Ictalurus punctatus (channel catfish): 128632892
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Entry
128632892 CDS
T04658
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
128632892
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128632892
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
U-box
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-Nse
zf-RING_10
Prok-RING_4
Perilipin
DUF4200
Motif
Other DBs
NCBI-GeneID:
128632892
NCBI-ProteinID:
XP_053536634
UniProt:
A0A9F7R503
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All DBs
Position
6:444878..447881
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AA seq
470 aa
AA seq
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MASKFSEEDFSCPVCCEIFKDPVLLRCSHSVCKVCLQKFWENKGSRECPVCRRKSSMEGP
PRNLALKNLCETFLQERSQRSSSASETVCSLHSEKLKLFCLDDQQPVCVVCQTSKIHTNH
KFCPIDEALTDCKEELKTALKPLQEKLKIFKDCKLNWSQTAEHIKIQAQHTERQIKEEFE
KLHQVLRDEEAARIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIRGVEEELRAEDISF
LQNYKATVRRAQCTLQHPEELSGPLIHVAKHLDNLKFRVWEKMQDAVQYTPVTLDPNTAH
PYLIVSDDLTSVRFSGEKQKLPDNPERFGDCWCVLGSEGFNSGTHCWDVEVGDCTEWDVG
VMTESAQRKRDIYVRSGIWCVVYFDGEYKTRSTTWPRTLLSVTQKLQRIRVQLDWNRGKL
SFSDPLTNTHIHTFTHTFTDKLLPLIDVACKKSPVKILPLQCSVRVNQIS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaagttttcagaggaggatttctcttgtcctgtgtgctgtgaaatcttcaag
gatcctgttctcctgcgctgcagtcacagtgtgtgtaaagtgtgtttgcagaagttctgg
gagaacaaaggatccagagaatgtcctgtttgtaggaggaagtcgtctatggagggacct
cccagaaatctggccttaaagaacctgtgtgagactttcttacaggagagaagtcagaga
tcttcatcagcgtctgaaacagtctgcagtctgcacagtgagaaactcaaactcttctgt
ctggatgatcaacagccggtgtgtgtggtgtgtcagacttcaaaaatacacaccaaccat
aaattctgccccattgatgaggctttaacagactgtaaggaggagctgaaaactgctctg
aagcccctacaggagaaactgaagatctttaaagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacacacagagcggcagattaaggaggagtttgag
aagcttcaccaggttctacgagatgaagaggcagccaggatagctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcagaggcgtagaagaggagctgagagccgaagacatctcgttc
ttacaaaactacaaggccacagtgagaagagctcagtgcacactgcagcatccagaggag
ctttcaggaccactgatccatgtggcaaaacatctggacaacctgaagttcagagtctgg
gagaagatgcaggacgctgtccaatacacacctgtaactctggaccccaacactgctcat
ccttacctcattgtatctgatgatctgaccagtgtgagattcagtggtgagaaacagaag
cttcctgataatccagagagatttggtgattgttggtgtgtcctgggctctgagggcttt
aactcagggacacactgctgggacgttgaagtaggagactgtacagagtgggatgtgggt
gtgatgacagaatctgctcagaggaagagagatatatacgtcagaagtggaatctggtgt
gtggtgtattttgatggtgaatataaaacacgttctacaacatggccacgcactctcctc
tcagtaacacagaagctccagaggatcagagtgcagctggactggaacagaggaaagctg
tcgttctctgaccctctcactaacacacacatacacactttcacacacacatttactgat
aaattactgccacttatagatgttgcttgtaaaaaatctcctgtaaagatcctcccactt
cagtgctctgtaagagtgaatcagatcagttag
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