Ictalurus punctatus (channel catfish): 108280796
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Entry
108280796 CDS
T04658
Symbol
calr3b
Name
(RefSeq) calreticulin 3b
KO
K08057
calreticulin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108280796 (calr3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108280796 (calr3b)
04148 Efferocytosis
108280796 (calr3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108280796 (calr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108280796 (calr3b)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ipu04091
]
108280796 (calr3b)
Chaperones and folding catalysts [BR:
ipu03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108280796 (calr3b)
Lectins [BR:
ipu04091
]
Calnexin / calreticulin
108280796 (calr3b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
108280796
NCBI-ProteinID:
XP_017351704
Ensembl:
ENSIPUG00000005374
UniProt:
W5U902
LinkDB
All DBs
Position
20:20289796..20294839
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AA seq
424 aa
AA seq
DB search
MQSFKVFTIFSAALLAFSVDATVYFKEQFLDGDAWTSRWVNSEHKSDYGQFKLTAGDFYG
DAEKDKGLQTSQDARFYATSARFEPFSNEGKSLVVQFTVKHEQKIDCGGGYVKVFPADLN
QADLHGDSQYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKDIKCKDDELTHLYTLILNP
DQTYEVKIDNEKVESGSLEEDWDFLPPKKIKDPEAKKPEDWDDRAKIDDETDTKPEDWDK
PENIPDPDAKKPEDWDEDMDGEWEPPMIPNPEYKGEWKPKQIDNPNYKGIWEHPEIDNPE
YSPDSEIYKFDNIGVIGLDLWQVKSGTIFDNFLIADDAKEAEEFGKNTWGVTKGPEKKMK
DEQDEKKRKEEDEKNKEQDTTTDDDDDSDNDDDDDNDEEEGKEETTEEPDVEGEEDDAQP
KDEL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctttaaggtgtttacgatattttcagcagcgctgttggcgttttcagtcgac
gcaacggtttactttaaagagcaattcctcgacggagatgcgtggacgagtcggtgggtg
aactccgaacacaaatctgactacggacagtttaaacttactgctggagacttctacggt
gatgcagagaaagacaaaggtttgcaaaccagccaggatgcccgcttctatgctacgtct
gcacggttcgagccgttcagcaacgagggcaaaagcctggtggtccagttcactgtgaaa
cacgagcagaagatcgattgtgggggcggctacgtgaaagtcttccctgctgacctcaat
caggctgatctgcatggagactcgcagtactacatcatgttcggtccagatatctgtggt
tacagcacaaaaaaggtccatgtcatctttaactataaaggcaagaaccacctcatcaag
aaagacatcaagtgtaaagacgatgagctgacacacctctacacgctgattctgaaccca
gaccagacctacgaggtaaagatcgacaacgagaaggtggagtctggctccctggaagag
gactgggactttctgcctcctaagaagatcaaggaccctgaagccaagaagcctgaggat
tgggacgatcgtgccaagatcgatgacgagacggacaccaagcccgaggactgggacaaa
cctgagaatattccagatcctgatgccaagaagcctgaagactgggatgaagatatggat
ggtgaatgggagcctcccatgatccccaacccagaatacaagggagagtggaaaccgaag
cagattgataaccccaactacaaaggaatctgggagcaccctgagatcgacaaccccgag
tacagccctgactctgagatctataagtttgacaacatcggagttattgggctggatctg
tggcaggtcaagtccgggaccattttcgacaacttcctgattgcagatgatgcaaaagaa
gcagaggagtttggaaaaaatacatggggtgttactaagggtccagagaagaaaatgaaa
gatgagcaagatgaaaagaaacgcaaagaggaagacgaaaagaataaggagcaggacacc
acgacggatgatgacgacgacagcgataacgatgacgacgacgacaacgatgaggaggag
ggaaaggaggagacaacggaggagcctgacgtagagggagaggaggatgatgctcagcca
aaagatgaattataa
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