Ictalurus punctatus (channel catfish): 108279782
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Entry
108279782 CDS
T04658
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108279782
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
108279782
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
108279782
NCBI-ProteinID:
XP_017349748
Ensembl:
ENSIPUG00000019009
UniProt:
A0A2D0T4B8
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Position
19:complement(20470255..20476195)
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AA seq
501 aa
AA seq
DB search
MKTKNTEGFISCECEVDEKAPEGEKAGELQDHEVVPDPGVTGLITQMETSVSGTVEKDSL
GHEVVSEIRTAEITPNPNEAMETCMSEQDRDQHPETSVGTVEEDCTGHEVVPASGTAEIT
PKPNKEMETSVCEPNGDQHSDAEKRTVEKDTVSPLLGGGGSLALLSTLYLDESADELSES
ESDSSSSTSSSSSSSSDPIVMVTNQLEQDEEEDGVAPGKKAAPVRTQDELLIEDLPAVEN
LTISLPDGTDMEPVGIISSIVDQLVIIESKKDTPTLNDDSVLFNKDRMSIGRVFEVFGPV
CQPYYILRFNSQEDIEQRDLKIKEPVYFAPKIKDFTEYIFVEQIKQTKGSDASWKNDQEP
PLEALDFSDDEQEKMAKQKLKAQRRPQQQRQEESDSADSESSATRPPPPPRRKPRQNRNP
SRGRPTHHEPHGGFHANYHANPHFQQDFMHRPPDPYRPHFRGHGYPPYPQAPPPHMGIDP
WHPYPYPGPMFYPPPPPPPSN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaaaaacactgaaggcttcatatcctgtgagtgtgaagtggatgaaaaagca
cctgaaggtgagaaagcaggtgaactgcaggaccatgaagtcgtacctgatccaggtgta
acaggcctgattacgcaaatggaaacgtctgtgtctgggaccgtggagaaagactctctg
ggccatgaggttgtttctgagatacgtacagcagagatcactccaaacccgaatgaggcg
atggagacgtgcatgtctgaacaggacagagatcagcaccctgaaacttctgttgggact
gtagaggaagattgtacgggccatgaagtcgtgcctgcatcgggaacagccgagatcacc
ccgaagccgaacaaggagatggagacgagcgtgtgtgaaccgaacggagatcaacactct
gacgctgagaagaggactgtagagaaagacacagtgagccctctccttggaggaggagga
tcactggctctgctgagcacgctgtacctagatgagagcgcagacgagctctcagagagt
gagtcggactcctcttcatcaacatcttcatcatcatcttcctcatccgaccccattgtc
atggtgacgaatcaacttgagcaggatgaagaggaagacggtgttgctcctgggaaaaaa
gcagcaccagtgagaactcaagatgagctgcttatcgaggaccttcctgcagtagagaat
ctgaccatcagccttcctgacggcaccgacatggagccggttggaatcatctcaagcatc
gtggatcaactcgttatcatcgagtctaaaaaggacactccgaccctgaatgacgacagc
gtcttattcaacaaggacaggatgtctatcggcagggtgtttgaagtctttggtcctgtg
tgccagccgtactacatcctgagattcaactctcaggaggacatagaacagagggacctc
aaaataaaggagccagtttactttgcccccaaaatcaaagacttcactgagtacatcttc
gtagagcagatcaagcaaactaaaggatccgatgcttcatggaaaaacgaccaggagcca
ccgctagaggccctggatttcagtgatgatgagcaggagaagatggccaagcagaaactg
aaggcacagaggagaccacagcagcagagacaagaagagtctgactcggcagacagtgag
tcctcggccactagacctccacctcccccaaggagaaaaccccggcagaacaggaacccg
tcgcgcggccggcccacgcatcacgagcctcatggtggcttccacgctaactatcacgcc
aatcctcactttcaacaagacttcatgcaccgacctcctgacccgtacaggccccacttc
cgaggtcatgggtaccctccctacccccaagccccaccccctcacatgggcatagacccc
tggcacccatacccttacccaggacccatgttctaccctcctccaccaccacctccatca
aactaa
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