Ictalurus punctatus (channel catfish): 124627920
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Entry
124627920 CDS
T04658
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
124627920
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124627920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124627920
NCBI-ProteinID:
XP_047010708
UniProt:
A0A2D0QV62
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Position
4:complement(6843527..6856254)
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AA seq
960 aa
AA seq
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MASLSLESPEQTENGSADESGQSEARVKEEKDSEEVSERLFETFPKSALGFSSEQVACVC
EALLQAGNVDRLWSFLATIPPSADVLRGNETLLKAQALVAFHREDFTELYAILESRDFHP
SNHGFLQDLYLRARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRN
ALKECYKVNRYPTPDEKKNLAKLTGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHST
EDEASKADLEDIADKPAAQEAGGSTASLISLSGAPCSTGGQLILNNTGGFLTSPHPLLLN
GSPLLSGTGTGVIINGLTLSDGHAVTLSPVTTNTPLLLNGAQVISKGSGNNSVPDENCIT
KIETQANLTSAVPVSLTEETNATNHNVSPLDFITVPGAMKAQDSSQMVPPSSISTSTISS
TVMTRTSLPSLALTQNGILSSAVPPSGAVISNPAMPLRSTQQPELVVVATAGSQINPTSS
ISQMASSSTVCSSQVFSLPQVVPSIQGIPVSQLVQHPAGTPVSCPQLVPVSPITTQLSQS
STPHFSTPNLQIGPRSTQAQPQNGSSALGENIVVPVPRVPNGQAPQGLTLQLIDQSTSAT
TPHIQTPLGTQGIPISSPTQVVPVSQSKDTGQPQLVPLPQFMPVSPITGAPTGTISFPQV
VPAAPSFSIPTPGGAFQILTSGSGGGVAVPQGAIRISPIGPPQSVPTAGAIPGVQLLNSG
VIQLPSASPGNFLLAGGSPFLSVQNGKLILTIPAGFQFTSMPVKSIPENPGPSASSSSGL
EHTLTGTSLQTQPVSLSSGQTSTPFQSSPLIGSSALYCSPEPGALANPTPGASPNTSDPP
TPTPTSVLPSQQTLSPESMLSFSPLSSGVASGPHLIQPAWSPVPLSSSSGLTLFDVRGKG
DLPEDAGLLGLPGGESLLLGTPPSVDDVHRESHLDEVEMDGDTKILTQLQSVPVDDDLGL
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtctccagaacaaacggagaatggaagcgccgacgagtcc
gggcaatcagaagcccgagtcaaagaggagaaggactcggaggaagtttctgagcggctg
tttgagaccttcccaaagtccgcgctcggcttttccagtgagcaggtcgcctgcgtgtgc
gaggctctcctgcaggcgggcaacgtggatcgcttgtggagcttcctggccaccatccct
ccttcggccgacgtgctacgtggcaacgagaccctgcttaaggcccaggccctggtcgcc
ttccaccgcgaggactttacagagttgtacgccatcttagagagccgcgacttccacccg
agcaaccacgggttcctgcaggacctctacctgagagcgcgctacaaggaggcggagagg
tcgcggggtcgcagtctgggcgccgtggataagtaccggctgcgcaaaaagtttcccctt
ccaaagaccatctgggacggagaggagacggtatattgtttcaaggaaaagtcgcgtaac
gccctcaaggagtgttacaaagtgaaccggtacccaactccggacgagaagaaaaatctg
gccaaacttactggactttctttgacccaagtgagcaactggttcaagaatcggcgacag
agagaccgaactccatccggtaccaacagcaaaagtgaatctgatggaaaccatagcaca
gaggatgaggctagtaaggctgatctggaggatattgctgacaaacctgctgctcaagag
gctggaggctcaactgcgtctctcatatctctctctggtgccccctgtagtactggaggt
cagctcattctcaataacacagggggattccttactagtcctcatcccctgttgctcaat
gggagcccattgctatcagggactggaactggtgtcatcattaatggactgactctgagc
gatggtcatgcagtcaccctcagtcccgtaactaccaacactccacttttactcaatggg
gctcaggttatatctaagggtagtggaaacaatagcgtcccagatgaaaactgcattacc
aaaatagaaacgcaagccaacctcactagcgcagttcctgtctcattgaccgaggaaacg
aatgcgaccaaccataatgtctctccgttggacttcattactgttccaggggctatgaag
gctcaagatagcagtcaaatggtgcctcccagctccatatccacatccacaatctcttcc
acagtgatgactcgcacctccctcccttcattagcgttgactcaaaatggcatcctttcc
tctgcagttcccccatctggtgcagttatttccaacccagcgatgcctctacgatccacc
cagcagcctgagcttgtggtggtagcaacagctggttcccaaataaaccctacatcttcg
atttcacaaatggcatcttcttccactgtctgtagctctcaggttttttctttgccccag
gtggtaccatctatccagggtattccagtatctcaattagtgcagcacccagcagggact
ccggtgtcttgccctcagttggttccagtgtcccccattactactcaactatcccagagt
tccacccctcatttttcaacccccaatctgcaaattgggcccaggtctactcaagctcaa
cctcagaatggatcctctgcacttggggagaacattgttgtgcctgtcccccgggtgcct
aatggacaggctccacaagggctgacacttcagttaatagaccagtccacgtcagccacc
accccacacatacagaccccgctgggtacacaaggcattcccatctcctcaccaacacaa
gtagttcctgtttcacagtccaaggacacagggcaaccccagctggtgcctttgccccaa
ttcatgcctgtatcccccattactggagcacctacagggaccatatccttccctcaggtg
gtcccagctgcaccctccttctccatcccaactccaggaggtgctttccaaatcttaaca
tctggctctggaggaggagttgctgtgcctcagggggctatacgtataagcccaatagga
cctcctcagagtgtgcctacagctggtgctattccaggtgtccagcttctcaattcagga
gtgattcaacttccctctgcttctccaggtaacttcctcttggcaggtggcagtccattc
ctgagtgttcagaacggcaaactcattctcaccatcccagctggtttccagtttaccagc
atgcctgtcaagtccatcccagaaaatccaggcccaagtgctagcagcagcagtggactg
gaacataccttaacaggaacgtcactacaaactcagccagtctccttatcctctggccag
acctctacaccctttcagtcatctcctttaattggctcatctgcactttactgtagtcct
gagcctggagccctggccaatccaacgccaggagcctctccaaacacctcagaccctccg
accccaaccccaactagtgtgctgccatcccaacagaccctcagcccagagagcatgctg
tcattcagtcccctcagcagtggtgtagccagtggtccccatctcattcagcctgcttgg
agtcccgtgcccctgtcatcttcatctggactcacactgtttgatgtacgtgggaaaggg
gatctacccgaggacgcaggtttattgggcttaccaggtggggagtccctgctactgggt
acccctccttcagttgatgatgtacatagggaatctcatctggacgaggtggagatggat
ggagacacaaagattcttacccaactgcagtctgtccctgtggatgatgatttgggtttg
taa
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