KEGG   Ictalurus punctatus (channel catfish): 108279116
Entry
108279116         CDS       T04658                                 
Symbol
vtnb
Name
(RefSeq) vitronectin b
  KO
K06251  vitronectin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108279116 (vtnb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108279116 (vtnb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108279116 (vtnb)
   00536 Glycosaminoglycan binding proteins [BR:ipu00536]
    108279116 (vtnb)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108279116 (vtnb)
Glycosaminoglycan binding proteins [BR:ipu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108279116 (vtnb)
SSDB
Motif
Pfam: Hemopexin Somatomedin_B
Other DBs
NCBI-GeneID: 108279116
NCBI-ProteinID: XP_017348590
Ensembl: ENSIPUG00000008558
UniProt: A0A2D0T1X0
LinkDB
Position
18:23386737..23394167
AA seq 465 aa
MKLVVLFLLSVATSFAAEETCVGRCRDGFDPKQKCQCDTLCKYYGSCCIDYDSTCRTKIS
RGDVFDLPEENLTSPASPLALNATTTWSTKVIPTTTAYTSTPIPYPEAETCSGKSFDAFL
QIKNGSIYAFRGENFFELDKTSVMPGYPKLIKDVWGISGPIDAAFTRINCQGKSYIFKGN
KYWRFDGHVLDEDYPRDISVGFDKIPDDVDAAFAIPAPAYHKKEKVYFFKGDRYYQYEFK
HQPSHEDCVRMTKASPSVLFTHYTDLYCDYNWDDLFASLFQDLSGHHKGPRFIARDWVGI
KPPIDAAMVGRLYLNSIASSSPAPSLSPSVAPGRRGRTRGRTRGGRRRKGRGRGSRISRS
TYWDDFGLDYEERYFGAERQSKGQKKGRGGRPSFYDYNYYNTDYADLELVQEKPVPVQNV
YFFQKDKYYRMDLQTKRIDYVNPPYPRSIGKYWLGCKEKELAEKR
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaaattagtggttttatttttgctttcagtggcaacatccttcgctgcagaagagacg
tgtgttggacgttgtcgggatggttttgaccccaaacagaaatgccaatgtgacactttg
tgcaagtactacggaagctgctgtatagattatgattccacatgccgaactaaaatttcc
cgtggagatgtgtttgaccttcctgaggaaaacctgacctctccagcgagtcctttggct
ctaaatgcaacgacaacatggagtaccaaagtaatccctaccaccacggcgtatacctcc
actccgattccctaccccgaggcagaaacctgcagtgggaaatcgtttgatgccttcctg
cagataaagaacggatcgatttatgccttcaggggggaaaacttcttcgaactggataag
acgtcagtgatgccgggttatcctaaactcataaaggatgtgtggggcatctctggtcct
atcgatgccgcatttactcgaattaactgccaagggaagagttatatattcaagggtaac
aagtactggcgcttcgatggccacgtcctggatgaagattacccgagagatatctcagtg
gggtttgataagattccagatgatgttgatgctgcatttgccattcctgctccagcgtac
cacaaaaaggagaaagtgtatttctttaaaggtgatcggtattaccagtacgagttcaag
caccagccatcgcacgaggattgcgtccgtatgaccaaagcctccccgtctgttctcttt
actcactacactgacctgtactgtgactacaactgggatgaccttttcgcctcgctcttc
caagacttatcaggacatcacaaagggccacgcttcattgccagagattgggtgggcatc
aaacctccaatagatgcagcaatggtgggccggctgtacctgaactccatcgcttcttct
tcgcccgcgccttcactttcaccttctgtagctccaggaagacgtggcaggacccgaggc
aggacccgaggcggccgaaggagaaagggcagaggccgaggaagccgaatcagccgttcg
acctactgggacgattttggcttggattatgaagagaggtattttggagcagaaaggcaa
agtaaaggtcaaaagaagggccgtggaggacgcccgtctttctacgactacaactactac
aacacagactacgctgatttggagctagtgcaggagaaaccagtgcctgtgcaaaatgtc
tacttcttccagaaagataaatactacagaatggatctccagaccaaacgcatcgactat
gtaaaccctccatacccgagatccatcggtaaatactggctaggatgtaaagagaaggag
ctggcagagaaaagataa

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