Ictalurus punctatus (channel catfish): 108280039
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Entry
108280039 CDS
T04658
Name
(RefSeq) transport and Golgi organization protein 1 homolog isoform X1
KO
K23704
transport and golgi organization protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108280039
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108280039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
Crescentin
KELK
UPF0242
SH3_9
Motif
Other DBs
NCBI-GeneID:
108280039
NCBI-ProteinID:
XP_017350273
Ensembl:
ENSIPUG00000002203
UniProt:
A0A2D0T5U6
LinkDB
All DBs
Position
2:11177778..11201987
Genome browser
AA seq
1947 aa
AA seq
DB search
MTGINSPFNLFILFICICLSKTSPDRRFSEFKRCADDECSMLLCRGKASQDFAGPDCRFL
SFKKGETIYVYYKLSGQRSDVWAGSVGNSFGYFPKDFLNINHVYTEKEIEVRAEETDFVC
FDTGLDKFKSYDIDVLLRNSFLNEVDEPSDQTENVLDTLSEDADKGGETENASGDVVNSD
SLHTESEAEHRVDTEDDGELPASEAAQLRLETAASYERDKDSYVFSDTGEDVKKSVVDDS
DPEQAIDKDMPDEPSPKDVGVLQESDHTTRVEAFSKLETTLGRTFDAVTSDDENTQKVTP
YDDEDQSNDLVEQPGEIEEESVKEPSLISFDEKPQYIEDNVPDAAESEDEHAPFQKEEIS
LSEDAAKDGETEETIRDVVNADSFPTGSEAEHRVDTEDDGDLRDSETAQLPLETTTSYEK
DKYSYDVKKIADGDSDPEQAIDKDMPDEPSLKDVGVLQESDHTTRVEAFSKLKTTLGTTF
DAVTSDDENTQKVTPYDDEDQSNDLVKQPGEVEEESVKEPSLISFDEKPRYFEDNIPDAT
ESEDEHAPFQPSASVEATTDDNMWSTLGDKVFKIVSGGERTGVSDGGDDDDDDDDDDDDD
DDDDDDEEEEDETHSKTTEKGSDELQSSLVPDSDTSEVADEMKPSINDSVMNSLSDNKYA
EVQEQNEDKELEEIKDKFLDPDETFIDAVESEYDPPASPLEDVKPVFDKPIEKNILKPIP
SEIEPDKSEVLFKEGAQSVPELDKQTDEQIDTVKKEIINLFKETLRTETSQPDIDEEVEE
EEVEQLLEDENAILSTKTEFTDKAEELEESIQNTNLETQLEKNELTTPKQPHDNNTLEQT
NENTSEQINHDEKTGMETLLDISVSSPDNEIDSNGADKLRKDSALSDELEYSDSVRRLTL
LREHFKDKEIKRILRHLSIKDLYKVEAMFTHLDDQLKSARQSYSENTEGLEHALESIVEV
TENAILDEVDKMLDAREQRAQVLGHKIDQVMIDEEAAVLDDFQEFAFYLHQKYSTSIMLE
KESQSHFEMAENVSEEVENPVETIPLTEVTETPEVHQEASELFNANSQEDESRSKDVGPG
EDGGHFNKNEDIQAAFQDTSEIQRGPQAILENPSDILGFEIDPSSDSLDSSRASDFTDNN
ANYDQASTSTSDHARDFFLLASEFLGVYAEILLAALPEEWQPGPTFHGLPWKPVVVTAVV
GVLTVLVFMWRTVLAVKNRMYLLTEKQLAERIQQLISEKSDVLNKVTELNNAIKQYEEKL
NNSEESRCSLQKEFSELKTHYQHLNNQKEKLSVNFANICEKIANTQEQNKSLNEKISTMH
EGIKKYQKTLKVYDEERSKVHVLMDEAKLREDALKAQVLSFEKDNCALKEQKKSLLQDAK
DWQEKHEKLSEEIKVYHKTQTELENALVHKENEIDVLSGCIAELKSLESFNDTELENDKN
GDPLKSHLKQMMDVSRIKATLSVIEDERNRWFENFMGEQKARQELEEKFQKVVHDQTNLK
SEKTHLENQYKNLQQRLEITTELYHQKENILHQKLTQEELERHEKETKLSEVDGRALQAE
EELNRLRQKVKDMQEELQQNERSLKAEIAVQEKKAHENWLKARASERALIEEKRECANLR
QKIVECSDKMSDLEHALYKSGPLDRHMPPLQRGDSYGPSPVSGGAPSPPLMIEDPSRPPS
GPVGRRGEPFGPRLLMDGHSRSADLGHPLPFRPELSVPRTSSPCTQDGSQIAPIDAKAEV
TMQASTDPTEAISKSQRQGSFLPSPIRESPVTASNPLPKAYAPQPMGGPFPPLNGPLPPM
MRPPNGHSPMIPPGPPFGPDTCFRPPHMDSYRPPLPLRPYGPIPPPFVHGPPLRDFPSMG
PRPTPHGMHDFPPNFAGPQDLPFPPRLFPSGPLPPPGAMVPPTAGAHGPAPPTPLQNRDG
QEMPHATDVPPEQRVAQDAPTPAVTQC
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgactggaatcaattcaccttttaatctttttattctatttatctgcatatgtttgtca
aaaacgtcgccagaccggcggttctctgagtttaaaagatgcgcagatgacgaatgtagc
atgctgctttgtcgggggaaagcctcacaggacttcgctggtccagactgccgttttctg
tcctttaaaaagggagagactatatatgtgtactataaactctcgggacagaggtcagat
gtttgggctggaagtgttggtaacagctttggctatttcccaaaggattttctgaacatt
aatcacgtatatacagaaaaagaaatagaagtacgtgctgaggaaacggactttgtctgc
tttgacactggactagataaatttaaaagctatgatattgatgtcctgttaagaaactcg
ttcttaaatgaggttgatgaaccgagcgaccaaacggaaaacgttctggacaccctcagt
gaggatgccgataaaggcggagagacggaaaacgctagcggggacgttgtaaattcggat
tcgttgcatacagaaagtgaagctgaacacagagttgacacagaagatgatggggaattg
cctgcttctgaagctgctcaactgcgattggaaacagcagcttcatatgaaagggataaa
gacagttatgttttcagtgacactggtgaagatgttaaaaagagtgttgtggatgattct
gatccagagcaagcaatagacaaagacatgccagatgagccttcacctaaggatgttggc
gttttacaggaaagtgaccatacaacacgagtagaagccttttccaagttagaaactact
ttaggcagaacttttgacgctgttacctcagatgatgaaaacacacagaaggtaaccccc
tatgatgatgaagatcagagcaatgacttggtcgagcaaccaggtgaaatagaagaggaa
agtgtgaaagagccttcactgatatcttttgacgagaagccccaatatattgaggacaat
gttcctgatgcagctgagtcagaagatgaacacgctccatttcagaaagaagaaatatct
ctcagtgaggatgctgctaaggatggagagacggaagaaactatcagggacgttgtaaat
gcagactcgtttcctacaggaagtgaagctgaacacagagttgacacagaagatgatggt
gatttgcgagattctgaaactgcccaactgccattggaaacaacgacttcatatgaaaag
gataaatacagttatgacgttaaaaagattgctgatggtgattctgatccagagcaagca
atagacaaagacatgccagatgagccttcacttaaggatgttggcgttttacaggaaagt
gaccatacaacacgagtagaagccttttccaagttaaaaactactttaggcacaactttt
gacgctgttacctcagatgatgaaaacacacagaaggtaaccccctatgatgatgaagat
cagagcaatgacttggtcaagcaaccaggtgaagtagaagaggaaagtgtgaaagagcct
tctctgatatcttttgacgagaagccccgatattttgaggacaacattcctgatgcaacc
gagtcagaagatgaacacgctccatttcagccttcggcctcagttgaggcaacaacggat
gacaacatgtggtctactttaggggacaaggtttttaaaattgtaagtggaggtgagagg
acgggtgtatctgatggcggcgatgacgacgatgacgacgatgatgatgatgatgatgat
gacgacgacgatgatgatgaggaggaggaggatgaaactcactctaaaacaactgaaaaa
ggttcagatgagcttcagtccagtttggttcctgactcagatacaagtgaagtagcagat
gaaatgaaaccctccattaacgactctgtaatgaattcattaagtgacaacaaatatgct
gaagtacaggaacaaaatgaggataaagaattagaagagattaaggacaagtttttagat
ccggatgagacctttattgatgctgttgaatctgaatatgatcctccagcatcaccgtta
gaagatgtaaagccagtgttcgacaaacccatcgaaaaaaatattttgaagccaatcccc
agtgaaatagagccagacaaatctgaggttctcttcaaggaaggtgctcagagtgtacct
gagcttgataaacagacagatgaacaaatagacacagttaaaaaagagattatcaattta
tttaaagagacactgagaacagaaacaagtcaacctgacattgatgaggaggtagaggaa
gaggaagttgagcagctgctagaggatgaaaatgctatattgtccactaaaacagagttc
actgataaagctgaggagctagaagaatccattcaaaacaccaaccttgaaacacagtta
gaaaaaaatgaattaaccacgcctaaacagccacatgacaacaacacactcgaacaaaca
aatgagaacacatcagaacagataaaccatgatgagaaaactggcatggagacattgttg
gacatctcagtctcctcacctgataatgaaatcgacagtaatggtgcagataaacttcgg
aaggattctgccctcagtgacgagctggagtacagtgacagtgtgcggagactcacgctt
ttaagagagcactttaaggacaaagagatcaagcgcattttgcggcaccttagcattaaa
gacctttacaaggttgaagcgatgttcactcatttggatgatcaactgaagtctgccagg
cagtcttactcagagaatactgagggcctggagcatgcactggagagtatcgtagaggtt
acagaaaatgccatacttgatgaggttgacaaaatgctggatgctcgggagcagagggca
caggtccttggacacaagattgaccaagtcatgattgacgaggaagctgctgttttggat
gactttcaggagtttgctttttatctgcatcagaaatacagtaccagcatcatgttagag
aaggagagccagtcacactttgaaatggcagagaacgtgtccgaagaggtggaaaatcca
gtggaaaccatcccattgaccgaggtaactgaaactccagaggttcatcaagaagccagt
gaattgttcaatgcgaacagtcaggaagacgaatcccgtagcaaggacgtggggcctggt
gaagatggtgggcatttcaataaaaatgaagacattcaagcagcctttcaagacacatca
gagattcagagaggaccacaagctattctggagaatccttcagatatattaggatttgaa
attgatccatcttcagattctttggactcttcacgggcttctgattttactgacaataac
gcaaactatgaccaagcgagcacatcgacctcggatcatgctagggacttctttcttctt
gcatctgaatttcttggcgtgtatgcagaaatactgttggctgctttgcctgaggaatgg
cagccgggtcctacgttccatgggctgccctggaagcctgtggtggttacagctgtggtg
ggagttctcactgtgctcgtgttcatgtggaggaccgttctcgctgtcaaaaacaggatg
tatctcttaactgaaaagcaacttgcagagaggattcagcagcttatcagtgagaaatcg
gatgtcctcaacaaagtaactgaactgaacaatgcgatcaagcaatatgaggaaaagctg
aataattcagaagagtcacgatgttcactacagaaggagtttagtgaactcaagacacat
taccaacatctcaacaaccagaaggagaaactgagcgttaattttgctaatatctgtgaa
aaaattgcaaatacacaggaacagaacaaatccctgaatgagaagatatccacaatgcat
gagggaattaagaagtatcagaaaaccctgaaagtatatgacgaggagcgctcaaaggtt
catgtcctcatggatgaagctaaactcagagaagatgccttgaaagctcaggtgctgtca
tttgaaaaggacaattgtgccttgaaagagcagaagaaatctctgttgcaagatgccaaa
gactggcaggagaagcatgaaaaattgagtgaggaaatcaaagtttaccataaaacacaa
acggagctggagaatgccctcgtgcacaaagaaaacgaaatcgatgttctctctggatgc
attgctgaattgaagagccttgagtcatttaatgatacagagctggagaatgacaagaat
ggtgatccactgaagtcgcacctcaaacagatgatggatgtctcaaggatcaaggctacg
ctttcagtcatcgaggatgagcgaaatcgctggtttgaaaacttcatgggtgaacagaaa
gcaagacaagaacttgaagagaaatttcagaaggttgttcatgaccaaacgaatctgaaa
agtgagaaaacccatctggaaaaccagtacaagaacctccaacagagactagaaattaca
actgaattgtaccaccagaaagaaaatatcttacaccagaagttgactcaggaagagctg
gagcgccacgaaaaggaaaccaagctgtctgaggtggatggccgagccttgcaagctgaa
gaggaactgaaccgcctcaggcagaaagtgaaggacatgcaggaagaattgcagcaaaat
gagagatctcttaaggctgagattgctgttcaggaaaagaaagcccatgagaactggtta
aaggcccgtgcttctgaacgagccttgatagaagagaagagagagtgtgctaatctgcgt
cagaagattgtggaatgtagtgacaaaatgtccgatttagagcacgcactgtacaagtct
ggtcctctagaccgtcacatgcctcctctacagagaggggattcatacgggccttctcct
gtgagtggtggtgctccttcccctcctttaatgatagaagatccttcacgtcctccgtct
ggtcctgtgggacgaaggggtgagccttttgggccgagactgctcatggatggccatagc
cgttcggctgacctcggacatccgctgccgtttcgaccagaactgtctgtcccccgtacc
tcatctccttgcacacaggatggatctcaaatagctccaatagatgcaaaggctgaggtc
acaatgcaggcctccactgatcctacagaggcaatctccaagtcccagagacagggatca
tttctcccatctcctatcagggaatctcctgtcacagcttcaaatcctcttccaaaggct
tatgctccccaaccaatgggtggaccatttcctccactgaatggaccacttcctccaatg
atgcgaccgcccaatggccattcacccatgattcctcctgggcctccatttggacccgac
acctgtttcaggccaccccacatggactcctacagaccccctcttcctttgcgcccatat
ggacccatccctccaccctttgttcatggtccacctctgagggacttcccttccatgggt
ccacgtccaacaccgcacggcatgcatgacttcccgcctaattttgccggacctcaagac
ttgcctttcccaccccggctcttcccttctgggcctttgccaccccctggcgccatggtt
ccacccacagctggtgcccatggaccagctccacctacacctctgcagaatagggatggc
caagagatgccacatgccacagatgtaccacccgagcagagggttgcacaggatgctcca
acacctgcagtaacacaatgttga
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