Ictalurus punctatus (channel catfish): 108278958
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Entry
108278958 CDS
T04658
Symbol
si:dkeyp-50d11.2
Name
(RefSeq) calpain-1 catalytic subunit isoform X2
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
ipu04210
Apoptosis
ipu04217
Necroptosis
ipu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108278958 (si:dkeyp-50d11.2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108278958 (si:dkeyp-50d11.2)
04217 Necroptosis
108278958 (si:dkeyp-50d11.2)
04218 Cellular senescence
108278958 (si:dkeyp-50d11.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108278958 (si:dkeyp-50d11.2)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
108278958 (si:dkeyp-50d11.2)
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C2: calpain family
108278958 (si:dkeyp-50d11.2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
108278958
NCBI-ProteinID:
XP_017348263
Ensembl:
ENSIPUG00000021372
UniProt:
A0A2D0T009
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All DBs
Position
18:complement(13360847..13373361)
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AA seq
704 aa
AA seq
DB search
MEPIYATGVAARLRSEWDRNEGLGQNDRALKFLGQDFESLRASCLQSGRLYEDETFPAQP
SALGFKELAPGSAKTKGVCWMRPTEFCTDPHFIVDGATRTDICQGALGDCWLLAAIACLT
LNEPLLRRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVRDGKLLFVHSAEGAE
FWSALVEKAYAKLNGCYEALSGGCTSEGFEDFTGGVTEMYELKIAPANLFSIIRRAVERG
SLMGCSIDITGFFDMEAVTFKKLVKGHAYSVTGVEEVEFKGKLVKLLRIRNPWGEVEWTG
SWSDTSKEWNGIDPSLRERMHNCCEDGEFWMSFNDFMKEFSRLEICNLTADALQSSELKK
WNSALYPGEWRRGSTAGGCRNYPATFWINPQYKIALKNPDTEGQDGCSFLVALMQKDRRL
LRRQGKDMETIGYAIYEVPKEFLGSTGVHLKRDFFLKNTSNARSELFINLREVSSRFCLP
AGEYIIIPSTFEPNKEGNFVLRVFSEKATESEELDDELSADLPEEPVLQESEIDEGFKSL
FFKLAGMEMEIDIPKLQMILNRVVNKHKDIKTNGFEKEACRSMINLLDTTGKGRLGLRDF
HVLWEKIKQYLTVFREFDLDKSGTMNSYEMRLALEAAGFKLNNHIFQLIILRYAKQDMNV
DFDSFVTCLIRLESMFKTFKTMDTDADGVVSFSFSQWISLTMFT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcctatatatgccaccggagtagctgctcgactgaggagtgagtgggaccgcaat
gaaggtcttggtcagaatgatagggctctgaagttcctcggtcaagactttgagtctttg
cgtgccagctgccttcagagtggccgtttatatgaggatgaaaccttcccagcccaacct
tccgcactaggattcaaggagttggcacccggctctgccaaaaccaaaggggtttgttgg
atgagacccacggagttctgtactgacccacacttcattgtagatggagccactcgcacg
gacatctgccaaggagctctaggggactgttggctgctggcggccattgcatgtcttact
ttgaatgagccactgcttcgccgtgtggtacctcacggccagagcttccatcaacaatat
gctggaatctttcacttccagttttggcagtttggggaatgggtagatgtagtgattgat
gaccggctgccagtcagagatgggaagcttctgtttgtccactcagctgaaggggcggag
ttctggagtgcactagtcgagaaggcatatgccaagttaaatggttgttatgaggcactc
tctggaggctgcacctctgaaggctttgaggattttactggtggtgttacagaaatgtat
gaactaaagatagctccagccaacctcttcagcatcatccgaagagctgtagaaagagga
tctctaatgggttgctctatagatatcacaggtttctttgacatggaggcagtcaccttc
aaaaagcttgtgaaaggccatgcctattctgttacaggagtggaagaggtggaatttaaa
ggaaagcttgtaaagctgcttcgcatccgaaacccctggggagaggtggaatggactgga
tcctggagtgacacttccaaggagtggaatgggattgacccttccttaagggaacgtatg
cataattgctgcgaagatggagagttctggatgtcattcaatgatttcatgaaggagttc
agcaggttggagatctgtaatctgacagcagatgcgctgcaaagcagtgagctgaagaag
tggaattcggccctgtacccaggagagtggaggagaggcagcacggctggaggctgcagg
aactacccagcaacattttggatcaacccccagtataaaatcgcactaaaaaacccagac
actgagggccaagatggctgcagctttctggtggcactaatgcagaaggatcggcggctg
ttacgacgacagggcaaagacatggaaacgattggatatgccatttatgaggttcccaaa
gagtttctgggcagcacaggtgtgcatctgaagcgtgacttctttctcaagaacacgtcc
aatgctcgctctgagctgttcatcaaccttcgggaggtgagctcacgcttctgtctgcct
gcaggggagtacatcattattccctccaccttcgaaccaaacaaagagggcaattttgtg
ttgagggttttctctgaaaaagccacagaatctgaggaacttgatgatgagctttctgca
gatctaccagaggagcccgtactacaggagagtgagattgatgaaggatttaaaagtctt
ttcttcaagcttgctggaatggaaatggagattgatataccaaagctgcagatgattcta
aaccgcgttgtaaacaaacacaaggacataaaaacaaatggctttgagaaggaggcctgc
agaagcatgattaatctcctggatacaactggcaaaggaaggttgggcttaagagatttt
catgtgctttgggagaagattaaacaatatcttacagtgtttagagaatttgacttggac
aagtcgggcactatgaactcctatgaaatgcgtctggctttagaagccgcaggtttcaag
ctgaacaaccacattttccagttaataatcttgcgttatgctaagcaggacatgaatgtg
gactttgacagctttgtgacttgtctgatccgcctggagagcatgttcaagacatttaaa
accatggacacagatgcagatggagtggtgtccttcagtttctcccagtggatctcactt
accatgtttacataa
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