Ictalurus punctatus (channel catfish): 124625929
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Entry
124625929 CDS
T04658
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
124625929 (zgc:173742)
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124625929 (zgc:173742)
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Topoisomerases
124625929 (zgc:173742)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
124625929
NCBI-ProteinID:
XP_047008759
UniProt:
A0A979EKU4
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Position
4:complement(9400432..9457877)
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AA seq
742 aa
AA seq
DB search
MPQEDKVKKVKVKKTKAAVLSDDLSSGDTHLEFKKVKAETSEKAQQKQKGTKQHKVKSPK
KERTDFEIADDKRLKQEASDGDFMPEKKGKKRKRKLESVEGPSSSSAPSLPKKKKKSPQE
AEGCSGLEKKKRKSEAKNKKVKKEEKEERPVTAKKKTKEEIEAARALKIKKKEEEEQQRW
RWWEEEKYEDGVKWRFLEHKGPYFPPEYQPLPDNVKFYYDGKPVKLSLAAEEAALFFAQM
LDHEYTTKDVFRDNFFKDWRKEMTLEERMLITDLNKCDFGELHAMHKEKVEARKNMSKED
KLVIKQANQKILEEYGYCMLDHHRERIGNFKIEPPALFRGRGEHPKQGMLKKRIQPEDVI
INCSRDSRIPEPPAGHSWKEVRHDNTVTWLASWTENVQGSCKYIMLNANSKLKGEKDWEK
YEVARKLKTCVNAIRAQYQEDLKSKHMGTRQRAVALYFIDKLALRAGNEKEEGETADTVG
CCSLRVEHITLHDTLDGEKCVVEFDFLGKDCIRYYNKVPVSKRVFKNLKLFMQNKQDGDD
LFDRLNTAMLNKHLSSLMPGLTAKVFRTYNASMTLQQQLKELSNSSDNPAEKLLSYNRAN
RAVAVLCNHQRAPPKTFEQSMANLQAKIVSRKEQLALAKKELKQAKKEAKRSSDSKLLVV
VEKKKKAVQRSEEQLLRMEVQATDREENKQIALSTSKLNYLDPRISVAWCKNMEVPLDKI
YNKTQRDKFAWAIDMTERNFLF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagaggacaaagtgaagaaggttaaggtgaagaaaaccaaagcggcagtgctg
agtgatgacctttccagcggagacacgcacctcgaattcaagaaggtgaaggccgaaacc
agtgagaaagcccagcagaaacagaagggcacaaagcagcacaaggtcaagagtcctaaa
aaggagcgtacagactttgaaatagctgatgataaaagacttaaacaggaggcaagcgat
ggtgactttatgccagaaaagaaagggaaaaaaaggaaaagaaagctggagtcagtcgaa
ggtccttccagctccagcgcaccttctttgcctaaaaagaagaaaaaatccccgcaggag
gcagagggatgctcgggtctggagaaaaagaagagaaagtccgaagcaaaaaataagaag
gtgaagaaggaggagaaagaggagcgtcctgtcacagcgaagaagaagacgaaggaggag
atcgaggcagccagggccctcaagatcaagaagaaggaggaagaggagcagcagcgttgg
cgttggtgggaggaggagaaatatgaagacggtgtcaagtggaggtttctagagcacaag
ggcccgtatttccctcctgagtaccagccgctcccagacaacgtgaagttctactatgat
ggcaagcctgtaaagctgagcttggctgctgaggaagcggcgttgttctttgcacagatg
ctggatcacgagtacaccactaaagatgtgtttcgtgacaacttcttcaaagactggagg
aaggagatgactctggaggaaaggatgctgatcactgacctcaataagtgtgactttgga
gagttgcatgccatgcacaaggagaaagtggaggcaaggaagaacatgagcaaagaagac
aagctggttattaaacaggccaatcagaagattctggaggagtatggctactgtatgttg
gaccaccatcgggaacgcattggcaactttaagattgagcctccagcgctgttccgaggc
agaggagaacatcctaaacagggcatgctgaaaaagaggattcagccggaggacgttatc
atcaactgcagccgtgattcacggatcccagagccccctgctggtcacagctggaaagag
gtccgacatgacaacactgtgacctggttggccagctggactgagaacgtccagggttcc
tgcaaatacatcatgctcaacgcaaactccaaactcaagggagagaaggactgggagaaa
tacgaagtggctcgcaagctgaagacgtgtgtgaatgcgatccgagcccagtaccaggaa
gatctgaagtccaaacatatgggcacacggcagagagctgtagccctctatttcatcgac
aagctggctctgagagcaggtaatgaaaaggaagagggggagacggcggatacagtgggt
tgctgctccctgcgtgtcgagcacattaccttacacgacacactcgatggagagaaatgt
gtggtggagttcgacttcctgggtaaagattgcatccgttactacaacaaggttcctgtc
tcgaaaagggttttcaaaaacctcaagctttttatgcaaaacaagcaagacggagacgac
ctgtttgatcggttaaacactgcgatgttgaataagcatctgagttctctcatgccaggt
cttacagccaaggtttttaggacatacaacgcctccatgacactgcagcagcagctcaaa
gagctcagcaattcttcggataacccggcggagaagctgctgtcctataaccgagcgaac
cgtgcggttgcagttctctgtaaccatcagcgggcgccaccaaagaccttcgagcagtcc
atggccaacctgcaggctaagattgtgagtaggaaagagcagctagcgcttgctaaaaag
gagctgaagcaggctaagaaggaagccaaaaggagctcagacagcaaactgctggttgtg
gtagagaagaagaagaaggcagtgcagcgcagtgaagagcagctgctcaggatggaggtt
caggctacagaccgagaagagaacaagcagatcgccctgagcacctccaaactaaactat
ctggacccacgcatcagtgtggcctggtgcaagaacatggaggtgccactggataaaatt
tataacaagactcagagggataagtttgcctgggccattgatatgactgaacgcaacttt
ttgttttaa
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