KEGG   Ictalurus punctatus (channel catfish): 128632892
Entry
128632892         CDS       T04658                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    128632892
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    128632892
SSDB
Motif
Pfam: PRY SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 U-box zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-Nse zf-RING_10 Prok-RING_4 Perilipin DUF4200
Other DBs
NCBI-GeneID: 128632892
NCBI-ProteinID: XP_053536634
UniProt: A0A9F7R503
LinkDB
Position
6:444878..447881
AA seq 470 aa
MASKFSEEDFSCPVCCEIFKDPVLLRCSHSVCKVCLQKFWENKGSRECPVCRRKSSMEGP
PRNLALKNLCETFLQERSQRSSSASETVCSLHSEKLKLFCLDDQQPVCVVCQTSKIHTNH
KFCPIDEALTDCKEELKTALKPLQEKLKIFKDCKLNWSQTAEHIKIQAQHTERQIKEEFE
KLHQVLRDEEAARIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIRGVEEELRAEDISF
LQNYKATVRRAQCTLQHPEELSGPLIHVAKHLDNLKFRVWEKMQDAVQYTPVTLDPNTAH
PYLIVSDDLTSVRFSGEKQKLPDNPERFGDCWCVLGSEGFNSGTHCWDVEVGDCTEWDVG
VMTESAQRKRDIYVRSGIWCVVYFDGEYKTRSTTWPRTLLSVTQKLQRIRVQLDWNRGKL
SFSDPLTNTHIHTFTHTFTDKLLPLIDVACKKSPVKILPLQCSVRVNQIS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcttctaagttttcagaggaggatttctcttgtcctgtgtgctgtgaaatcttcaag
gatcctgttctcctgcgctgcagtcacagtgtgtgtaaagtgtgtttgcagaagttctgg
gagaacaaaggatccagagaatgtcctgtttgtaggaggaagtcgtctatggagggacct
cccagaaatctggccttaaagaacctgtgtgagactttcttacaggagagaagtcagaga
tcttcatcagcgtctgaaacagtctgcagtctgcacagtgagaaactcaaactcttctgt
ctggatgatcaacagccggtgtgtgtggtgtgtcagacttcaaaaatacacaccaaccat
aaattctgccccattgatgaggctttaacagactgtaaggaggagctgaaaactgctctg
aagcccctacaggagaaactgaagatctttaaagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacacacagagcggcagattaaggaggagtttgag
aagcttcaccaggttctacgagatgaagaggcagccaggatagctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcagaggcgtagaagaggagctgagagccgaagacatctcgttc
ttacaaaactacaaggccacagtgagaagagctcagtgcacactgcagcatccagaggag
ctttcaggaccactgatccatgtggcaaaacatctggacaacctgaagttcagagtctgg
gagaagatgcaggacgctgtccaatacacacctgtaactctggaccccaacactgctcat
ccttacctcattgtatctgatgatctgaccagtgtgagattcagtggtgagaaacagaag
cttcctgataatccagagagatttggtgattgttggtgtgtcctgggctctgagggcttt
aactcagggacacactgctgggacgttgaagtaggagactgtacagagtgggatgtgggt
gtgatgacagaatctgctcagaggaagagagatatatacgtcagaagtggaatctggtgt
gtggtgtattttgatggtgaatataaaacacgttctacaacatggccacgcactctcctc
tcagtaacacagaagctccagaggatcagagtgcagctggactggaacagaggaaagctg
tcgttctctgaccctctcactaacacacacatacacactttcacacacacatttactgat
aaattactgccacttatagatgttgcttgtaaaaaatctcctgtaaagatcctcccactt
cagtgctctgtaagagtgaatcagatcagttag

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