Ixodes scapularis (black-legged tick): 115315561
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Entry
115315561 CDS
T01131
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X2
KO
K14406
cleavage stimulation factor subunit 1
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115315561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
115315561
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115315561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CSTF1_dimer
ANAPC4_WD40
NBCH_WD40
VID27
PROPPIN
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
115315561
NCBI-ProteinID:
XP_029830594
EnsemblRapid:
LOC115315561
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MLNNTVSIKDRETLYRLIISQLFYDGHQTLAVSLSNMVKAHPACPPSDRLLNIVSAGLRT
EQETKGIKFSALDQPYTGPGIDLEYETEAPSLAPEPALYETCYVTSHKAQCRAGTFSRDG
QLVATGSADASIKILDVDRMLAKSAMPPEVAAQESAQQNMETHPVIRTLYDHIEEVTCLE
FHPREQILVSGSRDYTVKFFDYSKPSVKRAFKTIHEAEMVRTLAFHPSGDFILVGTQHPT
LRLYDVNTTQCFVSSVPSDQHKGPITTVRYNNSGKLYVSSSKDGDMKLWDGVSNKCICTF
PQAHDGNEVCSVYFSHNGKYVLSSGKDSIVKLWELSMSRCLIAYTGAGATGKQVHRAQGI
FNHSEDYVLFPDEKTTSLCSWDSRNAERQRLLSLGHNNTVRHLVHSPTGPAFLTCSDDFR
ARFWYRRVEAVD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaacaccgttagcatcaaagaccgcgaaacgctgtataggctcatcattagc
caactcttctacgatgggcaccagacgctcgccgtcagcctctccaacatggtcaaagct
catccagcttgtccgccgtctgaccgactgctcaacatcgtcagtgccgggctacgcact
gagcaggaaaccaaaggaatcaagttttcagcgctggaccagccttacacaggaccagga
atcgatctggagtatgaaactgaagctccatccttggcaccagaaccagcactgtacgaa
acctgttacgtgacgtcgcacaaggcgcagtgcagagccgggacgttcagtcgtgacggt
cagctggttgcaactggttctgctgatgcctctataaagatcttggacgtggaccgcatg
ctggccaagagtgccatgcctccggaggtagctgcacaagagtcggctcagcaaaacatg
gagacccacccggtcattcgtaccctgtacgaccacattgaggaggttacctgcctcgag
tttcatccaagagaacagatcctcgtttccggcagcagagactacacagtcaagttcttc
gactactccaagccctctgtcaagcgtgccttcaagacaattcatgaagctgagatggtt
cgcaccctggcattccacccctcgggcgacttcattcttgtgggaacccagcacccaaca
ttgcgactgtacgacgtcaacacaacccagtgcttcgtttcttcggtgccgtcggaccaa
cacaagggccccataactacggtccgctacaacaactcgggcaagctctatgtgtcatcg
tccaaggacggagacatgaagctgtgggacggagtaagcaacaaatgcatctgcacgttc
ccccaggcgcacgatgggaacgaagtctgctcagtctacttctcccacaacggcaagtat
gtgctgtccagtggcaaggactccattgtgaagctgtgggagctgtccatgtcccggtgc
ctgattgcctacactggggcaggagccacaggcaagcaggtccaccgtgcccagggcatc
ttcaaccactcggaagactatgtcctcttcccggacgaaaaaactacgagcctgtgcagc
tgggattccaggaatgcggaacgccagagactgctgtcactcggccacaacaacacggtg
cgacacttggtccactccccaacgggcccggccttcctgacctgcagcgacgatttcagg
gcacgcttctggtaccgcagggtcgaggcggtcgactag
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