Ictalurus punctatus (channel catfish): 108278683
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Entry
108278683 CDS
T04658
Symbol
nr5a1b
Name
(RefSeq) steroidogenic factor 1b
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278683 (nr5a1b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108278683 (nr5a1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108278683 (nr5a1b)
Nuclear receptors [BR:
ipu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108278683 (nr5a1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TREH_N
Motif
Other DBs
NCBI-GeneID:
108278683
NCBI-ProteinID:
XP_017347649
Ensembl:
ENSIPUG00000021672
UniProt:
A0A2D0SY86
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Position
18:complement(940897..949745)
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AA seq
482 aa
AA seq
DB search
MECIYNVDVEELCPVCGDNVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAERQECKIDKT
QRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALNRESGLKM
ESMPPALSSTLTDCTLSSILPNLPDISSTKNILLNMPSSTTSTEYEQGLYTLPGCVSMSS
YSPLPSQYPYQSVPCRIIKSEFPDHYASSSSPGSTGGYTYTDQTQTMSSPTPHTGLDLPA
LVLEFVRCEQDELLVQSKISTHLALLQENQSSSSIEPLSSFGLMCHIADQTLFFIVEWAR
SCSFFKELKVGDQMKLLHNCWSELLVLDYISRQVHHDEHDTILLITGQKVDLTSVLTQAG
VTLGELVRGAQQLTQRLQELQLDCREITCFKYLILFNPDVKLLENQEYVGNVYHQVNGAL
LEYTLCVYPQHVDRFSQLLQHLRELRALSTQAEDYLSYKHLNGEVPCNKLLIEMLHAKRA
YV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcatctataatgtggatgtggaagagttgtgcccagtgtgtggggataatgtg
tctggctatcactacggtttgctaacatgtgaaagctgcaagggcttctttaagaggaca
gtacagaacaataagcgctacacctgtgcagagaggcaggagtgtaaaattgataagaca
cagagaaagcgctgtcctttctgccgtttccagaagtgccttaccgtgggcatgcgactc
gaagcagttcgtgcagaccggatgcgagggggccgaaataagtttgggccgatgtacaag
cgagaccgggccttaaagcagcagaagaaagctttaaaccgggagagtgggctaaagatg
gagtccatgccacctgccctgtcatctaccctgacagactgtacacttagtagcatattg
cccaatctgccagacatttcctccactaaaaacatcctcctaaacatgccttcttccacc
acatctacagagtatgagcagggcctgtacaccctacctggatgtgtgagcatgtcttcc
tacagcccgcttccttctcagtatccttaccaatctgtgccctgtcgcatcatcaaatca
gagtttcccgaccactacgccagtagcagctcacctggctccactgggggatacacttac
actgatcagactcagaccatgagctcacccacaccacacacaggcctggacttgccagcg
ttggttttggagtttgtgcgctgtgaacaggatgagctgctggtgcagagtaagatcagc
actcacctggcgcttctgcaagagaaccagagctccagcagtatcgaaccactctcaagc
tttggcctaatgtgccatatcgcagaccaaacactattcttcattgtggagtgggcacgg
agctgcagcttcttcaaagaactaaaggtgggggatcagatgaagttactacataactgc
tggagtgagctgctggtgcttgattatatctccagacaagtgcatcatgatgaacacgac
actatattgctcattactggacagaaggtggatctgacttctgtgctgactcaggcaggg
gtgaccctgggtgagttggtgcgaggggcacagcaactgacccagcgtcttcaggagcta
cagttagactgcagagagatcacctgttttaagtacctcatcctgttcaatcctgatgtg
aagctgttggaaaaccaggaatatgtgggaaacgtgtatcatcaggtgaatggggcattg
ctggaatacacattgtgtgtgtatccgcagcatgtggacagattcagtcaactgctgcag
catctgcgagagctacgagctctaagcactcaggctgaggattacctgagctacaaacac
ctcaacggagaggtaccatgcaacaaactgctcatagagatgctgcacgccaagagagcc
tatgtctga
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