Ictalurus punctatus (channel catfish): 108278604
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Entry
108278604 CDS
T04658
Symbol
barhl1b
Name
(RefSeq) barH-like homeobox 1b
KO
K09360
BarH-like
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278604 (barhl1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108278604 (barhl1b)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
AKAP_110
Motif
Other DBs
NCBI-GeneID:
108278604
NCBI-ProteinID:
XP_017347543
Ensembl:
ENSIPUG00000012709
UniProt:
A0A2D0SXY2
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All DBs
Position
18:5693880..5700528
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AA seq
345 aa
AA seq
DB search
MEASTHGSCSGSGFGIDSLLSHRPGSPVVVVAKGNGSLEGECRSPPEFSAASDADSVCSS
PPSPRREEHEEDEEREAHEQRRGRALALPSHTHHGPVSAAPQPRTVTSSFLIRDILADCK
PLAACAPYSSNGQPTHEASRLASKVADEFIEKIHSNSSSDGEYNKVKEEGDREISSSRDS
PQVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR
TKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQGLVSGLDPGAAALSYLCRGAGAPPP
SAPAALQRPPLVPRILLHGLQGGHEHPPPLPPLPGVVLPRPTPPR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtccacccacggctcgtgctccggctccggctttggcatcgactctctgctg
tcccacagacccggaagtccggtggtggtcgtcgccaagggtaacggcagcttggaagga
gaatgcaggtctccgccggagtttagcgccgcgtcggacgcggacagtgtgtgctcgagc
ccgccgtcgccgaggcgcgaggagcacgaggaagacgaggagcgcgaggcgcacgagcag
aggcgaggccgcgcgctcgcgctgccgtcccacacgcaccacggcccggtgtccgctgca
ccccagccgcgcaccgtcacctcctccttcctgatcagagacatcctggccgactgtaaa
ccgctggccgcgtgcgcgccgtattccagcaacgggcaaccgacacacgaggcgagcagg
ttagcgtctaaagtggcggacgagttcatcgagaaaatccacagcaactcgtcttcagac
ggagaatacaacaaagtgaaagaagaaggagacagagagatttccagcagcagagacagc
ccccaggtgcgactgaagaagccacggaaagcgcgcaccgccttcaccgaccaccagctc
gcgcagctcgagcgcagctttgagcgccagaagtacctgagcgtgcaggaccgcatggag
ctcgcggcctctctcaacctcaccgacacgcaggtgaagacctggtaccaaaacaggaga
acgaaatggaagaggcagacggcggtgggactggaactcttagcggaagccgggaactac
tcggccctacagaggatgtttccgtcgccgtatttctacccgcaaggtctggtgtcgggt
ctggaccccggagcagccgcgctgtcctacctgtgccggggcgccggagctcctccccca
tctgctcccgcggctctacagcggcccccgctcgtaccgcggattctcctgcacggactg
cagggcggacacgagcatccgccgcctctccccccgcttcccggggtggtactgcccaga
cccaccccaccacgatga
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