Ictalurus punctatus (channel catfish): 108279947
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Entry
108279947 CDS
T04658
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108279947
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108279947
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108279947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-rbx1
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108279947
NCBI-ProteinID:
XP_017350119
Ensembl:
ENSIPUG00000016956
UniProt:
A0A2D0T5E4
LinkDB
All DBs
Position
19:complement(18320310..18337006)
Genome browser
AA seq
459 aa
AA seq
DB search
MAEAAAAAASIAAPAITTGGWTKNVTCRYFMHGLCKEGDNCRYSHDQSSSKPAMICKFFQ
KGCCAFGDRCRYEHTKPAKQEELPGPMPSVPLPAAPLTPAGDSGPIPSEPAGTSKAQERP
HSSGGVDWVNAAEFVPGQPYCGRAELSPPSPALSADPVIVNGPGPLIEDEYEKEQTNKEL
KKQLCPYAAVGECRYGVNCAYLHGDVCDMCGLQALHPSDTAQRSQHIRACIEAHEKDMEI
SFAIQRSKDMMCGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIK
SCPECRITSNFVIPSEYWVEDKEEKQNLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYK
HAFPDGRLEEPQPPSQNQRRQNGSNARNRSSRRTPLWDLFDERESSDFLDNDDEEMVTFE
LSEMLLMLLAAGTDDDVTDSEDEWDLFHEELDDYYELYL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcggcggcagcgtctatcgcggctccggcaataacaacgggaggc
tggacgaaaaacgttacttgcaggtatttcatgcacggtctttgcaaagagggagacaac
tgtcgatactcgcatgaccaaagcagcagcaagccagccatgatctgcaagttcttccag
aaaggatgctgcgcgtttggagaccgttgcaggtatgaacacaccaaaccagccaagcaa
gaggagctccccggccccatgccttcagtgccgcttcctgctgccccccttacccctgct
ggtgactctgggcccattcccagtgagccagctggcacatccaaagcccaggaaaggcct
cacagctccgggggagtggactgggtcaatgccgcagagtttgtaccaggccagccctac
tgtggaagggctgaactatctcctccttcccctgcactctcagcagatcctgtgattgtg
aatggtccagggcctctcatcgaggacgagtatgaaaaagaacaaaccaacaaagagctg
aagaagcagctgtgtccatacgcagctgtcggtgagtgccgctatggcgtcaactgcgcc
tatctgcacggggacgtgtgtgacatgtgcggcctgcaggcgctccatccgtctgacact
gctcagcgctctcagcacatcagagcatgcatcgaggcccacgagaaggacatggagatc
tcgttcgccatccagcgcagtaaggacatgatgtgcggcgtgtgcatggaggtggtgttc
gagaaggccaatcccagcgagcgtcgcttcggcatcctctccaactgcaaccactgttac
tgcctcaagtgcatccgcaagtggaggagtgccaagcagtttgagagcaagatcataaag
tcctgccccgagtgtcgaatcacgtccaactttgtcatcccaagcgagtactgggtggag
gacaaggaggaaaagcagaatctcattcagaagtacaaggatggcatggggagtaagccc
tgtcgatattttgacgagggtcgtggaacttgtccatttggagctaattgcttctacaag
catgccttccctgatggacgcctcgaggaacctcagcctccatcccagaaccagcgaagg
cagaacggctccaatgcgaggaacaggagctcaaggcgcacgccgctctgggatctgttc
gacgagcgggaaagcagcgatttcttggacaacgacgacgaggagatggttacgtttgag
ctgagcgagatgctccttatgcttctggcggcaggaaccgatgacgacgtcaccgattcc
gaagatgagtgggacttatttcacgaagagctggatgattactatgagctctacctatag
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