KEGG   Ictalurus punctatus (channel catfish): 108280269
Entry
108280269         CDS       T04658                                 
Name
(RefSeq) period circadian protein homolog 2 isoform X1
  KO
K02633  period circadian protein 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108280269
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108280269
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 108280269
NCBI-ProteinID: XP_053544539
UniProt: A0A9F7RKC2
LinkDB
Position
20:426139..439115
AA seq 1317 aa
MSGESELKSYLSGGGSEEEEESGSPCGTMSHLHKMGGASDGSDSGNDPPTSQRSRPPLHE
DMEMGGSGSSGSGTESHGNESHGNESVGSSSGNSKDSALLVSSASNKSSNSQSPSPPSSS
NAYSLVSSEQDNPSTSGCSSEQSAKAKTQKELFKTLKNLKLHLPAEKRSKGRASTLHTLR
YALRCVKQVKANEEYYQMLMINDSQPPGLDVSSYTIDELNSITSEYTLKNTDIFAVAVSL
ITGKMVYISEQAAAILHCSKDEFKDRKFVEFLTPQDVSVFYSFTTPYRLPSWSMCTGAES
SAADFVQEKSFFCRISGEKEKEGDLQYYPFRMTPYLMKVQEPELSEEHFCCLLLAERVHS
GYEAPRIPPDKRIFTTTHTPNCVFQDVDERAVPLLGYLPQDLIGSHILLHLHPEDRPLML
AVHRKIVQYVGQPFDHSSMRFCTRNGEYVTIDTSWSSFVSPWSRKVSFVIGRHKVRMGPV
NEDVFSAPTFTEGKIMDSDIQEISEQIHKILLQPVHCMGSSGYGSHGSNSSHDHLTTPSE
SNSNSNTTEETNKSKPRSFQEICKGVQLLKTQDQQASTSKADQKKGTERECMSRLKCPGV
KQKDTPVVRGGTAAVEELQDQTLYSYQQISCLDSVIRYLESCNTSVTPKRKYQFSSNTTS
SNSDEEKKACAGAMSSPQVGLLKTNKKSPSDVVGGALAPLALPTKAESVVSITSQCSYSS
TIVHVGDKKPQPESEIIEDVAESPTPPVPVSLMTPPTAEQGPYRKLGLTKQVLAAHTQKE
EQAFLSRCRDRSLTSLQKTYSDRSQRDGGHGNHAPSSAKPGTSGADPTTKKSGRTRKSKK
PRIRKPESSDSAVSQRRLRPPLQGLNQTSWSPSEASQSAFSVPYPAMIPGYNFYPATLPP
AGDRGSDARTTQAPPTAPQFPAPVVTPMVAFVLPSYMFPQLGMSASPPFYPEQQPGVGAQ
QPNYNPQNPLQPQQTQPNYTTQQPFQPQQDYTVPQAFMPQHVYVTQNPFQPQAPFQPPQP
FQMQFTPQTPLPYQMTSDPRLPVPESAEVPSPSPLSCSPPLFGSHCSSPLQLDLLQLEDK
ADSHSTTPLSGARGNCSSAQEKSSSTADVQQPCCVEDGGPSDALSSSSELMDLLMQEDSG
SATSASTGSASNGCNTSNSGAGSSKYFGSVDSSEQEHKEKRKEDGQNFKYVLQDPLWLLM
ANTDQNVMMTYQVPSRDMEKVLREDRERLRQLQKNQPRFTSDQRRELREQHQWMRRGGLP
KAINIKECLYCENDAGAPLEDDLPEMELGVLGGEALAEEGVSHIQEEEEHVLLDCVS
NT seq 3954 nt   +upstreamnt  +downstreamnt
atgtcaggtgagtctgagctgaagtcgtacctgtcagggggcgggtctgaagaggaggag
gagagcgggtctccctgcggcaccatgtctcatctgcacaaaatgggcggagcatcagat
gggagcgacagtggaaacgacccacccacctcccagagatcccgcccaccgcttcatgag
gacatggagatgggcgggagcggctcgagcgggagtggcacggaatcccatggcaacgag
tcgcatggcaacgaatctgtaggaagttcaagcggcaacagcaaagactcggctctgtta
gtatcatcagccagcaacaagagttcgaactctcagagtccgtctccacccagcagctcc
aatgcctacagcctggtgagctcagagcaggacaacccatccaccagcggctgcagcagt
gagcagtctgcgaaagccaaaactcagaaggagctctttaagaccctgaagaacctgaag
ctccacctgcctgctgagaaacgcagtaaaggtcgagcgagcacattacacacactccgt
tacgcactgcgctgcgtcaaacaggttaaagctaatgaggaatattatcagatgttgatg
ataaacgacagccagccgccaggtctggacgtttcctcctacaccatcgacgagctcaac
agtatcacgtctgaatacacactcaaaaacacagatatcttcgccgtagccgtgtccctg
atcacggggaagatggtgtatatatcggagcaggcggcggcgatcctgcactgcagtaag
gacgagtttaaggacaggaagtttgtggagtttctgacgccgcaggatgtgagtgtgttc
tacagcttcaccactccgtacagactgccctcatggagcatgtgcaccggggcggaatca
tcagctgcagattttgttcaggagaaatctttcttctgcagaatcagcggtgagaaggag
aaggagggggatcttcagtattacccgttcaggatgactccgtatctgatgaaggttcag
gaaccagaactgtcagaggaacatttctgctgcctcttgctggctgagagagtacactcc
ggatatgaggcacccagaatcccaccagacaaaaggatcttcactacgacacacacccca
aactgtgtgttccaggatgttgacgagagggcggtgcctctgttagggtatcttccacag
gacctgattgggtcccacattcttcttcaccttcaccctgaagacagaccactgatgctg
gctgtgcatcgcaagattgtgcagtatgtgggtcagccgtttgatcactcctccatgcgc
ttctgcacgaggaatggtgaatatgttaccatagataccagctggtctagtttcgtcagc
ccctggagtcgcaaagtgtccttcgtcatcggaagacacaaagtgcgcatgggccctgtg
aacgaggatgtgttttcagctcctactttcacagagggaaaaatcatggactcggacatc
caggaaatctcagagcagatacataaaatcctgctgcagcctgtacactgcatgggctcc
agcggttacgggagtcatggcagcaacagttcccatgaccacctgaccacacccagtgaa
agcaatagcaacagcaacaccaccgaggagaccaacaagagcaaaccgaggtcattccag
gagatctgtaaaggtgttcagctgctgaagacgcaggatcagcaggcctccacttctaaa
gcagaccagaagaaaggcacagagcgtgagtgcatgtcaagattaaagtgtccaggagtg
aagcagaaagacaccccagtggtaagaggtggtactgcagccgtggaggagctccaggac
caaaccttatactcctaccagcaaattagctgcctggatagtgtgatcagatatttggag
agctgtaacacgtctgtcacgccgaaaaggaagtaccagttctcctccaacacgacctcc
tctaactctgacgaagagaagaaagcgtgtgccggggcgatgtccagcccacaagtaggt
cttttgaagaccaataagaagtctccatctgatgtagtgggtggggctttggctcctttg
gctctgcccactaaagcagagagtgttgtatccatcacatctcagtgttcttacagcagc
actattgtacacgtgggggacaagaaaccacagccagagtcagagatcattgaggatgtt
gctgaaagccccacccctcctgtgccagtaagtctgatgactccgcccacagccgagcag
ggaccctataggaaactgggcctgaccaaacaggtgttggcggctcacacgcagaaggag
gagcaggcgtttctgagtcgctgcagagaccggagtctcacatcgctgcagaaaacctat
tcggaccgctcccagagggacggggggcacggtaaccacgcgccatcttctgccaaaccc
ggcacatccggggcagatccgaccaccaaaaagagcggccggaccagaaagtcaaagaaa
ccacggataagaaaacccgaatcgtcggacagcgccgtctctcagcgcaggctccgccca
cctcttcagggactgaaccagacatcatggtcgccatcggaggcatctcagtctgcgttc
tcagtgccataccccgccatgattcccggttacaatttttacccggctacactgccccct
gctggtgaccgcggttcagatgcccgaaccactcaggctccgcccactgctccccaattc
ccagccccagtggtcacaccgatggtggcatttgttttacccagctatatgttccctcag
ctcggcatgtcagcaagcccacctttctaccccgagcagcagccaggtgtcggtgctcag
cagccgaactacaacccccagaatcccttgcaacctcagcaaacacaaccaaactacact
acccaacagcctttccagcctcaacaagactacactgtcccgcaagcatttatgccccaa
cacgtctacgttacccagaatccttttcaaccccaagctccatttcaacccccacagcca
ttccagatgcagttcactccacagacaccactcccataccagatgacctctgaccccagg
cttcctgttcccgaatcggccgaggtcccttccccgtctcctctctcttgctctccgccg
ctgttcgggtctcactgcagctctccgttacagctggacctgctgcagctggaggacaaa
gcggactcgcacagcacgacgccactgtcaggtgcccgggggaactgcagctcggcgcag
gagaaaagtagcagcactgcagacgtgcagcagccgtgttgtgttgaagacggaggtccg
agtgacgctctctcctcgtccagtgagctgatggatctgctgatgcaggaggactctgga
tcggccacgtctgcatccacaggctccgcctccaacggctgcaacacctccaacagtggc
gcagggagcagcaaatatttcgggagcgtggactcttctgagcaagagcacaaggagaaa
aggaaagaagacggacaaaacttcaaatatgtcctccaggatcctctctggctgctgatg
gccaacaccgaccagaacgtcatgatgacctatcaggtgccgtcacgggacatggagaag
gtgttacgggaagatcgagagcgtttgcggcagctgcagaagaaccagccacgtttcact
tcagatcagaggcgagagctccgagagcagcaccagtggatgagacgaggtggtttacct
aaagccatcaacatcaaggagtgtctgtactgtgagaacgatgccggcgctccgttagaa
gatgatctgcctgaaatggaactcggcgttctgggaggagaggcgttggcagaagagggc
gtgtctcacatacaggaagaggaggagcatgtcttattagactgtgtttcctag

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