Ictalurus punctatus (channel catfish): 108279741
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Entry
108279741 CDS
T04658
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108279741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108279741
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108279741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
108279741
NCBI-ProteinID:
XP_017349660
Ensembl:
ENSIPUG00000008531
UniProt:
W5UHI5
LinkDB
All DBs
Position
19:10793063..10870229
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AA seq
876 aa
AA seq
DB search
MCESYARSLMRVAVAQLCQALGWDAVQLSACELLSDVLERYLQQLARGCHRYSELYGRTD
PGLSDLEQAFGLMGVSVAELEDYINNLEPVGFFHSIPQFPISKSSVLQFPTSSFDTDVRN
ALRGDKRDYIPEYLPPLAPLHQDEEEEEQVPADMGTSAEAMQVSLGEEEEGEDEENDENW
LGPRVSDSPRPEGLLPAAKRPRLGTKPGSSPEWSFEPREPLSSLNAQHMARSPSPSLPLE
MVRPSPLTPTPGQKPKVSSLSPARQKNKSPKRVIGATPSAISARPSSVTPPKSAQKAGKR
SPGRPRSPRSPRPGPTQLGRGWLIPNTDEVSQDGELKDEAIEDSIAAVIARACAGGVGVA
DPFAYDSDSDSEGFPKSPPKHMPKHTLPQPKLTPVLGVKHPPLMTPTLLSAGPNRWTMDD
SIDEVIRKANQGQGLPCQSPPEPPYFSTPSDSPPTPPPPTLNPPQERKDPVASSLLKKKL
KKDIKTKLKKKDRERLKEKGKDKSKNKEKNKEKKREKDRGQGEDGKTPWTELSLGTEERR
DGAGGKKEKDKHKDKKKDKEKSKKDKEKRDKGKERGGKEEKRLSLAAKESASASLPLFSP
SSCLRVPSMLPPLQPILPETLFHPKETKSKEKDKKKDKKEKKKKKDKEKERDKDRERERP
REKEEKKKEKEKEKKEKVKEKEKPKVEKPGLMVEAPVVPQSPVIPRLKLKVGAGQDKIVI
SKVTPDLEPTPPPPRTPVSRSGPGARMRSPPALPPPVPPPVVPAPLPPPVLVPPPPPPVF
QAPASQAKARGCSVVTETVSAYVIRDEWGNKIWICPGCNKPDDGSPMIGCDECDDWYHWP
CVGIIAAPPEDQPWYCVKCSGKKKDKKTKKRKRKAH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagctatgcgcgctcgctgatgcgggtggcggtggcgcagctgtgccaggcg
ctgggctgggacgcggtgcagctctccgcctgcgagctgctctccgacgtgctggaacgc
tacctgcagcagctagcccgaggctgccaccgctactccgagctgtacgggcggacagac
cctgggctgagtgaccttgagcaggcctttgggctgatgggggtgagcgtcgcggagctt
gaagactacattaacaacttggagccagtggggttcttccactccatcccccagttcccc
atcagcaagagcagcgtgctgcagttccccacctccagcttcgacacagatgtccgcaac
gccctgcgtggagacaagagggactacatcccagaatacctccctcccctcgccccacta
caccaagatgaagaggaggaggagcaggtccctgcagacatgggcacgtcggccgaggcc
atgcaggtgtctcttggcgaggaagaggagggtgaggatgaagaaaacgatgagaactgg
cttggcccacgtgtgtcagatagccccagacccgaaggtcttttacctgctgcgaagcga
ccacgcctgggaaccaaaccaggaagcagccccgaatggagctttgagcctcgcgaacct
cttagttcactcaacgcccagcacatggcacgctccccttccccttcactgcccctcgaa
atggttcgtccctctccgttgactccaactccagggcaaaaacccaaagtctcctccctt
tctcctgctcgccagaagaataaatcacccaaaagagtgattggtgccaccccttctgcc
atatctgcccgtccttcttcagtaacaccacccaaaagtgcgcagaaggcagggaaaagg
tcgcctgggagaccccgaagccctcgtagccctcggccagggcccacgcagttaggacgt
gggtggttgatccctaacacagatgaggtttcgcaggacggcgagctcaaagacgaggcc
attgaggactccattgcagcggttatagccagggcgtgtgcaggcggagtgggtgtggcc
gacccgttcgcatatgactcggactcagacagcgaggggtttccaaagagcccgcccaaa
catatgcccaaacacacactcccccaaccaaaactcacacctgtccttggtgtaaaacac
ccacccttgatgacgccaacgttgctctcagccggcccaaaccgctggaccatggatgac
tccatagatgaggtcatccgaaaggccaaccagggacagggtctgccttgtcaatcacca
ccagagcccccctacttctccaccccgtccgactctccgcccaccccgccacctccaact
ctcaaccccccacaggagcgaaaagatcccgtggcctcgtctctcctaaagaaaaaactc
aaaaaagatatcaaaactaagctgaaaaagaaggaccgagagcggctaaaggagaaggga
aaagacaaaagcaagaataaagagaaaaacaaggagaagaagagagagaaggatcgaggc
cagggggaggacggaaagactccttggacagagttatcgctcggaacagaggagaggaga
gacggtgctggagggaagaaggagaaggacaagcacaaggacaagaagaaagataaagag
aagagcaagaaggacaaagagaaacgagacaagggcaaggagagaggtgggaaggaggag
aagaggctgtcgcttgcagccaaggaaagtgcctctgcttcactacctctcttcagccct
tcttcctgcctgcgtgtcccctcgatgcttcccccactgcaacccatcctccctgaaaca
ctgttccaccccaaagagaccaagagcaaggagaaggacaagaagaaagacaaaaaggag
aaaaagaagaagaaagacaaggagaaggaacgagacaaggacagggagcgggagaggccc
agggagaaggaggagaagaagaaggagaaagagaaagagaagaaagaaaaagtcaaagaa
aaagagaagcccaaagtggagaagcctggtttaatggttgaagcccccgtggttcctcag
tctcccgtcatacccagactaaagctgaaagttggagccggacaggacaaaatcgtcatc
agtaaggtaacccctgacctggaacctactccaccacctcctcggacgccggtgtcgcgc
tccggtcccggtgctcggatgcgttctcctcctgcccttcctccccctgtcccacctcca
gtcgtccccgcacctctcccaccacctgtgttggtgccacctcctccgcctccggtgttt
caggccccagccagccaggctaaagctcgtggctgcagcgtcgtcacggagacggtcagc
gcttacgtgattcgtgacgagtggggtaataagatctggatctgccctggctgtaataaa
cctgatgatggcagtcccatgatcggctgtgatgagtgcgatgactggtatcactggccc
tgtgtaggaatcatagctgctcccccagaggatcagccctggtactgtgtgaagtgttct
ggcaagaaaaaagacaaaaaaacaaaaaagaggaaacgtaaagcgcactga
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