KEGG   Ictalurus punctatus (channel catfish): 108280796
Entry
108280796         CDS       T04658                                 
Symbol
calr3b
Name
(RefSeq) calreticulin 3b
  KO
K08057  calreticulin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04141  Protein processing in endoplasmic reticulum
ipu04145  Phagosome
ipu04148  Efferocytosis
ipu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108280796 (calr3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108280796 (calr3b)
   04148 Efferocytosis
    108280796 (calr3b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108280796 (calr3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ipu03110]
    108280796 (calr3b)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ipu04091]
    108280796 (calr3b)
Chaperones and folding catalysts [BR:ipu03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   108280796 (calr3b)
Lectins [BR:ipu04091]
 Calnexin / calreticulin
  108280796 (calr3b)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 108280796
NCBI-ProteinID: XP_017351704
Ensembl: ENSIPUG00000005374
UniProt: W5U902
LinkDB
Position
20:20289796..20294839
AA seq 424 aa
MQSFKVFTIFSAALLAFSVDATVYFKEQFLDGDAWTSRWVNSEHKSDYGQFKLTAGDFYG
DAEKDKGLQTSQDARFYATSARFEPFSNEGKSLVVQFTVKHEQKIDCGGGYVKVFPADLN
QADLHGDSQYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKDIKCKDDELTHLYTLILNP
DQTYEVKIDNEKVESGSLEEDWDFLPPKKIKDPEAKKPEDWDDRAKIDDETDTKPEDWDK
PENIPDPDAKKPEDWDEDMDGEWEPPMIPNPEYKGEWKPKQIDNPNYKGIWEHPEIDNPE
YSPDSEIYKFDNIGVIGLDLWQVKSGTIFDNFLIADDAKEAEEFGKNTWGVTKGPEKKMK
DEQDEKKRKEEDEKNKEQDTTTDDDDDSDNDDDDDNDEEEGKEETTEEPDVEGEEDDAQP
KDEL
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgcaaagctttaaggtgtttacgatattttcagcagcgctgttggcgttttcagtcgac
gcaacggtttactttaaagagcaattcctcgacggagatgcgtggacgagtcggtgggtg
aactccgaacacaaatctgactacggacagtttaaacttactgctggagacttctacggt
gatgcagagaaagacaaaggtttgcaaaccagccaggatgcccgcttctatgctacgtct
gcacggttcgagccgttcagcaacgagggcaaaagcctggtggtccagttcactgtgaaa
cacgagcagaagatcgattgtgggggcggctacgtgaaagtcttccctgctgacctcaat
caggctgatctgcatggagactcgcagtactacatcatgttcggtccagatatctgtggt
tacagcacaaaaaaggtccatgtcatctttaactataaaggcaagaaccacctcatcaag
aaagacatcaagtgtaaagacgatgagctgacacacctctacacgctgattctgaaccca
gaccagacctacgaggtaaagatcgacaacgagaaggtggagtctggctccctggaagag
gactgggactttctgcctcctaagaagatcaaggaccctgaagccaagaagcctgaggat
tgggacgatcgtgccaagatcgatgacgagacggacaccaagcccgaggactgggacaaa
cctgagaatattccagatcctgatgccaagaagcctgaagactgggatgaagatatggat
ggtgaatgggagcctcccatgatccccaacccagaatacaagggagagtggaaaccgaag
cagattgataaccccaactacaaaggaatctgggagcaccctgagatcgacaaccccgag
tacagccctgactctgagatctataagtttgacaacatcggagttattgggctggatctg
tggcaggtcaagtccgggaccattttcgacaacttcctgattgcagatgatgcaaaagaa
gcagaggagtttggaaaaaatacatggggtgttactaagggtccagagaagaaaatgaaa
gatgagcaagatgaaaagaaacgcaaagaggaagacgaaaagaataaggagcaggacacc
acgacggatgatgacgacgacagcgataacgatgacgacgacgacaacgatgaggaggag
ggaaaggaggagacaacggaggagcctgacgtagagggagaggaggatgatgctcagcca
aaagatgaattataa

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