Ictalurus punctatus (channel catfish): 108279216
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Entry
108279216 CDS
T04658
Symbol
pde6b
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta isoform X1
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00230
Purine metabolism
ipu01100
Metabolic pathways
ipu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
108279216 (pde6b)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108279216 (pde6b)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
108279216 (pde6b)
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Gene cluster
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
GAF_3
Motif
Other DBs
NCBI-GeneID:
108279216
NCBI-ProteinID:
XP_017348764
Ensembl:
ENSIPUG00000004687
UniProt:
A0A2D0T1H4
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Position
18:20742263..20755868
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AA seq
854 aa
AA seq
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MSIKNEDVEKFLDENQEFTKRYFAKKLKPGTVASIMKVPESKVDLDSFGMMCQVEEGAIF
FDLIKEMQENVNMEKVIFKILKRVSALIHADRCSLFMYRQRNGIAELATRLFNVNASSKM
EDCVVPPDSEIVFPLDIGIVGHVAQTKKHINVKDVKENSYFSTFVDELTEYTTRNILATP
IMNGKDVVAVIMAVNKNNGPYFTDEDEDLFLKYLKVGTLNLKIYHLSYLYNCETRKGQLL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDVWPVLMGEQAP
YSGPVTPDGREIIFYKVIDYILHGKEDIKVIPNPPPEHWALASGLPTYVAESGFICNIMN
APAEDMFKFQSEALDESGWTIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDEQDEQLME
ALTQFLGWSALNTDTYDKMNKLENRKDIAQDMVLYHVKCRDDEIQDILKTRECFGKEPKD
CEEDELWQILKKELPGKNKFEIYEFRFSDFDCTELDLVMCGIQMYYEVGVVKKFQVPQEV
LVRFMYSVSKGYRRITYHNWRHGFNVGQTMFTLLTTGQLKRYYTDLEVMAMITAGFLHDI
DHRGTNNLYQVKSQNPLAKLHGSSILERHHLEFGKFLLGDESLNIFQNLNRRQTEHVFHL
IDIAIIATDLALYFKKRTMFQKIVDLSETYEDEKKWVDFLSLETTRKEIVMAMMMTACDL
SAITKPWEVQSKVALSVAAEFWEQGDLERTVLEQQPIPMMDRNKAAELPKLQCGFIDFVC
TFVYKEFSRFHKAIQPMFDGIQNNRKEWKALQEAYEAKLKEAEEAAKAKAEAEAAKKAAA
NNPSSSGSKTCSIC
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaaaacgaagatgtggagaagtttctagatgaaaaccaagagttcacgaag
agatactttgcaaaaaagctcaaacctggaactgtggcatccatcatgaaagtcccagag
tccaaagtggatttggactcttttgggatgatgtgtcaggtggaggaaggcgcaatattc
ttcgatttgatcaaagagatgcaggagaacgtcaacatggagaaggtgatcttcaaaatc
ctgaagcgagtcagtgctctgatccatgctgaccgatgcagccttttcatgtacagacag
aggaatggcatcgctgaattggccactcgactgtttaacgtcaatgcttcatcaaagatg
gaagactgtgtggttccaccagactctgagattgtcttccctcttgatatcggaatagtc
gggcatgtcgcccaaactaagaaacacatcaatgtcaaggatgttaaagagaatagctac
ttcagtacgtttgttgatgagctgacagaatacaccacccgcaacatcttggctactccc
atcatgaacggcaaagatgtggtggcggtcatcatggcagtcaataaaaataacggaccc
tatttcacagatgaggatgaagatctttttttaaagtatctcaaagttggcacgttgaac
ttgaagatttaccacctgagctatctgtacaactgcgagacacgtaaaggccagctgctt
ttgtggtccgctaacaaagtgttcgaggagctcacggatatcgagcgtcagttccacaaa
gctttgtacacagtacgggcatacctcaactgtgaccgctactctgtcggtctgctggac
atgaccaaggaaaaggagttctttgatgtctggcctgtgttgatgggagagcaagcacca
tactctggtcccgtcactccagatgggagggaaatcattttctacaaagtcattgactac
attttacatggaaaagaggacattaaagtcataccaaatccacctccagaacactgggca
ctggctagcggcctacccacctacgtagcagaaagtggctttatctgcaatatcatgaac
gcacctgcagaggacatgttcaaatttcagagcgaggcactcgatgaaagcggctggacc
attaaaaatgtgctgtctctgccaatcgtcaacaaaaaggaagaaattgttggagtggca
actttctataacaggaaagatggcaagccatttgatgagcaggatgaacaactaatggag
gctttgacccaatttctgggctggtcggcgctcaacacagacacctacgacaagatgaat
aaactggagaacaggaaagacatcgcccaggacatggtgctgtaccacgtcaagtgtcga
gatgatgagattcaggatatccttaaaaccagggagtgtttcgggaaagaaccaaaggac
tgtgaagaggatgaactttggcagatcctgaagaaagaacttccagggaaaaataaattt
gagatatacgagttccggttttccgactttgactgcacagaactggatttggtgatgtgc
ggcatccaaatgtactatgaagttggtgttgtgaagaagtttcaggtccctcaggaggtt
ctagtgcggttcatgtactcagtgagcaagggctacagaaggatcacctatcacaactgg
cgccatggcttcaacgttggacaaaccatgttcacattactaacgacagggcagctgaag
cgatactacacagatttggaggtcatggctatgatcactgctggattcctacacgatatt
gaccacagaggcaccaataatctgtaccaagtgaaatcccaaaatccattagcaaagctt
catggttcatccattctggagaggcatcatttagaattcggcaagtttttacttggagat
gagtctttaaacattttccaaaacttgaacagaaggcagacggagcatgttttccaccta
attgacatcgccattattgcaactgaccttgccttgtatttcaagaagaggacaatgttc
cagaaaattgtggatctttctgagacgtatgaggacgagaagaaatgggtcgatttcctt
tctctggaaacgacaaggaaggaaattgtaatggccatgatgatgactgcttgtgatctg
tcagccatcaccaaaccatgggaagttcagagcaaggtggcactctctgtagcagctgaa
ttctgggagcagggtgacttagagaggactgtacttgagcaacaacccattcccatgatg
gacaggaacaaagctgcagaactccctaaacttcagtgtggttttatagactttgtctgc
acttttgtctacaaggagttctcacggttccacaaggccatccaacccatgttcgatggc
atccagaacaaccgaaaagagtggaaggctttacaggaggcgtatgaggcgaagctaaag
gaggctgaagaagcagccaaggcgaaagcagaagcagaagcagccaaaaaagctgctgcc
aataacccatcatcatcggggtccaagacctgctcaatctgctag
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