Ictalurus punctatus (channel catfish): 128628722
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Entry
128628722 CDS
T04658
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
Organism
ipu
Ictalurus punctatus (channel catfish)
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
LRR_1
LRR_4
PYRIN
LRR_8
DUF5891
Motif
Other DBs
NCBI-GeneID:
128628722
NCBI-ProteinID:
XP_053541281
UniProt:
A0A9F7RFK9
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Position
13:3808867..3840918
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AA seq
968 aa
AA seq
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MTSNMSVSGDQDLKKDERMMEGKRSDSPEPSCVSMKSDWSRELPYNFRDGASSPDVRPQK
KKSNISRNQLDSIFKELEHKVITLIKNELKRFRKLLSPDYPACTEREVEDEEDLHSVREG
ALKITLHILNNMNHTDLANTLHNKSVAPVCQTELKSSLREKFKRINEGISQHGSSALLNE
IYTELYITEGWSGDTNNEHEVRQIETASRRPAIQETPIKCNELFKDKSIRRVLTKGVAGI
GKTVSVQKFILDWAEGKANQDVTFMFPLPFRELNLMKQRNLSLMELLHHFFPEMRKLELL
DSYTVVLIFDGLDECRLPLNFQKNERLCDVTGSASVDVLLTNLIKGNLLPSALLWITSRP
GAANQIPPECIDQVTEVRGFSDPQKEEYFRKRISDQSLANKIITRMKSSRSLYIMCHIPV
FCWISATVLERMLGEAESGEVPKTLTQMFTHFLIFQIKHKDQKYHQKCDPDPQQTRESIL
ALGKLAFQQLEKGNLIFYEEDLRECGIDVGEVAVYSGVCTQIFREEFRLHLGKVFSFVHL
SVQEFLAALYTFLHFIFRKTNVLVEQRTGLFHFFSKSTMSDFLRSAVDKPLQSENGHLDL
FLRFLLGLSLESNQALLRGLMPQTGSSSHSKQETVEYIKEKIRENPSPEKSINLFHCLNE
LNDHSLVQEVQTYLNRGGERRLRGTRLSPAQWSALVFVLLNSDQELDEFDLRKYDRSEEC
LLKLLPVVKASRKAELWGCNLTEESCRVLSSVLSSNSSRLRELNLSNNKLQDSGVKLLSA
GLENPHCTLETLRLWRCNLTEESCRVLSSVLSSNSSRLRELDLSNNNLQDSGVKLLSAGL
ENPHCTLEILRLRECNLTEESCRVLSSVFSSNSSRLRELDLSNNKLQDSGVELLSAGLEN
PHCTLETLSMYKCSITDEGCAALASALRSNSSSHLRELNLNWNNPIKSGVKLLSDLLKDP
HCKLETLY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaacatgagtgtgtctggagaccaggacttaaagaaagacgagagaatgatg
gagggaaagagatcagactcaccagaacccagctgtgtgtccatgaagagtgactggtca
agggaacttccatataacttcagagacggagccagttctcctgatgtgagaccacaaaag
aagaaatcaaacatcagcagaaatcagctggactccatattcaaggagctggaacacaaa
gtcatcactctgataaagaatgagctgaagaggtttaggaagctcctgagtccagattac
ccagcatgcactgagagggaggtggaggatgaggaggatctgcacagtgtcagagaggga
gcgctgaagatcacactgcacatcctgaataacatgaaccacacagatctcgctaacaca
ctgcacaacaagtctgtggcccctgtgtgtcagacagagctgaaatccagcctgagagag
aagtttaaaagaattaatgaaggaatctcacagcatggaagctcagcacttctgaatgag
atctatacagagctctacatcacagagggttggagtggagacaccaataatgaacatgag
gtgagacagattgagacagcgtccaggagaccagcaatacaggagacacccatcaaatgt
aacgagctctttaaagacaagtccatcagaagagtgctgactaaaggagttgctggaatt
ggaaaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcag
gacgtcaccttcatgtttccacttccctttcgagagctgaatctgatgaagcagagaaat
ctcagtctgatggagcttcttcatcactttttcccagaaatgagaaaactagaattacta
gactcctacacagtggtgttgatctttgatggtctggatgagtgtcgacttcctctaaat
ttccagaagaatgagagattgtgtgatgtgacagggtcagcctcggtggatgtgctgctg
acaaacctcatcaaggggaatctgcttccctctgctctcctttggataacctctcgacca
ggagcagccaatcagatccctcctgagtgtatagaccaggtaactgaggtacgaggcttc
agtgatcctcagaaagaggagtacttcaggaagaggatcagtgatcagagcctggccaat
aaaatcatcacacgcatgaagtcttcaagaagcctctacatcatgtgccacatcccagtc
ttctgctggatctcagccactgttctagagagaatgttgggtgaagctgagagtggagag
gtccccaagactctgactcaaatgttcacacacttcctgatctttcagatcaaacacaag
gaccaaaagtaccatcagaaatgtgaccctgatcctcagcagaccagagagagtatcctg
gcactggggaaactggctttccaacagctggagaaaggaaacctgatcttctatgaggaa
gacctgagagagtgtggcattgatgttggagaagttgcagtgtactcaggagtgtgtacc
caaatcttcagagaggagtttaggcttcacctggggaaggtgttcagctttgtacatctg
agtgttcaggagtttctggctgctttatacacatttctccactttatttttagaaagaca
aatgtgttagtggagcaacgcactggacttttccatttcttcagcaagtcaaccatgtca
gatttcctcaggagtgcagtggacaagccgttacagagtgagaatggacacctggacctg
ttcctccgcttccttctgggtctctcactggagtccaatcaggctctcttacgaggctta
atgccacagacaggaagcagctctcacagcaaacaggaaacagtcgagtacatcaaggag
aagatcagggagaatccgtctccagagaaatccatcaatctgttccactgtctgaatgaa
ctgaatgatcattctctagtgcaggaagtacagacttacctgaacagaggaggtgagcgt
cgtctcaggggaaccagactctctcctgctcagtggtcagctctggtgtttgtgttattg
aactcagatcaggagctggatgagtttgatttgaggaaatatgaccgatcagaggaatgt
cttctgaagctgctgccagtggtcaaagcctccagaaaagctgagctgtgggggtgtaat
ctgacagaggaaagctgtagagttctgtcctcagttctcagctcaaactcctccagactg
agagaactgaacctgagtaacaataaactgcaggattcaggagtgaagctgctctctgct
ggactggagaatccacactgtacactggagacactgaggctgtggaggtgtaatctgaca
gaggaaagctgtagagttctgtcctcagttctcagctcaaactcctccagactgagagaa
ctggacctgagtaacaataacctgcaggattcaggagtgaagctgctctctgctggactg
gagaatccacactgtacactggagatactgaggctgcgggagtgtaatttgacagaggaa
agctgtagagttctgtcttcagttttcagctcaaactcctccagactgagagaactggac
ctgagtaacaataaactgcaggattcaggagtggagctgctctctgctggactggagaat
ccacactgtacactggagacactgagcatgtataaatgcagtattacagatgaaggttgt
gctgctctggcttcagctctgaggtcaaactcctcatcacacctgagagaactgaatctg
aactggaataatccaataaaatcaggagtgaagctgctctctgatctactgaaggatcca
cactgtaaactggagacattatactga
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