Ictalurus punctatus (channel catfish): 108279881
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Entry
108279881 CDS
T04658
Symbol
flncb
Name
(RefSeq) filamin-C isoform X2
KO
K27393
filamin-C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108279881 (flncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108279881 (flncb)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108279881 (flncb)
Intermediate filaments
Intermediate filament-binding proteins
108279881 (flncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Big_3_5
Y_Y_Y
CFSR
CarboxypepD_reg
CH_2
Motif
Other DBs
NCBI-GeneID:
108279881
NCBI-ProteinID:
XP_017349948
Ensembl:
ENSIPUG00000018871
UniProt:
A0A2D0T4W0
LinkDB
All DBs
Position
19:complement(20326948..20404982)
Genome browser
AA seq
2812 aa
AA seq
DB search
MMSSNAYYEQQQQQFQQPPQYYYQDGEDGGGEEEMPATEKDLAEDAPWKKIQQNTFTRWC
NEHLKCVNKKIVDLQKDLSDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEF
LEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEEDEDAKKLTPKQRLL
GWIQNKVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWEMWDPNQPVENAREAMQQAD
DWLGVPQVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRSKTLHPKRAKAYGPGIE
PRGNMVLKPAEFIVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVVYLPKVEG
LHKVKVLFAGQDINNSPFLVNVSKALGDPNKVQARGPGLEPVGNVANKPTYFDIYTAGAG
AGDVGVIIVDSQGRRDTVEIILENRGDSIFRCTYGPVLEGPHVIYVTFAGQQIPRSPFTV
HISEALLSSVPAGSPVQIIPQSIRTPPSEKSKKMPPPTPPKPRRATSNPNACRAIGRGLQ
PKGVRVKEVADFKVYTRGAGSGDLRVLIKNPKGGDEPVKVCDLGDGVYECNYYPVFPGKY
TVIITWGGHAIPRSPFEVLISEDAGAQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLG
FSIEGPSQAKIECDDKGDGSCDVLYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAANDV
FPEKVKCYGPGLEPTGCIVNKPADFTIDAQGAGRGQLKIYAQDSEGYPIDIQITDNGDDT
FFCIYIPTKPIKHTIIITWGEVNVPNSPFRVNIGEGSHPENVKVYGPGVEKSGLKANEPT
YFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGPGRYTIMV
LFADQEIPISPFRIKVDPSHDANKVRAEGPGLCKIGVEVGKPTHFTIYTKGAGKATPEVH
FTGALKVEAVSDFEIIDNHDYSFTVRYTALQQGNMSISVCHGGDPIPKSPFIINVAPPLD
LSKVKVQGLNTKVDVGKDQEFTINTRGAGGQGKVDVKILSPSRRPIPCKVESGTSNEVHS
VQYIPPEEGPYKVDISYDENPVPGSPFTVEGVMPPDPSKVRAYGPGLRGGIVGKPAPFAI
DTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFADQHVPGSPF
KAMVQSVFDPSKVTVSGPGLESGKVDEAASFTVDCSKAGDADLTIEIISDSGAQAQVHIQ
NNSDGTYSITYVPPFHGMYTITIKYGGHAVPKFPARVQVDPAIDTSGIKVYGPGVEPRGV
LREVNTHFIVDTRTYNVTGGNHVKACIVNPSGTNTDAYITDKGDGTYRVEYTAYEDGVHL
IEVLYDDVPVPKSPFRVSVTEGCDPSRVRAYGPGLEEGLVNKSNRFTVETRGAGTGGLGL
AIEGPSEAKMSCKDNKDGSCSVEYIPFTPGEYDVNITFGGLPIPGSPFRVPVRELVDPSK
VRCSGPGLGNGVRAHVPQTFTVDCSNAGLAPLEVLLYSPTGATEPVSITDNGDGTHTVIY
TPSKDGPYTVYVKYADQEVPRSPFKVKALPAHDASKVRASGPGLNAAGVPASLPVEFTID
ARDAGEGLLTVQILDPDGCRREVSVYVEDWGRRVWDSHIVKGTIPFYILKKGCDPEGKPK
KANIRDNRDGTYTVSYVPDMTGRYTITIKYGGDEIPFSPYRIHALPTGDASKCLVTVSIG
GHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELDVDVVENSDGTFDIYY
TAPEPGKYIITIRFGGEHIPNSPFHVVACDTVPIIEEPCDKVQLQQPYSPYQGYSPHWAT
EEPVTAINGMEPMLRPFSLVIPFTVQKGEITGEVRMPSGKTARPNITDNKDGTVTVKYAP
TEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGMVNKPASFTIVTKDAG
EGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGDYNIIVKFDDKHIPGSPFTAKITG
DDSMRTSQLNVGTATDVSLKITETDLSSLTASIRAPSGNEEPCLLKRLPNRHIGISFTPK
EVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVFGKGLVEGHTFEVAEFVVDTRN
AGYGGLGLSIEGPSKVDINCEDIEDGTCKVTYCPTEPGTYIINIKFADQHVPGSPFTVKV
LGEGRMKESITRRRQAPSIATVGSTCDLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRT
ERTEISKTRAGETKREVHVEESTQLGGDPFRDVFGGFMGPFSGIQSRQSEGEASTQEMTA
QVTSPSGKTEDAEIIEGENSTYSVRFVPQEMGPHTVNVKYRGQHVPGSPFQFTVGPLGEG
GAHKVRAGGTGLDRGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVA
YVVQEPGDYEVSIKFNDEHIPDSPFIVPIATLSDDARRLTVTSLQETGLKVNQEASFAVQ
LNGARGMIDAKVHTPSGAMEECYITELDNDKHAIRFIPRENGVHSIDVRFNGSHIPGSPF
KIRVGEPGQVGDPGMVSACGPGLEGGTTGVPSEFIVNTVNAGTGALSVTIDGPSKVKMDC
QECPEGYKVTYTPMAPGSYLISIKYGGPQHIVGSPFKAKVSGPRLSGGHSLHETSSVLVE
TVTKSSTMAGSFASLPKFSSDASKVVSRGSGLSKAFISQKNTFTVDCSKAGTNMLMVGVH
GPKTPCEEVYVKHMGNRMYNVTYTVKEKGDYILIVKWGDEMVPGSPFHVTVP
NT seq
8439 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagcaacgcgtactacgagcagcagcagcagcagtttcagcagccgccgcag
tattactaccaggacggcgaggacggaggcggagaggaggagatgcccgccaccgagaag
gacctggccgaggacgcgccgtggaagaagatccagcagaacacgttcaccagatggtgc
aacgagcatctgaaatgcgtgaacaagaagatcgtggacctgcagaaagacctgagcgat
ggcctcaagctcatcgggctcctagaggtgctgagccagaagaagatgtacaggaagtac
cacgccaggcccaacttcagacagatgaagctggagaacgtgtccgtcgcgctggagttc
ctggaaagggagcacatcaagctggtgtctatagacagtaaagccatagtggatggcaac
ctgaagctgatcctaggactgatatggaccctcatcctacattactccatctccatgcca
atgtgggaggatgaggaagatgaagatgccaagaaactcactcctaagcaacgccttctg
ggctggatccagaacaaagtcccccagctgcccatcaacaacttccaccgtgactggagg
gatggcaaagcgctgggagccctggtagacaactgtgcccctggtctgtgtcctgactgg
gagatgtgggaccccaatcagccagtggagaatgccagggaggccatgcagcaggctgat
gactggcttggtgtccctcaggttatagctcctgaggagattgtggacccgaatgtggat
gagcactctgtcatgacttacctgtctcagttccctaaagccaagttgaagcctggtgct
ccactgcgctccaaaactctgcaccccaagagggccaaagcctacggccctggcatcgag
cccagaggaaacatggtgttaaaaccagctgagtttatagttgagacagtagaggcgggg
cttggtgaggtgctggtgtatgtcgaggatcctgaaggtcacacggaggaggctcgagtg
atccccaacaatgacaagaacagaacctactctgtagtctatttgcccaaagtggaaggt
cttcataaggtgaaggtgttgtttgctgggcaggacattaacaacagccccttccttgtg
aacgtgtccaaagctctgggagaccccaacaaggtgcaggcacgtggtccaggcttggaa
ccagtgggcaatgtggccaacaagcccacttacttcgacatctatactgcaggtgcgggc
gcaggtgacgtgggtgtgatcattgtggattcacagggtcgcagggacacggtggagatc
atactggagaacagaggggacagcattttccgctgcacatacggccctgtactggaagga
cctcatgttatctatgtaacattcgctggccagcaaatacccagaagcccttttaccgta
cacatctcagaggctcttctgagcagcgtgccagccggctccccggttcagataatccct
cagtctattcgcacgccgccctctgaaaagtccaagaaaatgccccccccaacgccgccc
aaacccaggcgagcaacgagtaacccgaatgcttgtcgggccatcggacgtggtctacag
cccaagggtgtgcgggtgaaggaggtggctgattttaaagtttacaccagaggggcaggc
agcggagacctgcgggtcctcatcaaaaacccaaagggtggagatgaacctgtgaaagtg
tgtgacttgggcgatggagtatatgagtgtaactactaccctgtttttcctggaaaatac
actgtgatcatcacctggggaggacacgccatcccacgcagtccattcgaggtgttgatc
agtgaggatgcaggagctcagaaggtgagagcgtggggtccaggcctggagacaggcatg
gtgggcaagtcagctgactttgttgtggaggccatagggacagaggtgggaactctggga
ttctccattgaaggcccgtctcaggctaagatcgagtgtgatgataagggtgatggctcc
tgtgatgttctatactggcccacggagcctggtgactatgctgtccatgtcatctgtgat
gatgaggacattaaggacagccccttcatggcacacatacttcctgcagccaatgatgtt
tttcctgagaaggtgaaatgttatggtcctggtttggagcccaccggctgcatcgtaaac
aaaccagcagacttcactatagatgctcaaggagcaggcaggggtcagctgaagatctac
gctcaggactctgaaggctaccctattgacatccaaattacagacaatggtgatgacaca
ttcttttgcatctacatccctacaaaacccatcaaacacaccatcatcatcacctggggt
gaagtcaatgtacccaacagtccattcagggtgaacatcggagaaggcagccatcctgag
aatgtgaaggtgtatggaccgggtgtggagaaaagtggtctgaaagccaatgaacccacc
tacttcactgtggattgcagtgaggctggccaaggagatgtgagcattgggatcaagtgt
gctcctggagtggtaggccctgccgaggccgacatcgatttcgacattatcaaaaatgac
aacgacacattcactgtcaaatacacaccaccaggccctgggcgatacactatcatggtg
ctgtttgctgatcaggagatacccatcagccccttccgtattaaagtagatccctctcat
gatgctaataaagtgagagcagagggtccaggactctgcaagattggtgtggaagtgggc
aagccaacacacttcacgatctacacgaaaggagcgggcaaggccacgccggaggtgcac
tttacaggagcgcttaaagtagaggctgtcagtgactttgagatcatcgataaccatgac
tactcctttactgtccgttacactgcactacagcagggtaacatgagcatttctgtgtgc
catggaggtgaccccatccccaaaagccccttcattatcaatgtcgctcctccactggac
ctcagcaaggtcaaagtccaaggacttaataccaaagtggatgttggaaaagatcaggaa
ttcaccattaacacacgtggagccggtggccagggcaaagtggatgtgaaaatcctctca
ccttctcgacggccaatcccgtgcaaggttgagtctggaacttccaatgaagtgcactca
gtgcagtacattcccccagaagagggaccctacaaagtggacatcagttacgatgagaac
cctgtgccagggagcccctttactgtggaaggggtcatgcctcctgatccctctaaagtg
cgagcctatggcccaggcctgaggggaggaattgtgggtaaaccagctccatttgccatt
gacaccaaaggtgccggcactggtggactaggcttgacagtggagggtccctgtgaggcc
aagattgagtgccaggacaatggggacggctcctgctctgtatcgtacttgcccactgag
ccaggagaatacgccattaacatcctgtttgctgatcagcacgtccccgggtcacccttc
aaagccatggtgcagtctgtattcgaccccagcaaggtgacagtcagcgggccaggctta
gagagtggcaaagtggatgaggctgcatccttcacagtggactgttccaaagcaggggac
gctgatctcaccattgagatcatctcagactcgggtgcccaggctcaagtgcacatccag
aacaacagtgatggcacatattccatcacctatgtgcccccattccatggcatgtacaca
atcaccattaaatatggtggacatgctgtgccaaaatttcctgcccgtgtccaggtggat
cctgctatcgacaccagtgggatcaaagtctacggaccaggagttgaacccagaggagtc
cttagagaagtcaatacacactttattgtggacacccggacttacaatgtgaccggagga
aaccacgtcaaagcctgcattgttaacccttcaggcaccaacacagatgcgtacatcacc
gataaaggggacggaacctacagagtggagtacactgcttatgaagatggtgtgcacctg
attgaggtgttgtatgatgatgtgccggttcccaagagcccattcagagtgtcagtaaca
gaaggctgtgacccgagccgtgtgcgggcgtatggaccgggcctagaagagggactagtc
aacaaatccaaccgcttcactgtggagaccaggggcgctggtacaggtgggcttggcttg
gccattgagggcccatctgaggctaagatgtcctgtaaggataataaagatggcagttgt
agtgtggagtacattcccttcactcctggagagtatgatgtaaacatcacatttggaggc
cttccaatcccaggcagtccattcagagttccagttcgagagctggtggatcccagtaag
gtgaggtgttctggcccaggcctgggcaatggagtgcgagctcatgtcccacaaaccttc
actgtggactgcagtaacgccggcctggcgccgctggaggtgctactctacagcccaact
ggcgcgacagagccagttagcattacagataacggtgatggtactcacactgtgatttac
accccctccaaggatggtccttacacagtttatgtcaaatatgctgaccaagaagtacca
cgcagtccctttaaggtaaaagccctgcctgctcatgatgccagtaaagttcgtgccagt
ggtcctggtcttaacgcggctggtgtccctgccagccttccagtagaattcaccattgat
gcccgtgacgctggtgaaggactccttactgtccagatcctggatccggacgggtgcagg
cgcgaggtctctgtgtatgtggaggactggggaaggagggtgtgggacagccatattgta
aagggcaccatccccttctatattcttaagaaaggctgtgatccagagggaaagccaaag
aaagcaaacatcagggataacagagatggaacatacacagtgtcctatgtgccggatatg
acaggccgctacaccatcaccatcaaatatggtggagatgagattccgttctctccatac
cgcatccatgcgctgcccactggagatgccagcaagtgtttggtcacagtttccattgga
ggacatggcctgggctctggactcggacccaccattcagattggcgaggagacggtcatc
actgtggatgcaaaggctgctgggaagggaaaagtcacgtgcaaagtgtccacccccgat
ggcgctgaactggatgtggatgtggtcgagaactcagatggaactttcgatatctactac
acagctccagagccagggaaatacatcatcactattcgctttggaggagagcacatcccc
aacagccccttccatgtggtggcgtgtgataccgttcctataatagaggagccgtgcgat
aaagtgcagttacagcagccctactcgccttaccaaggctactcccctcactgggccact
gaggaacctgtgacagccattaatggcatggagcccatgcttcgtcctttcagtctggtc
atcccgtttacagtgcagaaaggagagatcacaggtgaggtacgaatgccttctggtaag
acagcacggcctaacatcactgacaataaggatggcacggtgacggtgaaatatgcccct
actgagaaaggcctgcatgagatggacatcaagtatgatggcaaccacataccaggaagt
ccactgcagttctacgtcgatgccataaacagtggtcatgtgactgcttatgggcctggc
ctgagtcacggcatggttaacaaacctgcaagcttcacgattgtcaccaaggatgcagga
gaaggtggattgtctctggcagtggaaggtccgtctaaagcagagatcagctgtaaggat
aataaagatggcacctgcaccgtctcctacctgcccactgcaccaggagactataatatc
atcgtcaaattcgatgacaaacacatccctgggagcccctttacagccaagattacagga
gatgactccatgagaacgtcccagttgaacgttggcacagcgacagacgtgtccctgaag
ataaccgagacagacctgagttctctcactgcaagcatccgagctccatctggtaatgag
gagccctgtctgctcaagagactgcctaaccgtcacattggcatctccttcactcctaag
gaagtgggtgagcatgtggtgagtgtgaagaagaacggcaaacatgtaactaacagcccc
ttcaagatcatggtggggcagtcggagatcggagacgccagcaaagtgaaagtgttcggc
aaaggcctggtggagggacacacctttgaggtggctgagttcgtcgtggacaccagaaat
gcaggttatggtggtctgggtctttccatcgaaggacccagcaaagtggatattaactgt
gaagacatagaggatggcacatgcaaagtgacctactgccctacggagccaggcacctac
atcatcaacatcaagtttgcggaccagcacgtgccaggaagtccgttcacagtgaaggtg
ctgggtgagggcaggatgaaggagagcatcaccaggagaaggcaggctccctctatagct
actgtaggcagcacctgcgacctcaacctcaaaatcccaggtaactggtttcagatggtg
tcggcccaagaaaggctaacgcgcaccttcacacgcagcagccacacatatacacgcact
gagcgcacagagatcagcaagacgcgggcaggcgaaacaaagcgcgaagtgcatgtggag
gagagcacacagcttggcggagaccccttcagagatgtgttcggaggcttcatggggccc
ttcagcggcatccagtcccgccaatccgagggtgaggctagtactcaggagatgacagct
caggtgacgagtcctagtggaaaaacagaggacgctgagatcatcgaaggagaaaacagc
acctacagtgtgcgcttcgtgccccaggagatgggccctcacacagttaatgtgaaatat
cgtggccagcatgttcccggcagccctttccagttcaccgtaggtccacttggagaagga
ggagcccataaagtgcgtgcaggtggtactggtctcgaccgtggagtagcaggagttccg
gcggagttcagcatctggacgcgtgaggcgggtgcgggtggtttgtccatcgctgttgag
ggacccagtaaagctgaaatctcatttgaagaccgaaaggacggctcctgtggagtggcc
tacgtggtccaagagcctggtgactatgaggtgtcgatcaaattcaacgatgagcacatc
ccagacagtccattcatcgttcccatagcaacgttgtccgatgatgcccgcagacttact
gttactagcctacaggaaacaggtctgaaagtgaaccaggaagcttcctttgcagtgcag
ctgaatggggcaaggggtatgattgatgctaaggttcacacaccctccggtgcaatggag
gagtgctacatcacagaactagacaatgacaagcatgcgattcgcttcatcccacgtgag
aacggtgtccactccatcgatgtacgcttcaatgggagccacattcctggcagccccttt
aagatccgtgtgggagaaccaggtcaagtcggagacccaggcatggtgtctgcttgtggc
ccaggcctggagggaggaaccacaggtgtgccctctgaattcatcgtaaacacggtcaac
gctggaaccggagctctctctgtcactatcgatggaccctccaaggtgaagatggactgc
caagaatgtcccgagggttacaaggtcacatacacacctatggcccccggcagctacctc
atctccatcaaatatggaggaccacagcatatcgtcggcagcccgttcaaagctaaagtc
tctggtccacgtctgtctggagggcacagtctccatgagacctcatctgtgctagtggaa
acagtgactaagtcatccaccatggccggatcttttgcctccttgcccaaattttcatcc
gatgccagcaaagtggtgtcacgagggtccggtctctctaaagccttcatcagccagaag
aacaccttcacagtagactgcagtaaagctgggacaaacatgctgatggtgggtgtacat
gggccaaagactccgtgtgaagaggtctatgtcaagcatatgggcaacaggatgtacaat
gtcacatacacggtcaaagagaaaggagactacatccttatcgtcaaatggggtgatgag
atggtgcccggtagcccatttcacgtcacagtgccttaa
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integrated database retrieval system
