Ictalurus punctatus (channel catfish): 108279116
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Entry
108279116 CDS
T04658
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108279116 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108279116 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108279116 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108279116 (vtnb)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108279116 (vtnb)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108279116 (vtnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
108279116
NCBI-ProteinID:
XP_017348590
Ensembl:
ENSIPUG00000008558
UniProt:
A0A2D0T1X0
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All DBs
Position
18:23386737..23394167
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AA seq
465 aa
AA seq
DB search
MKLVVLFLLSVATSFAAEETCVGRCRDGFDPKQKCQCDTLCKYYGSCCIDYDSTCRTKIS
RGDVFDLPEENLTSPASPLALNATTTWSTKVIPTTTAYTSTPIPYPEAETCSGKSFDAFL
QIKNGSIYAFRGENFFELDKTSVMPGYPKLIKDVWGISGPIDAAFTRINCQGKSYIFKGN
KYWRFDGHVLDEDYPRDISVGFDKIPDDVDAAFAIPAPAYHKKEKVYFFKGDRYYQYEFK
HQPSHEDCVRMTKASPSVLFTHYTDLYCDYNWDDLFASLFQDLSGHHKGPRFIARDWVGI
KPPIDAAMVGRLYLNSIASSSPAPSLSPSVAPGRRGRTRGRTRGGRRRKGRGRGSRISRS
TYWDDFGLDYEERYFGAERQSKGQKKGRGGRPSFYDYNYYNTDYADLELVQEKPVPVQNV
YFFQKDKYYRMDLQTKRIDYVNPPYPRSIGKYWLGCKEKELAEKR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtggttttatttttgctttcagtggcaacatccttcgctgcagaagagacg
tgtgttggacgttgtcgggatggttttgaccccaaacagaaatgccaatgtgacactttg
tgcaagtactacggaagctgctgtatagattatgattccacatgccgaactaaaatttcc
cgtggagatgtgtttgaccttcctgaggaaaacctgacctctccagcgagtcctttggct
ctaaatgcaacgacaacatggagtaccaaagtaatccctaccaccacggcgtatacctcc
actccgattccctaccccgaggcagaaacctgcagtgggaaatcgtttgatgccttcctg
cagataaagaacggatcgatttatgccttcaggggggaaaacttcttcgaactggataag
acgtcagtgatgccgggttatcctaaactcataaaggatgtgtggggcatctctggtcct
atcgatgccgcatttactcgaattaactgccaagggaagagttatatattcaagggtaac
aagtactggcgcttcgatggccacgtcctggatgaagattacccgagagatatctcagtg
gggtttgataagattccagatgatgttgatgctgcatttgccattcctgctccagcgtac
cacaaaaaggagaaagtgtatttctttaaaggtgatcggtattaccagtacgagttcaag
caccagccatcgcacgaggattgcgtccgtatgaccaaagcctccccgtctgttctcttt
actcactacactgacctgtactgtgactacaactgggatgaccttttcgcctcgctcttc
caagacttatcaggacatcacaaagggccacgcttcattgccagagattgggtgggcatc
aaacctccaatagatgcagcaatggtgggccggctgtacctgaactccatcgcttcttct
tcgcccgcgccttcactttcaccttctgtagctccaggaagacgtggcaggacccgaggc
aggacccgaggcggccgaaggagaaagggcagaggccgaggaagccgaatcagccgttcg
acctactgggacgattttggcttggattatgaagagaggtattttggagcagaaaggcaa
agtaaaggtcaaaagaagggccgtggaggacgcccgtctttctacgactacaactactac
aacacagactacgctgatttggagctagtgcaggagaaaccagtgcctgtgcaaaatgtc
tacttcttccagaaagataaatactacagaatggatctccagaccaaacgcatcgactat
gtaaaccctccatacccgagatccatcggtaaatactggctaggatgtaaagagaaggag
ctggcagagaaaagataa
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