Ictalurus punctatus (channel catfish): 108279888
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Entry
108279888 CDS
T04658
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108279888 (pparaa)
03320 PPAR signaling pathway
108279888 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108279888 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108279888 (pparaa)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108279888 (pparaa)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
108279888 (pparaa)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108279888
NCBI-ProteinID:
XP_017349973
Ensembl:
ENSIPUG00000014967
UniProt:
A0A2D0T4Y5
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Position
19:complement(16878667..16903524)
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AA seq
570 aa
AA seq
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MVCFKQPPKSCLLFLISQITETDFSENCVSDVSASGLPSWIGEVPGNLLHSERQESCVWG
LDFGPRWGQTYLLAVAARTKSCGVICLMSDPVLAVPWPNTMVDKPNPFSPLPSAGEIVLD
SPLCGELIKEMEELEDISRTFSDDTFNLLCLPDFQESSTSSNSSATLDVLSPASSPSSAA
CGAVTGQDEINPSPLNLECRICSDRASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERHC
KIQKKNRNKCQYCRFHKCLAVGMSHNAIRFGRMPQSEKLKLRAELQIPEKEERKTQLDDW
KTLASQIHEAYLKQFHLNKAKARGFLTGKTNMPPFVIHDLDTLQQAQPVLVTQMLSEGRE
DFPLNVQGQETEDRLFHCCQYISVETVTQLTEFAKAVPGFPSLDLNDQVTLLKYGVHEAF
FALLASCMNKDGMLVTRGSGFITREFLKSLRKPFSDMIESKFQFAMRFNALELDDSDLAL
FVAAIICCGDRPGLGNVSHVECIQESIIHALRLHLQTNHPDDTLLFPKLLQKLADLRQLV
TEHAQLVQDIKETQDASLHPLLQEIYKDMY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtctgttttaagcagcccccaaagagttgtctgctctttctcatttctcagatcact
gaaactgacttttctgagaactgtgtgtcagatgtgagtgcttctggcttgccctcttgg
attggtgaggttccaggaaatctgctccacagtgagaggcaggagagttgtgtgtggggt
ttggactttggcccccgctggggccagacgtatttattggctgttgctgctcgaacaaag
tcgtgtggagtgatctgtctaatgagtgatccagtgcttgcagtcccgtggcccaacacc
atggtagacaagccaaatccattcagcccgttgccctcagcaggggaaatagtgttggac
agccctctatgtggggagctaatcaaggaaatggaggagctagaggacatctctcgaacc
ttcagcgatgacaccttcaacttgctgtgcctgcctgacttccaggaatccagcactagt
tccaacagctctgctactctcgatgttttgagcccagcctctagtccgtcatcagcagcc
tgtggagcagtcacagggcaggatgaaatcaaccccagccccctaaaccttgagtgccgt
atatgttcagatcgtgcctcaggcttccactatggagtgcatgcctgtgaggggtgcaag
ggcttcttcaggagaaccatacgcctgaagctggagtacgacaaatgtgagcgccactgt
aagatccagaaaaagaaccggaacaagtgccagtactgccgtttccacaagtgcctcgcc
gtgggcatgtcccacaacgcaattcgttttgggaggatgccacagtctgagaagcttaag
ctcagagcagagctgcagatccctgagaaagaagagagaaagacgcagctggatgactgg
aagactctggccagccaaatccacgaggcctatcttaaacagttccacctgaacaaggct
aaagcacgaggctttctcactggcaagaccaacatgccaccatttgtcattcatgacctg
gacacactacagcaggcacagcctgttctggtcacccagatgctgagtgagggaagggag
gactttccacttaatgttcaggggcaggagactgaggatcgcctcttccactgctgtcaa
tacatctcggttgaaacagtcacgcagcttaccgagtttgccaaggctgtgcccggcttc
cccagcctcgacctaaatgaccaggtgacactgttgaagtatggtgtgcatgaagctttc
tttgcccttctggcctcatgcatgaacaaggacgggatgctggtgacacggggcagtggc
tttattacccgtgaattccttaagagcctccgcaagcctttcagtgatatgatagagtcc
aagttccagttcgccatgcgcttcaacgctctggagctagatgacagtgacctggcactg
tttgtggctgccataatctgctgtggagaccgaccaggactaggaaacgtgtcacatgtc
gaatgcattcaagaaagtatcattcatgctctgaggctccacctgcagaccaaccaccct
gatgacaccttgctcttccccaaactccttcagaaacttgctgaccttcggcagctcgta
acggagcatgcacagttagtccaggacattaaagaaacacaggacgcgtctctccatcca
ctactacaggaaatttataaggatatgtactga
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