Ictalurus punctatus (channel catfish): 108279278
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Entry
108279278 CDS
T04658
Name
(RefSeq) NMDA receptor synaptonuclear signaling and neuronal migration factor isoform X1
KO
K23844
NMDA receptor synaptonuclear signaling and neuronal migration factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108279278
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Gene cluster
GFIT
Motif
Pfam:
DUF4347
Motif
Other DBs
NCBI-GeneID:
108279278
NCBI-ProteinID:
XP_017348880
Ensembl:
ENSIPUG00000008456
UniProt:
A0A2D0T2R2
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Position
18:complement(3099846..3139775)
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AA seq
600 aa
AA seq
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MTRRLSFILLRLCRCDGWCVYDGSCVSLCRAARAFGEYLHAHPESRNGSDHLLSDTLIGH
DSDSPDSVCAQNHNHQHSFSLQDSNSSAEPNLIDPTLCLLQTSADPSTSSESRLSLERSF
SVEEEQQKCVECSLQPSRVYTISCESAMLAGSRTSKESLELDVLREGRDAPSASQTLAHA
STSSSPIQHHHHHHVNQQHNAAGPNLQQPAGGASGSAGAGSSQHQHHHHHHHHHHLSQPL
QSSVSAHNIRGWGEGKECGLACDLCAGEPSRSHGSLELESSGRDPGKQRRPLERMSSVDR
VTFIDREDSQWYPKENMFSFQTATTTMQANFRKHLRMVGSRRMKAQTFAERRAKSFNRSW
SDPTPVKQDSLPDSKDSGDLQLPSAAQDEGGCDDTGWEEEKEMERLACESDDFIPPKVML
ISSKVPKAEYVPNIIRRNDPSIIPILYDHEHATFDDILEEIEKRLTSYRRGCKIWRMLIF
CQGGPGHLYLLKNKVATFAKVEKEEDMSQFWKRLSRFMSKVNPEPNLIHVMGCYVLGNPN
GEKLFQKLKNLMRPYSVTFESPLELSAQGKEMIEMYFDFRLYRLWKTRQHSKLLDYEDLL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaggctctcttttatcttgctgcgcttgtgtcgatgcgatggctggtgtgtg
tatgatggatcttgcgtgtctctttgcagagcagcccgagcatttggagagtaccttcac
gctcaccccgagagccgaaacggatcagatcacttattgtctgacaccctcattggccac
gactccgactcgccggatagtgtttgtgcccagaaccacaaccaccagcacagcttctct
cttcaggactcgaacagcagcgccgagcccaatctgatcgacccaacgctgtgcctgctg
cagacttcagccgacccctcgacctcctctgagagccgcctgtcgctagagcgcagcttc
tcggtcgaggaggagcagcagaagtgcgtggagtgctcgctgcagccatcacgcgtctac
accataagctgtgagagcgccatgctggccggcagccgtaccagcaaggagagcttggag
ctggacgtgctgagggagggacgggacgccccgtctgcctcccaaaccctcgcccacgcc
tccacctcctcctcacccatccagcatcaccaccaccaccatgtcaaccagcagcataac
gccgctgggccgaatttgcagcagcctgcaggcggagcgtcaggaagtgcaggagcaggt
tcatcgcagcaccaacaccaccaccatcaccaccatcaccaccacctctcgcagcccctg
cagagttccgtcagcgcccacaacatccgcggctggggcgagggcaaagagtgcggcctg
gcgtgcgacctgtgcgccggagagccgtcacgcagccacggctcgctagagctggagagc
agcggtcgagacccaggcaagcagcgccgcccactagagcgcatgagcagtgtggaccgg
gtgacttttatagacagagaagacagccagtggtaccccaaagagaacatgttcagcttc
cagactgctaccacgaccatgcaggcaaatttccggaagcaccttcgaatggtgggcagc
agaagaatgaaagctcagacctttgcagagcgcagggcgaagagcttcaaccgctcctgg
agcgacccgaccccggtcaagcaagactcgctacccgactcaaaagacagtggagatctg
cagctgccgtctgctgcacaagatgagggaggctgtgacgacacgggctgggaggaggag
aaagagatggagcgactggcctgtgaaagcgatgacttcatccctccgaaagtcatgttg
atatcatcgaaagttcctaaggcggagtatgtccccaatattattcgcagaaatgaccct
tccattatccccatactttatgatcatgagcatgcgacattcgatgatattttggaggag
attgagaaaagactgacttcctataggagaggatgcaagatctggcgcatgctcatcttc
tgtcagggtggaccagggcatttgtacctgctgaagaataaagtggccacttttgccaag
gtggaaaaagaggaggacatgagccagttttggaaaaggctaagcagatttatgagtaaa
gtaaacccagagcctaacctgatccatgtcatgggctgctatgtcctggggaatcctaat
ggagaaaagctgttccagaagctgaagaacctgatgaggccttattcagtcacctttgag
tcaccgctggagttatctgcacagggaaaggaaatgattgaaatgtattttgacttccgc
ctctaccgattgtggaagacgaggcagcactcgaagctcttggactacgaagatctgttg
tga
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