggatcacgatgctcagcatgattgtgggagcgacgtgttacgccatgttc
gtgggccatgctacggcactcatccagtcgctcgactcctcgcgcagacagtaccaggag
aagtataaacaagtggagcagtacatgtcattccacaagctcccggctgacatgcggcag
aagatccacgactactatgaacatcgctaccagggcaagatcttcgacgaggacaacatc
ctgaacgaactcaacgatcctctgaaagaggagatcgttaactttaactgtaggaaactg
gtcgcgaccatgcctctgttcgccaacgccgatcccaacttcgtcaccggaatgctgagc
aagctgaagttcgaggtcttccagcccaacgattacatcatccgcgagggcaccgtgggg
aaaaagatgtacttcatccagcacggcgtcgcgagcgtcatcaccaagcacaacaaggag
atgaagctgacggacggatcgtacttcggagaaatctgcctcctgacgaaaggacgtcgc
acggctagtgtccgcgccgacacgtactgccgcctcttctctctctccgtcgaccatttt
aacgaagtgctggaggaatacccgatgatgcgacgcgccttcgagaccgtcgctatcgac
cgcctggaccgcatcgggaagaagaactccctcctgcttcagaagttccagaaggacctg
aatgctggcgtgttcaatacacaggagaacgagcttctgaagcagattatccgacaggac
cgggagatggtgatgatggtggagaggaagcagtcagtcacaggtgcgaattcgacgccc
atgtccggaaactccatcattaactctccggctcagcctcctttcgccaacagccagttc
cagcagcaaccgcaatcctcgcccatgacccctatggcccccatgtcttacagcacctcg
gcgtccatcatccctgcggctcgcctagctgggagcgtggccttctcgtcgccaggcaac
cctgccacgcccctacagcagcagccaacgcccggaggcgtcatgtctccctgctcgttc
acggcagggcgaaccttccagtatgggtcacccacggcttcacagctgtccctcttgccc
cagctgtcggctgtaatgacacagcagcagcaacagcagcagtcgtcgcagccccagcag
gcgtccccgcagagaaacgaggttcatagcagtcttagcagggacgtgcgccatctttcg
gcctctcagccctcgctgcctcatgaaacctcattagccattaggcaacatccatcctcc
ggagaatccttggcatctatccagcccgcagcaagcccatccccacaagcccctggctct
gccccacagcagggcggcattcgcgccacggtccctccgagggtggcgcttttccgacaa
atgtcatcaggtgcgctaccaccagtgcgagcagcgccctctacggtccagcatagagat
cctatgggatccaggagagagtcggccgtcttaaacagcggccctgagactgaacaagac
aagatgcggtttgcgtcgaatttatga
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